NF0046120 | oxidative-stress-resistance chaperone

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_IDPredictionOTHERSPmTPCS_Position
NF0046120OTHER0.8234140.1436630.032923
No Results

  • Fasta :-

    >NF0046120 MVSPRSSSRLMNALVCIATGSEEMEAVNIIDVLRRGNIQVTVAKVHDPQQHYDPSNLRVI GSRGVKLEADAHFDDVVDQEYGAIILPGGMGGAKIFSENTKLLNRLTKQKKSEHGIVAAI CASPALVLTKHNLLDGVKKVTCYPSLKDKMPHYDWHDEKVVVDGNVVTSQGPFTAVFFAL KLIELMVSKEASQEVAKGLLVH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0046120.fa Sequence name : NF0046120 Sequence length : 202 VALUES OF COMPUTED PARAMETERS Coef20 : 4.822 CoefTot : 0.719 ChDiff : 0 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.224 1.653 0.140 0.629 MesoH : -0.711 0.296 -0.450 0.203 MuHd_075 : 21.517 10.375 5.029 3.689 MuHd_095 : 32.674 18.686 5.867 7.047 MuHd_100 : 33.017 18.451 6.467 7.567 MuHd_105 : 32.456 17.717 7.111 7.951 Hmax_075 : 9.537 9.800 4.536 2.564 Hmax_095 : 13.738 16.012 2.830 4.883 Hmax_100 : 14.900 14.200 2.406 4.500 Hmax_105 : 13.100 13.400 4.326 4.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2091 0.7909 DFMC : 0.3172 0.6828 This protein is probably imported in chloroplast. f(Ser) = 0.2381 f(Arg) = 0.0952 CMi = 1.17096 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 202 NF0046120 MVSPRSSSRLMNALVCIATGSEEMEAVNIIDVLRRGNIQVTVAKVHDPQQHYDPSNLRVIGSRGVKLEADAHFDDVVDQE 80 YGAIILPGGMGGAKIFSENTKLLNRLTKQKKSEHGIVAAICASPALVLTKHNLLDGVKKVTCYPSLKDKMPHYDWHDEKV 160 VVDGNVVTSQGPFTAVFFALKLIELMVSKEASQEVAKGLLVH 240 ................................................................................ 80 ................................................................................ 160 .......................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0046120 5 --MVSPR|SS 0.199 . NF0046120 9 SPRSSSR|LM 0.091 . NF0046120 34 NIIDVLR|RG 0.074 . NF0046120 35 IIDVLRR|GN 0.164 . NF0046120 44 IQVTVAK|VH 0.073 . NF0046120 58 YDPSNLR|VI 0.076 . NF0046120 63 LRVIGSR|GV 0.122 . NF0046120 66 IGSRGVK|LE 0.105 . NF0046120 94 GGMGGAK|IF 0.065 . NF0046120 101 IFSENTK|LL 0.071 . NF0046120 105 NTKLLNR|LT 0.075 . NF0046120 108 LLNRLTK|QK 0.153 . NF0046120 110 NRLTKQK|KS 0.078 . NF0046120 111 RLTKQKK|SE 0.169 . NF0046120 130 PALVLTK|HN 0.058 . NF0046120 138 NLLDGVK|KV 0.060 . NF0046120 139 LLDGVKK|VT 0.075 . NF0046120 147 TCYPSLK|DK 0.080 . NF0046120 149 YPSLKDK|MP 0.075 . NF0046120 159 YDWHDEK|VV 0.077 . NF0046120 181 AVFFALK|LI 0.060 . NF0046120 189 IELMVSK|EA 0.072 . NF0046120 197 ASQEVAK|GL 0.074 . ____________________________^_________________

  • Fasta :-

    >NF0046120 ATGGTTTCACCTCGTTCTTCTTCCCGACTCATGAATGCCTTGGTGTGCATCGCTACAGGC TCGGAAGAGATGGAAGCAGTTAATATTATTGATGTTTTGAGAAGAGGAAATATTCAGGTT ACAGTTGCAAAAGTTCATGATCCACAACAACATTACGATCCATCCAATTTAAGAGTGATC GGATCTCGTGGTGTAAAACTCGAGGCTGATGCTCATTTTGATGATGTCGTGGATCAAGAG TATGGAGCAATCATCTTACCAGGTGGTATGGGAGGAGCCAAAATATTCTCTGAGAATACT AAATTGTTGAATCGATTGACCAAGCAGAAAAAGAGTGAACACGGAATTGTTGCTGCTATT TGCGCAAGTCCTGCTCTCGTATTGACCAAACATAACCTTTTGGATGGAGTGAAAAAGGTG ACTTGTTATCCATCTTTGAAAGACAAAATGCCACACTATGATTGGCATGATGAGAAGGTG GTCGTCGATGGAAATGTCGTGACATCACAAGGTCCATTCACTGCTGTATTTTTCGCTCTT AAGCTTATTGAGCTTATGGTTTCTAAGGAAGCCAGCCAAGAAGTTGCAAAGGGTTTGCTT GTACATTAG
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  • Fasta :-

    MVSPRSSSRLMNALVCIATGSEEMEAVNIIDVLRRGNIQVTVAKVHDPQQHYDPSNLRVI GSRGVKLEADAHFDDVVDQEYGAIILPGGMGGAKIFSENTKLLNRLTKQKKSEHGIVAAI CASPALVLTKHNLLDGVKKVTCYPSLKDKMPHYDWHDEKVVVDGNVVTSQGPFTAVFFAL KLIELMVSKEASQEVAKGLLVH

  • title: conserved cys residue
  • coordinates: C121
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India