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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0057860.fa
Sequence name : NF0057860
Sequence length : 336
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.186
CoefTot : -0.914
ChDiff : 12
ZoneTo : 28
KR : 3
DE : 0
CleavSite : 22
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.812 1.165 0.145 0.529
MesoH : -0.155 0.080 -0.460 0.198
MuHd_075 : 26.558 25.979 8.605 6.464
MuHd_095 : 29.054 20.064 8.202 5.574
MuHd_100 : 23.572 13.741 5.312 4.423
MuHd_105 : 21.936 6.843 3.789 4.288
Hmax_075 : 22.050 24.850 4.376 7.980
Hmax_095 : 13.125 15.575 2.452 4.940
Hmax_100 : 6.100 14.000 -0.689 3.340
Hmax_105 : 14.100 14.000 0.424 4.860
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.1311 0.8689
DFMC : 0.4236 0.5764
This protein is probably imported in mitochondria.
f(Ser) = 0.0714 f(Arg) = 0.0357 CMi = 0.59524
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
336 NF0057860
MSANFISFKILNYTLLKPPRWNVFGFIHDGENLLKRRKFPTKRSNIFGKSKWINSLLQHNGTQFHSINFQLLNSSSMLSS 80
TWTIRTRTALNVSIGLYLLINVWNHHQMDPFFLFLWNKKTPSSSETTNPSQQHSPPNSNGNHHHQDANSQSSSMMNTSSN 160
NNNKPPKMKIIKVKPDGNCLFRVISMGLYHTEDYHLQLRLAAVEWMRSHLDTEIDKGLRLRHALILDGPGDNNNNSDIER 240
YYLRNMQCSGVWGDFNCIVALANCLQQPRVQFKIVILSRHNYGARRGNQKIESIVDVQPPSSRSTMNDVKDENVVTVWLA 320
FNQLNNHYDWIQIGTE 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................ 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0057860 9 ANFISFK|IL 0.064 .
NF0057860 17 LNYTLLK|PP 0.061 .
NF0057860 20 TLLKPPR|WN 0.101 .
NF0057860 35 DGENLLK|RR 0.051 .
NF0057860 36 GENLLKR|RK 0.173 .
NF0057860 37 ENLLKRR|KF 0.120 .
NF0057860 38 NLLKRRK|FP 0.072 .
NF0057860 42 RRKFPTK|RS 0.075 .
NF0057860 43 RKFPTKR|SN 0.281 .
NF0057860 49 RSNIFGK|SK 0.101 .
NF0057860 51 NIFGKSK|WI 0.072 .
NF0057860 85 SSTWTIR|TR 0.082 .
NF0057860 87 TWTIRTR|TA 0.086 .
NF0057860 118 FLFLWNK|KT 0.059 .
NF0057860 119 LFLWNKK|TP 0.094 .
NF0057860 164 SSNNNNK|PP 0.069 .
NF0057860 167 NNNKPPK|MK 0.076 .
NF0057860 169 NKPPKMK|II 0.081 .
NF0057860 172 PKMKIIK|VK 0.064 .
NF0057860 174 MKIIKVK|PD 0.102 .
NF0057860 182 DGNCLFR|VI 0.122 .
NF0057860 199 DYHLQLR|LA 0.078 .
NF0057860 207 AAVEWMR|SH 0.111 .
NF0057860 216 LDTEIDK|GL 0.056 .
NF0057860 219 EIDKGLR|LR 0.065 .
NF0057860 221 DKGLRLR|HA 0.086 .
NF0057860 240 NNSDIER|YY 0.100 .
NF0057860 244 IERYYLR|NM 0.086 .
NF0057860 269 NCLQQPR|VQ 0.077 .
NF0057860 273 QPRVQFK|IV 0.109 .
NF0057860 279 KIVILSR|HN 0.096 .
NF0057860 285 RHNYGAR|RG 0.099 .
NF0057860 286 HNYGARR|GN 0.192 .
NF0057860 290 ARRGNQK|IE 0.078 .
NF0057860 303 VQPPSSR|ST 0.115 .
NF0057860 310 STMNDVK|DE 0.071 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation