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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0053860.fa
Sequence name : NF0053860
Sequence length : 605
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.105
CoefTot : 0.000
ChDiff : -16
ZoneTo : 1
KR : 0
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.688 1.188 0.243 0.529
MesoH : 0.452 0.196 -0.160 0.228
MuHd_075 : 4.783 4.302 1.685 1.420
MuHd_095 : 19.462 12.751 4.613 2.519
MuHd_100 : 17.870 4.300 3.301 1.325
MuHd_105 : 24.662 10.887 6.567 3.820
Hmax_075 : -3.000 2.400 -3.105 2.420
Hmax_095 : 2.200 5.200 -1.878 2.570
Hmax_100 : 1.900 2.600 -2.157 2.010
Hmax_105 : 6.400 6.067 -0.620 3.337
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9586 0.0414
DFMC : 0.9562 0.0438
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
605 NF0053860
MDFLDYIGFSTKDNNIPNESMKAANTIDFSETSSPIWLLGLMYQPCLICSDEQGGSMLDSSMMMSSMASSSSFTATGTEN 80
SSTTTATVSSLPSFANAPDQQQALPTNGSINQQSMYAQFQQQVSTTNNDDNSPKTPSKAKRSFFSMPKKKKTYTDTDLVK 160
IYHNKLQLESFLSDFESRFWFSYRKDFEPISSNPLPMEQIELQPVNSMGNLSSINSTGSGIISSQGSVLSSGASQNGDDT 240
PFLTGSFSNSPPHAQYYYNNSNSGNQSTKSSSSSSLSKLYRYVINYTAPTSDTGWGCMMRSGQMLLAQAFLTHYLGRNFR 320
LPTTDRTRGMYQIIQSWFYDLDACPYSIHKIARAGTYFGKKVGEWFGPSTIAYVLKLLVEQHLRGEFVVHVADQGGIYID 400
ELLAKCEYDYEEFSIDVNNVQKENTESIYPQIECIGPRLRVTKKWRPLIILIPLRLGLENFNTDYIPSIKKVFEIPQTLG 480
IMGGKPKSSLYFIGYHDNEVIYLDPHTTQKSSPKEETYHCKTPLKIPISKIDPSMALGFLCSTRQDFDEFCSLANQHLTH 560
RSHPLVCIREQKPQEKDLDVLSFDELSDENRKEPHDEEDDDIVFV 640
................................................................................ 80
............................................................P................... 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
............................................. 640
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1
Name Pos Context Score Pred
____________________________v_________________
NF0053860 12 YIGFSTK|DN 0.069 .
NF0053860 22 IPNESMK|AA 0.107 .
NF0053860 134 NDDNSPK|TP 0.073 .
NF0053860 138 SPKTPSK|AK 0.070 .
NF0053860 140 KTPSKAK|RS 0.064 .
NF0053860 141 TPSKAKR|SF 0.549 *ProP*
NF0053860 148 SFFSMPK|KK 0.059 .
NF0053860 149 FFSMPKK|KK 0.099 .
NF0053860 150 FSMPKKK|KT 0.129 .
NF0053860 151 SMPKKKK|TY 0.107 .
NF0053860 160 TDTDLVK|IY 0.065 .
NF0053860 165 VKIYHNK|LQ 0.060 .
NF0053860 178 LSDFESR|FW 0.122 .
NF0053860 184 RFWFSYR|KD 0.090 .
NF0053860 185 FWFSYRK|DF 0.092 .
NF0053860 269 SGNQSTK|SS 0.098 .
NF0053860 278 SSSSLSK|LY 0.073 .
NF0053860 281 SLSKLYR|YV 0.207 .
NF0053860 300 GWGCMMR|SG 0.128 .
NF0053860 317 LTHYLGR|NF 0.082 .
NF0053860 320 YLGRNFR|LP 0.175 .
NF0053860 326 RLPTTDR|TR 0.082 .
NF0053860 328 PTTDRTR|GM 0.095 .
NF0053860 350 CPYSIHK|IA 0.070 .
NF0053860 353 SIHKIAR|AG 0.122 .
NF0053860 360 AGTYFGK|KV 0.085 .
NF0053860 361 GTYFGKK|VG 0.096 .
NF0053860 376 TIAYVLK|LL 0.068 .
NF0053860 384 LVEQHLR|GE 0.082 .
NF0053860 405 IDELLAK|CE 0.069 .
NF0053860 422 DVNNVQK|EN 0.065 .
NF0053860 438 IECIGPR|LR 0.070 .
NF0053860 440 CIGPRLR|VT 0.082 .
NF0053860 443 PRLRVTK|KW 0.151 .
NF0053860 444 RLRVTKK|WR 0.093 .
NF0053860 446 RVTKKWR|PL 0.101 .
NF0053860 455 IILIPLR|LG 0.069 .
NF0053860 470 DYIPSIK|KV 0.078 .
NF0053860 471 YIPSIKK|VF 0.075 .
NF0053860 485 LGIMGGK|PK 0.062 .
NF0053860 487 IMGGKPK|SS 0.082 .
NF0053860 510 DPHTTQK|SS 0.102 .
NF0053860 514 TQKSSPK|EE 0.068 .
NF0053860 521 EETYHCK|TP 0.063 .
NF0053860 525 HCKTPLK|IP 0.059 .
NF0053860 530 LKIPISK|ID 0.060 .
NF0053860 544 GFLCSTR|QD 0.101 .
NF0053860 561 NQHLTHR|SH 0.092 .
NF0053860 569 HPLVCIR|EQ 0.104 .
NF0053860 572 VCIREQK|PQ 0.132 .
NF0053860 576 EQKPQEK|DL 0.075 .
NF0053860 591 ELSDENR|KE 0.083 .
NF0053860 592 LSDENRK|EP 0.081 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation