Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0059180.fa
Sequence name : NF0059180
Sequence length : 268
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.834
CoefTot : -0.757
ChDiff : -2
ZoneTo : 17
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.324 1.865 0.136 0.715
MesoH : -0.476 0.405 -0.286 0.252
MuHd_075 : 34.609 17.932 8.052 7.494
MuHd_095 : 9.947 8.114 3.258 1.431
MuHd_100 : 8.388 3.576 1.305 0.563
MuHd_105 : 10.776 1.836 2.547 1.395
Hmax_075 : 8.800 7.600 -0.608 4.270
Hmax_095 : 2.200 6.100 -2.404 2.880
Hmax_100 : -2.600 3.600 -3.648 1.670
Hmax_105 : 7.233 3.967 -1.550 3.698
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9388 0.0612
DFMC : 0.9530 0.0470
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
268 NF0059180
MNARNMWMNNIVIKWNGDDINYDSHWTIVLIIIIIINTNIRPYFFDDSFQHRDPIVTGTSILGIRYNGGVMLCSDTLGSY 80
GSLARFRSIERIKKIGSNTIVGASGEYSDFQYITDLLEQLVDRDYCADDKIETSPKAIYQYLVRIMYNRRNRFNPLWNTL 160
IVAGFKDGKSFLGYTDLLGSNFEDDTMASGYGAYLAKPILRNFLDSKNGDVNNISEQEAREVLEKCMKVLYYRDARSLNK 240
IQIATATASGLTISEPYSLQTEWAFKGF 320
................................................................................ 80
................................................................................ 160
................................................................................ 240
............................ 320
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0059180 4 ---MNAR|NM 0.083 .
NF0059180 14 MNNIVIK|WN 0.092 .
NF0059180 41 IINTNIR|PY 0.076 .
NF0059180 52 DDSFQHR|DP 0.131 .
NF0059180 65 TSILGIR|YN 0.123 .
NF0059180 85 SYGSLAR|FR 0.095 .
NF0059180 87 GSLARFR|SI 0.188 .
NF0059180 91 RFRSIER|IK 0.077 .
NF0059180 93 RSIERIK|KI 0.072 .
NF0059180 94 SIERIKK|IG 0.216 .
NF0059180 123 LEQLVDR|DY 0.109 .
NF0059180 130 DYCADDK|IE 0.051 .
NF0059180 136 KIETSPK|AI 0.079 .
NF0059180 144 IYQYLVR|IM 0.073 .
NF0059180 149 VRIMYNR|RN 0.081 .
NF0059180 150 RIMYNRR|NR 0.099 .
NF0059180 152 MYNRRNR|FN 0.218 .
NF0059180 166 LIVAGFK|DG 0.061 .
NF0059180 169 AGFKDGK|SF 0.071 .
NF0059180 197 YGAYLAK|PI 0.068 .
NF0059180 201 LAKPILR|NF 0.088 .
NF0059180 207 RNFLDSK|NG 0.061 .
NF0059180 220 ISEQEAR|EV 0.120 .
NF0059180 225 AREVLEK|CM 0.058 .
NF0059180 228 VLEKCMK|VL 0.056 .
NF0059180 233 MKVLYYR|DA 0.110 .
NF0059180 236 LYYRDAR|SL 0.488 .
NF0059180 240 DARSLNK|IQ 0.058 .
NF0059180 266 QTEWAFK|GF 0.066 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation