Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0058120.fa
Sequence name : NF0058120
Sequence length : 763
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.619
CoefTot : -1.877
ChDiff : 11
ZoneTo : 78
KR : 8
DE : 1
CleavSite : 75
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.029 2.065 0.416 0.686
MesoH : -0.233 0.602 -0.320 0.256
MuHd_075 : 34.169 19.292 7.735 7.731
MuHd_095 : 28.229 29.073 10.817 7.896
MuHd_100 : 34.689 32.280 11.900 9.474
MuHd_105 : 32.691 29.115 10.157 8.666
Hmax_075 : 15.100 18.200 2.011 4.220
Hmax_095 : 17.325 22.900 4.246 7.480
Hmax_100 : 18.600 22.900 4.246 7.480
Hmax_105 : 8.100 21.700 3.019 7.828
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.6455 0.3545
DFMC : 0.4339 0.5661
This protein is probably imported in chloroplast.
f(Ser) = 0.1538 f(Arg) = 0.0513 CMi = 1.08499
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
763 NF0058120
MLKYTTVWRGLHGVKHKFGTILKSRGVVLSSFGFTNYHHHHDNMIIPHGGSLSLFTSTSLTTSFRLFSQSSLSRTTLLDS 80
QKVAPEAPQVHSSSNNQKQSSNSNGEQENNKTTHKGFSFLKFLKKLIKYMTISVASVMGLLAVCLPPALMVDFKEEFEND 160
GYRAVLVALLDAYKDTWNIIARFTRSCYSIGKVMTIYRNLNKDFEPKFESISRNKRSDHEISSEEELQVLRDYVTTRRQA 240
NAKAAEILLDLCLHNGGAYVKAGQYIASLNYIMPKEITDILSVLQDKCQQHDFSVTEKILLEDLDRDYREIFSSFDTTPI 320
ASASIAQVHKATLRDGNQTVAVKIQHPDLIRIFKADLKTMQFLLFSTKLFFDFPFAWTLPEFERILLSELDFVNEAANCS 400
HFSQMFKDYPDNQIDAPRVHWNLTSKRILTMDFIEGCKINDLQALKSMNIDPKEVAKLLVDSYSIQTFIHGFVHSDIHVG 480
NLLVRRSEKNNKPQLIYLDHGCYKKLDEETRKDYCQLWKAAIFRDHENLKLYTEKFGIDGRFYPLFGLFLTFSNYMDKSS 560
SSMVDQRKNMTSEEAKKMFKQIRETFFPKSTHKAQDLFNIIEEMFRNMKLDLILLMRANVQLRSITRELGRPINRFAIMA 640
EYCLKGIHYERKNYEMPCIPHRESDQRRVAVTHVQPTPFFHQLTFDLFKFKLRLLVLDLAFVFFNLSMRILRYFNPSKYE 720
EAEDDRETSRVKRRLDRMKQQKKAMEEDVASSKEDIEDLSAQQ 800
................................................................................ 80
................................................................................ 160
........................P..............................P........................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
............P.............................. 800
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3
Name Pos Context Score Pred
____________________________v_________________
NF0058120 3 ----MLK|YT 0.067 .
NF0058120 9 KYTTVWR|GL 0.113 .
NF0058120 15 RGLHGVK|HK 0.060 .
NF0058120 17 LHGVKHK|FG 0.073 .
NF0058120 23 KFGTILK|SR 0.088 .
NF0058120 25 GTILKSR|GV 0.114 .
NF0058120 65 SLTTSFR|LF 0.091 .
NF0058120 74 SQSSLSR|TT 0.071 .
NF0058120 82 TLLDSQK|VA 0.064 .
NF0058120 98 SSSNNQK|QS 0.093 .
NF0058120 111 GEQENNK|TT 0.075 .
NF0058120 115 NNKTTHK|GF 0.064 .
NF0058120 121 KGFSFLK|FL 0.069 .
NF0058120 124 SFLKFLK|KL 0.063 .
NF0058120 125 FLKFLKK|LI 0.094 .
NF0058120 128 FLKKLIK|YM 0.068 .
NF0058120 154 ALMVDFK|EE 0.062 .
NF0058120 163 FENDGYR|AV 0.119 .
NF0058120 174 ALLDAYK|DT 0.073 .
NF0058120 182 TWNIIAR|FT 0.129 .
NF0058120 185 IIARFTR|SC 0.548 *ProP*
NF0058120 192 SCYSIGK|VM 0.060 .
NF0058120 198 KVMTIYR|NL 0.084 .
NF0058120 202 IYRNLNK|DF 0.088 .
NF0058120 207 NKDFEPK|FE 0.073 .
NF0058120 213 KFESISR|NK 0.071 .
NF0058120 215 ESISRNK|RS 0.067 .
NF0058120 216 SISRNKR|SD 0.780 *ProP*
NF0058120 231 EELQVLR|DY 0.082 .
NF0058120 237 RDYVTTR|RQ 0.087 .
NF0058120 238 DYVTTRR|QA 0.127 .
NF0058120 243 RRQANAK|AA 0.110 .
NF0058120 261 NGGAYVK|AG 0.057 .
NF0058120 275 LNYIMPK|EI 0.085 .
NF0058120 287 LSVLQDK|CQ 0.061 .
NF0058120 298 DFSVTEK|IL 0.065 .
NF0058120 306 LLEDLDR|DY 0.111 .
NF0058120 309 DLDRDYR|EI 0.205 .
NF0058120 330 SIAQVHK|AT 0.071 .
NF0058120 334 VHKATLR|DG 0.089 .
NF0058120 343 NQTVAVK|IQ 0.059 .
NF0058120 351 QHPDLIR|IF 0.084 .
NF0058120 354 DLIRIFK|AD 0.109 .
NF0058120 358 IFKADLK|TM 0.056 .
NF0058120 368 FLLFSTK|LF 0.060 .
NF0058120 384 TLPEFER|IL 0.090 .
NF0058120 407 HFSQMFK|DY 0.082 .
NF0058120 418 NQIDAPR|VH 0.073 .
NF0058120 426 HWNLTSK|RI 0.068 .
NF0058120 427 WNLTSKR|IL 0.145 .
NF0058120 438 DFIEGCK|IN 0.053 .
NF0058120 446 NDLQALK|SM 0.063 .
NF0058120 453 SMNIDPK|EV 0.097 .
NF0058120 457 DPKEVAK|LL 0.073 .
NF0058120 485 VGNLLVR|RS 0.083 .
NF0058120 486 GNLLVRR|SE 0.177 .
NF0058120 489 LVRRSEK|NN 0.151 .
NF0058120 492 RSEKNNK|PQ 0.069 .
NF0058120 504 LDHGCYK|KL 0.072 .
NF0058120 505 DHGCYKK|LD 0.086 .
NF0058120 511 KLDEETR|KD 0.082 .
NF0058120 512 LDEETRK|DY 0.101 .
NF0058120 519 DYCQLWK|AA 0.062 .
NF0058120 524 WKAAIFR|DH 0.114 .
NF0058120 530 RDHENLK|LY 0.064 .
NF0058120 535 LKLYTEK|FG 0.076 .
NF0058120 541 KFGIDGR|FY 0.075 .
NF0058120 558 FSNYMDK|SS 0.097 .
NF0058120 567 SSMVDQR|KN 0.133 .
NF0058120 568 SMVDQRK|NM 0.088 .
NF0058120 576 MTSEEAK|KM 0.085 .
NF0058120 577 TSEEAKK|MF 0.160 .
NF0058120 580 EAKKMFK|QI 0.066 .
NF0058120 583 KMFKQIR|ET 0.108 .
NF0058120 589 RETFFPK|ST 0.116 .
NF0058120 593 FPKSTHK|AQ 0.061 .
NF0058120 606 IIEEMFR|NM 0.066 .
NF0058120 609 EMFRNMK|LD 0.082 .
NF0058120 617 DLILLMR|AN 0.077 .
NF0058120 623 RANVQLR|SI 0.200 .
NF0058120 627 QLRSITR|EL 0.099 .
NF0058120 631 ITRELGR|PI 0.091 .
NF0058120 635 LGRPINR|FA 0.129 .
NF0058120 645 MAEYCLK|GI 0.072 .
NF0058120 651 KGIHYER|KN 0.079 .
NF0058120 652 GIHYERK|NY 0.084 .
NF0058120 662 MPCIPHR|ES 0.116 .
NF0058120 667 HRESDQR|RV 0.120 .
NF0058120 668 RESDQRR|VA 0.225 .
NF0058120 689 LTFDLFK|FK 0.059 .
NF0058120 691 FDLFKFK|LR 0.058 .
NF0058120 693 LFKFKLR|LL 0.075 .
NF0058120 709 FFNLSMR|IL 0.086 .
NF0058120 712 LSMRILR|YF 0.268 .
NF0058120 718 RYFNPSK|YE 0.070 .
NF0058120 726 EEAEDDR|ET 0.087 .
NF0058120 730 DDRETSR|VK 0.079 .
NF0058120 732 RETSRVK|RR 0.055 .
NF0058120 733 ETSRVKR|RL 0.670 *ProP*
NF0058120 734 TSRVKRR|LD 0.215 .
NF0058120 737 VKRRLDR|MK 0.330 .
NF0058120 739 RRLDRMK|QQ 0.074 .
NF0058120 742 DRMKQQK|KA 0.092 .
NF0058120 743 RMKQQKK|AM 0.109 .
NF0058120 753 EDVASSK|ED 0.061 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation