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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0046120.fa
Sequence name : NF0046120
Sequence length : 202
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.822
CoefTot : 0.719
ChDiff : 0
ZoneTo : 21
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.224 1.653 0.140 0.629
MesoH : -0.711 0.296 -0.450 0.203
MuHd_075 : 21.517 10.375 5.029 3.689
MuHd_095 : 32.674 18.686 5.867 7.047
MuHd_100 : 33.017 18.451 6.467 7.567
MuHd_105 : 32.456 17.717 7.111 7.951
Hmax_075 : 9.537 9.800 4.536 2.564
Hmax_095 : 13.738 16.012 2.830 4.883
Hmax_100 : 14.900 14.200 2.406 4.500
Hmax_105 : 13.100 13.400 4.326 4.800
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.2091 0.7909
DFMC : 0.3172 0.6828
This protein is probably imported in chloroplast.
f(Ser) = 0.2381 f(Arg) = 0.0952 CMi = 1.17096
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
202 NF0046120
MVSPRSSSRLMNALVCIATGSEEMEAVNIIDVLRRGNIQVTVAKVHDPQQHYDPSNLRVIGSRGVKLEADAHFDDVVDQE 80
YGAIILPGGMGGAKIFSENTKLLNRLTKQKKSEHGIVAAICASPALVLTKHNLLDGVKKVTCYPSLKDKMPHYDWHDEKV 160
VVDGNVVTSQGPFTAVFFALKLIELMVSKEASQEVAKGLLVH 240
................................................................................ 80
................................................................................ 160
.......................................... 240
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0046120 5 --MVSPR|SS 0.199 .
NF0046120 9 SPRSSSR|LM 0.091 .
NF0046120 34 NIIDVLR|RG 0.074 .
NF0046120 35 IIDVLRR|GN 0.164 .
NF0046120 44 IQVTVAK|VH 0.073 .
NF0046120 58 YDPSNLR|VI 0.076 .
NF0046120 63 LRVIGSR|GV 0.122 .
NF0046120 66 IGSRGVK|LE 0.105 .
NF0046120 94 GGMGGAK|IF 0.065 .
NF0046120 101 IFSENTK|LL 0.071 .
NF0046120 105 NTKLLNR|LT 0.075 .
NF0046120 108 LLNRLTK|QK 0.153 .
NF0046120 110 NRLTKQK|KS 0.078 .
NF0046120 111 RLTKQKK|SE 0.169 .
NF0046120 130 PALVLTK|HN 0.058 .
NF0046120 138 NLLDGVK|KV 0.060 .
NF0046120 139 LLDGVKK|VT 0.075 .
NF0046120 147 TCYPSLK|DK 0.080 .
NF0046120 149 YPSLKDK|MP 0.075 .
NF0046120 159 YDWHDEK|VV 0.077 .
NF0046120 181 AVFFALK|LI 0.060 .
NF0046120 189 IELMVSK|EA 0.072 .
NF0046120 197 ASQEVAK|GL 0.074 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation