NF0045250 | sentrin-specific protease 1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0045250OTHER0.9974780.0000110.002512
No Results

  • Fasta :-

    >NF0045250 MFEFLKNLKLPIWSSNERVQEPIKKRKRKETNENLSMNNQQKKIKNEQLQTSSGISAIAR PKKTTTNITNSMKEKQQKPTPSEEVMTLLISEEKKEYQKKISQVVEEEGTHFSSNHNRKQ LQQRKKDLTTIPTKLKQPEIIDLESEEDEITHEYKSLDLNYVKTHSESIHPHPSKHTNEA VKGVPHIPMEVPSIPVKTTPTQNKEIPPPVIRLGPPKLVSKSSKYKAKAEEDTTLLDNDS VERITKGLQSLLTLRDKVEETKVTKSFLERVTMQRASSKILTRLCEELLTEEAKKAYDTF LPQKIYDKILSEIISNTVETEKEFFPLSKKDETFVNNIFAQRNINRDEVLVDKYKIDITW QKIQCLKHTDWLNDEVINFYLNMVKDRNDKNPEKYPKIYIFNTFFYAKLTERHSYNYGNV RRWTRKIDLLEYDKIIIPIHLSVHWTLAVINIRDERFEYYDSMDGRQAGMNVLHNLQKYL SDEVLDKKQVSLDTMSWEKYIPHTPQQENGSDCGVFTCKFANFVAQDKPLTFSQKHMPYF RRRMVVEIVRSKEIL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0045250.fa Sequence name : NF0045250 Sequence length : 555 VALUES OF COMPUTED PARAMETERS Coef20 : 3.975 CoefTot : -0.390 ChDiff : 11 ZoneTo : 16 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.553 -0.005 0.655 MesoH : -1.413 -0.262 -0.705 0.031 MuHd_075 : 19.341 8.002 5.295 1.386 MuHd_095 : 30.014 17.929 7.891 6.383 MuHd_100 : 31.295 19.783 9.002 5.738 MuHd_105 : 24.705 17.808 8.379 3.662 Hmax_075 : 1.983 5.717 -1.821 2.250 Hmax_095 : 11.600 12.500 0.673 4.480 Hmax_100 : 16.200 14.400 2.210 5.380 Hmax_105 : 7.600 12.100 -0.335 3.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9703 0.0297 DFMC : 0.9537 0.0463
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 555 NF0045250 MFEFLKNLKLPIWSSNERVQEPIKKRKRKETNENLSMNNQQKKIKNEQLQTSSGISAIARPKKTTTNITNSMKEKQQKPT 80 PSEEVMTLLISEEKKEYQKKISQVVEEEGTHFSSNHNRKQLQQRKKDLTTIPTKLKQPEIIDLESEEDEITHEYKSLDLN 160 YVKTHSESIHPHPSKHTNEAVKGVPHIPMEVPSIPVKTTPTQNKEIPPPVIRLGPPKLVSKSSKYKAKAEEDTTLLDNDS 240 VERITKGLQSLLTLRDKVEETKVTKSFLERVTMQRASSKILTRLCEELLTEEAKKAYDTFLPQKIYDKILSEIISNTVET 320 EKEFFPLSKKDETFVNNIFAQRNINRDEVLVDKYKIDITWQKIQCLKHTDWLNDEVINFYLNMVKDRNDKNPEKYPKIYI 400 FNTFFYAKLTERHSYNYGNVRRWTRKIDLLEYDKIIIPIHLSVHWTLAVINIRDERFEYYDSMDGRQAGMNVLHNLQKYL 480 SDEVLDKKQVSLDTMSWEKYIPHTPQQENGSDCGVFTCKFANFVAQDKPLTFSQKHMPYFRRRMVVEIVRSKEIL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0045250 6 -MFEFLK|NL 0.054 . NF0045250 9 EFLKNLK|LP 0.052 . NF0045250 18 IWSSNER|VQ 0.092 . NF0045250 24 RVQEPIK|KR 0.060 . NF0045250 25 VQEPIKK|RK 0.086 . NF0045250 26 QEPIKKR|KR 0.136 . NF0045250 27 EPIKKRK|RK 0.124 . NF0045250 28 PIKKRKR|KE 0.147 . NF0045250 29 IKKRKRK|ET 0.447 . NF0045250 42 SMNNQQK|KI 0.089 . NF0045250 43 MNNQQKK|IK 0.174 . NF0045250 45 NQQKKIK|NE 0.066 . NF0045250 60 GISAIAR|PK 0.110 . NF0045250 62 SAIARPK|KT 0.071 . NF0045250 63 AIARPKK|TT 0.408 . NF0045250 73 NITNSMK|EK 0.065 . NF0045250 75 TNSMKEK|QQ 0.083 . NF0045250 78 MKEKQQK|PT 0.084 . NF0045250 94 LLISEEK|KE 0.058 . NF0045250 95 LISEEKK|EY 0.142 . NF0045250 99 EKKEYQK|KI 0.075 . NF0045250 100 KKEYQKK|IS 0.134 . NF0045250 118 FSSNHNR|KQ 0.125 . NF0045250 119 SSNHNRK|QL 0.124 . NF0045250 124 RKQLQQR|KK 0.088 . NF0045250 125 KQLQQRK|KD 0.076 . NF0045250 126 QLQQRKK|DL 0.181 . NF0045250 134 LTTIPTK|LK 0.060 . NF0045250 136 TIPTKLK|QP 0.065 . NF0045250 155 EITHEYK|SL 0.081 . NF0045250 163 LDLNYVK|TH 0.060 . NF0045250 175 IHPHPSK|HT 0.083 . NF0045250 182 HTNEAVK|GV 0.098 . NF0045250 197 VPSIPVK|TT 0.077 . NF0045250 204 TTPTQNK|EI 0.063 . NF0045250 212 IPPPVIR|LG 0.081 . NF0045250 217 IRLGPPK|LV 0.091 . NF0045250 221 PPKLVSK|SS 0.079 . NF0045250 224 LVSKSSK|YK 0.110 . NF0045250 226 SKSSKYK|AK 0.089 . NF0045250 228 SSKYKAK|AE 0.088 . NF0045250 243 DNDSVER|IT 0.080 . NF0045250 246 SVERITK|GL 0.119 . NF0045250 255 QSLLTLR|DK 0.078 . NF0045250 257 LLTLRDK|VE 0.060 . NF0045250 262 DKVEETK|VT 0.060 . NF0045250 265 EETKVTK|SF 0.070 . NF0045250 270 TKSFLER|VT 0.117 . NF0045250 275 ERVTMQR|AS 0.122 . NF0045250 279 MQRASSK|IL 0.068 . NF0045250 283 SSKILTR|LC 0.104 . NF0045250 294 LLTEEAK|KA 0.068 . NF0045250 295 LTEEAKK|AY 0.134 . NF0045250 304 DTFLPQK|IY 0.070 . NF0045250 308 PQKIYDK|IL 0.069 . NF0045250 322 NTVETEK|EF 0.057 . NF0045250 329 EFFPLSK|KD 0.066 . NF0045250 330 FFPLSKK|DE 0.088 . NF0045250 342 NNIFAQR|NI 0.088 . NF0045250 346 AQRNINR|DE 0.091 . NF0045250 353 DEVLVDK|YK 0.068 . NF0045250 355 VLVDKYK|ID 0.065 . NF0045250 362 IDITWQK|IQ 0.060 . NF0045250 367 QKIQCLK|HT 0.070 . NF0045250 385 FYLNMVK|DR 0.062 . NF0045250 387 LNMVKDR|ND 0.101 . NF0045250 390 VKDRNDK|NP 0.108 . NF0045250 394 NDKNPEK|YP 0.063 . NF0045250 397 NPEKYPK|IY 0.064 . NF0045250 408 NTFFYAK|LT 0.064 . NF0045250 412 YAKLTER|HS 0.081 . NF0045250 421 YNYGNVR|RW 0.087 . NF0045250 422 NYGNVRR|WT 0.170 . NF0045250 425 NVRRWTR|KI 0.274 . NF0045250 426 VRRWTRK|ID 0.081 . NF0045250 434 DLLEYDK|II 0.058 . NF0045250 453 LAVINIR|DE 0.082 . NF0045250 456 INIRDER|FE 0.157 . NF0045250 466 YDSMDGR|QA 0.173 . NF0045250 478 VLHNLQK|YL 0.085 . NF0045250 487 SDEVLDK|KQ 0.058 . NF0045250 488 DEVLDKK|QV 0.105 . NF0045250 499 DTMSWEK|YI 0.062 . NF0045250 519 CGVFTCK|FA 0.071 . NF0045250 528 NFVAQDK|PL 0.065 . NF0045250 535 PLTFSQK|HM 0.061 . NF0045250 541 KHMPYFR|RR 0.086 . NF0045250 542 HMPYFRR|RM 0.111 . NF0045250 543 MPYFRRR|MV 0.338 . NF0045250 550 MVVEIVR|SK 0.108 . NF0045250 552 VEIVRSK|EI 0.059 . ____________________________^_________________

  • Fasta :-

    >NF0045250 ATGTTTGAATTTTTGAAAAATCTGAAACTTCCTATCTGGAGTTCGAACGAACGAGTCCAA GAACCAATTAAAAAACGAAAACGAAAGGAAACAAACGAAAATTTATCAATGAATAATCAA CAGAAAAAGATCAAAAATGAGCAATTACAAACATCTTCGGGTATTTCTGCCATCGCACGG CCGAAGAAGACCACCACGAATATCACTAATTCTATGAAGGAAAAACAACAAAAACCAACT CCATCCGAAGAAGTTATGACCCTATTAATTTCTGAAGAAAAAAAAGAATATCAAAAGAAA ATTTCTCAAGTTGTGGAAGAAGAGGGAACCCATTTTTCAAGTAATCACAATCGGAAACAG TTGCAACAACGTAAGAAAGATTTAACAACCATACCGACGAAATTAAAGCAGCCAGAAATC ATAGATTTAGAAAGCGAGGAGGATGAAATTACTCACGAATACAAATCACTAGATTTGAAT TATGTCAAGACTCACTCAGAATCTATTCACCCTCATCCTTCCAAGCACACAAATGAGGCA GTTAAGGGTGTTCCGCACATACCAATGGAAGTACCCTCTATACCTGTAAAAACAACACCA ACACAAAACAAGGAAATACCACCTCCAGTGATCAGACTTGGCCCACCTAAATTGGTGTCA AAATCTTCCAAATATAAAGCCAAGGCTGAGGAAGATACAACTCTTTTGGACAACGATTCT GTTGAAAGAATTACGAAAGGCCTGCAGTCCTTGCTAACTTTACGAGATAAGGTAGAAGAA ACTAAAGTAACAAAGTCTTTCCTTGAACGAGTGACAATGCAGAGGGCCTCTTCAAAGATA TTAACCAGATTATGTGAAGAGCTATTGACAGAAGAGGCCAAGAAAGCATATGACACATTT CTTCCTCAAAAGATTTATGACAAGATACTTTCAGAGATAATTTCAAACACCGTAGAAACA GAAAAAGAATTTTTCCCACTCTCAAAGAAAGACGAGACATTTGTCAACAATATTTTTGCT CAAAGAAATATCAACCGAGATGAAGTTCTTGTGGACAAGTACAAAATTGATATTACATGG CAAAAGATTCAATGCTTAAAGCATACAGACTGGCTCAACGATGAAGTGATTAACTTTTAT CTCAACATGGTGAAAGATAGAAATGACAAAAATCCAGAAAAATATCCAAAAATTTACATT TTTAACACGTTCTTTTATGCCAAGCTAACAGAGCGCCATTCCTACAATTACGGTAACGTG AGGAGATGGACACGAAAAATTGACTTGTTAGAATATGACAAAATAATAATTCCTATTCAC TTGAGCGTGCATTGGACCCTAGCAGTGATTAATATAAGAGACGAAAGATTTGAATACTAT GACTCCATGGATGGAAGACAAGCTGGTATGAATGTGTTGCACAATTTGCAAAAATACCTA AGTGATGAGGTGTTGGACAAGAAGCAAGTTTCATTGGATACCATGTCCTGGGAGAAATAT ATTCCACATACACCACAACAAGAGAATGGATCTGATTGTGGAGTGTTCACATGCAAATTT GCCAATTTCGTTGCCCAAGACAAACCTTTAACTTTCTCTCAAAAGCACATGCCTTACTTT AGAAGAAGAATGGTTGTTGAAATTGTGAGGAGTAAAGAAATACTCTAG
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  • Fasta :-

    MFEFLKNLKLPIWSSNERVQEPIKKRKRKETNENLSMNNQQKKIKNEQLQTSSGISAIAR PKKTTTNITNSMKEKQQKPTPSEEVMTLLISEEKKEYQKKISQVVEEEGTHFSSNHNRKQ LQQRKKDLTTIPTKLKQPEIIDLESEEDEITHEYKSLDLNYVKTHSESIHPHPSKHTNEA VKGVPHIPMEVPSIPVKTTPTQNKEIPPPVIRLGPPKLVSKSSKYKAKAEEDTTLLDNDS VERITKGLQSLLTLRDKVEETKVTKSFLERVTMQRASSKILTRLCEELLTEEAKKAYDTF LPQKIYDKILSEIISNTVETEKEFFPLSKKDETFVNNIFAQRNINRDEVLVDKYKIDITW QKIQCLKHTDWLNDEVINFYLNMVKDRNDKNPEKYPKIYIFNTFFYAKLTERHSYNYGNV RRWTRKIDLLEYDKIIIPIHLSVHWTLAVINIRDERFEYYDSMDGRQAGMNVLHNLQKYL SDEVLDKKQVSLDTMSWEKYIPHTPQQENGSDCGVFTCKFANFVAQDKPLTFSQKHMPYF RRRMVVEIVRSKEIL

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0045250T2010.5980.465NF0045250T1980.5760.091NF0045250T1990.5700.250NF0045250T1770.5020.045
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0045250T2010.5980.465NF0045250T1980.5760.091NF0045250T1990.5700.250NF0045250T1770.5020.045
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0045250277 SMQRASSKIL0.992unspNF0045250277 SMQRASSKIL0.992unspNF0045250277 SMQRASSKIL0.992unspNF0045250278 SQRASSKILT0.995unspNF0045250328 SFFPLSKKDE0.996unspNF004525071 SNITNSMKEK0.994unspNF0045250145 SIDLESEEDE0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India