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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0052240.fa
Sequence name : NF0052240
Sequence length : 363
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.530
CoefTot : -1.921
ChDiff : 0
ZoneTo : 54
KR : 4
DE : 1
CleavSite : 30
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.941 0.994 0.227 0.496
MesoH : -0.843 0.059 -0.431 0.152
MuHd_075 : 40.452 20.869 9.605 8.820
MuHd_095 : 36.175 24.598 10.495 9.439
MuHd_100 : 30.921 24.780 11.233 7.730
MuHd_105 : 31.341 24.501 10.523 6.785
Hmax_075 : 12.900 10.800 0.677 5.270
Hmax_095 : 14.900 15.800 4.070 5.740
Hmax_100 : 18.600 15.700 2.857 5.740
Hmax_105 : 19.017 12.338 2.835 5.241
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0593 0.9407
DFMC : 0.1318 0.8682
This protein is probably imported in mitochondria.
f(Ser) = 0.0741 f(Arg) = 0.0556 CMi = 0.50125
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
363 NF0052240
MCGRSALSLAPPQFRNVASRQLGADMHQTVWIGQALFKPLYNFSMGGCLPIIYYDPTICDDDAEKLKISEASDSVKLTTI 80
MIKQENDQETSIKKEIKQEIKSEIKEEPKVKKEEELSLALPKIHGLHLRTMTWGLTSYTSDHHQLNSVKTLNARAETLQE 160
KPTFKRLLKNQRAILFVEGFYEWKSAPLNTGKKQPYYIHPKEKGTLMCFACLYDKQEPNATDGYNFTVITVEADEKFAHI 240
HDRMPAILTSASDIRKWLGIDPTDDVLSLLKTCDFSQHLSMYEVSDFVNSATNQSAKCIKPLKEIQHGKGSLHLYFKPAA 320
PKRVKDEMESSCSSRINGGDIPQSNIKEEEPETKKIKKEEQQV 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
........................................... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0052240 4 ---MCGR|SA 0.111 .
NF0052240 15 LAPPQFR|NV 0.101 .
NF0052240 20 FRNVASR|QL 0.205 .
NF0052240 38 IGQALFK|PL 0.065 .
NF0052240 65 CDDDAEK|LK 0.055 .
NF0052240 67 DDAEKLK|IS 0.071 .
NF0052240 76 EASDSVK|LT 0.083 .
NF0052240 83 LTTIMIK|QE 0.071 .
NF0052240 93 DQETSIK|KE 0.065 .
NF0052240 94 QETSIKK|EI 0.112 .
NF0052240 97 SIKKEIK|QE 0.075 .
NF0052240 101 EIKQEIK|SE 0.081 .
NF0052240 105 EIKSEIK|EE 0.056 .
NF0052240 109 EIKEEPK|VK 0.060 .
NF0052240 111 KEEPKVK|KE 0.061 .
NF0052240 112 EEPKVKK|EE 0.100 .
NF0052240 122 LSLALPK|IH 0.076 .
NF0052240 129 IHGLHLR|TM 0.119 .
NF0052240 149 HQLNSVK|TL 0.063 .
NF0052240 154 VKTLNAR|AE 0.084 .
NF0052240 161 AETLQEK|PT 0.062 .
NF0052240 165 QEKPTFK|RL 0.063 .
NF0052240 166 EKPTFKR|LL 0.172 .
NF0052240 169 TFKRLLK|NQ 0.147 .
NF0052240 172 RLLKNQR|AI 0.095 .
NF0052240 184 EGFYEWK|SA 0.071 .
NF0052240 192 APLNTGK|KQ 0.059 .
NF0052240 193 PLNTGKK|QP 0.088 .
NF0052240 201 PYYIHPK|EK 0.069 .
NF0052240 203 YIHPKEK|GT 0.080 .
NF0052240 215 FACLYDK|QE 0.056 .
NF0052240 236 TVEADEK|FA 0.077 .
NF0052240 243 FAHIHDR|MP 0.106 .
NF0052240 255 TSASDIR|KW 0.109 .
NF0052240 256 SASDIRK|WL 0.117 .
NF0052240 271 DVLSLLK|TC 0.054 .
NF0052240 297 ATNQSAK|CI 0.077 .
NF0052240 300 QSAKCIK|PL 0.083 .
NF0052240 303 KCIKPLK|EI 0.070 .
NF0052240 309 KEIQHGK|GS 0.066 .
NF0052240 317 SLHLYFK|PA 0.073 .
NF0052240 322 FKPAAPK|RV 0.075 .
NF0052240 323 KPAAPKR|VK 0.345 .
NF0052240 325 AAPKRVK|DE 0.064 .
NF0052240 335 ESSCSSR|IN 0.166 .
NF0052240 347 IPQSNIK|EE 0.067 .
NF0052240 354 EEEPETK|KI 0.077 .
NF0052240 355 EEPETKK|IK 0.076 .
NF0052240 357 PETKKIK|KE 0.071 .
NF0052240 358 ETKKIKK|EE 0.109 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation