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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0059840.fa
Sequence name : NF0059840
Sequence length : 922
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.650
CoefTot : -0.154
ChDiff : -9
ZoneTo : 53
KR : 5
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.300 2.476 0.529 0.902
MesoH : -0.455 0.415 -0.363 0.244
MuHd_075 : 29.158 15.425 6.792 6.347
MuHd_095 : 27.080 20.920 7.942 6.224
MuHd_100 : 28.624 21.131 8.868 5.626
MuHd_105 : 24.346 17.485 8.213 4.262
Hmax_075 : 11.900 8.500 0.822 5.350
Hmax_095 : 17.300 14.900 4.596 3.841
Hmax_100 : 18.700 21.200 5.338 6.440
Hmax_105 : 18.200 21.100 5.302 6.310
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3374 0.6626
DFMC : 0.3229 0.6771
This protein is probably imported in mitochondria.
f(Ser) = 0.1132 f(Arg) = 0.0377 CMi = 0.92166
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
922 NF0059840
MMVNSSASSALQRKTLNLIYYCSIALFGFIFILLASWGAYRLQFAGKGKPIIQDEFPYRLPDNISPTHYDIQLELQADNS 80
ATFNGRVSIYLKVIEATKTIVLSAEELQFVALIKANADQKNEHNKTGIVPSVNGKIEGVSLVNSKTNAAMELTGFSTADL 160
VKYRKIQVYSKQALEKNGQYSLTIDYIGLIRNDMRGFYQSKAADGSLVLSTQMESEDGRAAIPLFDEPRFKATFQMTITT 240
PVKNDKTRILFNTDEISRSTLSDGRVKVKFDKTPLMSTYLIAFIIGQYDYIEKSADGIRHRIYTPVGKEEQGRDALEAAV 320
KITKFFTDLYGVKYPINKMDQIAIPSFASGAMENFGLITYRETYLLFDNATASQSDKENGIEVVSHEISHQWNGNIITCA 400
YWTQLYLNEGFATFMETYALDKTYPSWKRGLKKLTNSVIYAADADSVASADPIVREYKKIQSKDEIDGLFNSITYDKGGA 480
ILNMFFNYLGEETFVKWMRQYFAKYQYQNTNTTQLLELLPVSDVKGTAEKFSTWLYQAGMPIINVIKEADGSLTLTQRRF 560
FSYSSQVEQFKNSKWWIPLTYVTEIDDDAEVKRIEFPASQTSLKITDKAVKFNHHKNGFYRVNYPKSMWTDLISNIKEFD 640
TQDRFDLFNDLFSIATSTVETIESSLMFDMLLALKEDETSILWESMYQSVLKLNQLLAGESVSLSFSRMVLDLVQKQYEK 720
IGWENRSSDDDDLAEQKEVRPFVLNLACRFGNVDCIDQALKRYHERNTTAIPPELRNVIYRTVVSKGGEREYYQVLEQFK 800
AEQDSVERTKLMYALAYSPSIPLLQNTLELSLSPLVKPQDSIFLIREVARNVPYGTDVAWNFVRSRYDAIVSKCGQDQVS 880
NRLVFGVGSLFNNLHYKQDIETFFGPRLQSISLMHYRNTLEA 960
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
................................................................................ 800
................................................................................ 880
.......................................... 960
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0059840 13 ASSALQR|KT 0.093 .
NF0059840 14 SSALQRK|TL 0.085 .
NF0059840 41 ASWGAYR|LQ 0.082 .
NF0059840 47 RLQFAGK|GK 0.084 .
NF0059840 49 QFAGKGK|PI 0.080 .
NF0059840 59 QDEFPYR|LP 0.099 .
NF0059840 86 SATFNGR|VS 0.072 .
NF0059840 92 RVSIYLK|VI 0.070 .
NF0059840 98 KVIEATK|TI 0.055 .
NF0059840 114 QFVALIK|AN 0.069 .
NF0059840 120 KANADQK|NE 0.062 .
NF0059840 125 QKNEHNK|TG 0.064 .
NF0059840 135 VPSVNGK|IE 0.084 .
NF0059840 145 VSLVNSK|TN 0.066 .
NF0059840 162 STADLVK|YR 0.065 .
NF0059840 164 ADLVKYR|KI 0.094 .
NF0059840 165 DLVKYRK|IQ 0.066 .
NF0059840 171 KIQVYSK|QA 0.070 .
NF0059840 176 SKQALEK|NG 0.067 .
NF0059840 191 DYIGLIR|ND 0.076 .
NF0059840 195 LIRNDMR|GF 0.109 .
NF0059840 201 RGFYQSK|AA 0.081 .
NF0059840 219 MESEDGR|AA 0.136 .
NF0059840 229 PLFDEPR|FK 0.105 .
NF0059840 231 FDEPRFK|AT 0.074 .
NF0059840 243 TITTPVK|ND 0.056 .
NF0059840 246 TPVKNDK|TR 0.061 .
NF0059840 248 VKNDKTR|IL 0.116 .
NF0059840 258 NTDEISR|ST 0.083 .
NF0059840 265 STLSDGR|VK 0.066 .
NF0059840 267 LSDGRVK|VK 0.061 .
NF0059840 269 DGRVKVK|FD 0.075 .
NF0059840 272 VKVKFDK|TP 0.058 .
NF0059840 293 QYDYIEK|SA 0.093 .
NF0059840 299 KSADGIR|HR 0.079 .
NF0059840 301 ADGIRHR|IY 0.112 .
NF0059840 308 IYTPVGK|EE 0.055 .
NF0059840 313 GKEEQGR|DA 0.138 .
NF0059840 321 ALEAAVK|IT 0.059 .
NF0059840 324 AAVKITK|FF 0.065 .
NF0059840 333 TDLYGVK|YP 0.065 .
NF0059840 338 VKYPINK|MD 0.069 .
NF0059840 361 FGLITYR|ET 0.081 .
NF0059840 377 TASQSDK|EN 0.093 .
NF0059840 422 ETYALDK|TY 0.056 .
NF0059840 428 KTYPSWK|RG 0.062 .
NF0059840 429 TYPSWKR|GL 0.192 .
NF0059840 432 SWKRGLK|KL 0.107 .
NF0059840 433 WKRGLKK|LT 0.124 .
NF0059840 455 SADPIVR|EY 0.084 .
NF0059840 458 PIVREYK|KI 0.112 .
NF0059840 459 IVREYKK|IQ 0.113 .
NF0059840 463 YKKIQSK|DE 0.087 .
NF0059840 477 NSITYDK|GG 0.060 .
NF0059840 496 GEETFVK|WM 0.064 .
NF0059840 499 TFVKWMR|QY 0.113 .
NF0059840 504 MRQYFAK|YQ 0.111 .
NF0059840 525 LPVSDVK|GT 0.075 .
NF0059840 530 VKGTAEK|FS 0.064 .
NF0059840 547 PIINVIK|EA 0.076 .
NF0059840 558 SLTLTQR|RF 0.074 .
NF0059840 559 LTLTQRR|FF 0.135 .
NF0059840 571 SQVEQFK|NS 0.064 .
NF0059840 574 EQFKNSK|WW 0.062 .
NF0059840 592 DDDAEVK|RI 0.060 .
NF0059840 593 DDAEVKR|IE 0.181 .
NF0059840 604 ASQTSLK|IT 0.078 .
NF0059840 608 SLKITDK|AV 0.072 .
NF0059840 611 ITDKAVK|FN 0.067 .
NF0059840 616 VKFNHHK|NG 0.061 .
NF0059840 621 HKNGFYR|VN 0.118 .
NF0059840 626 YRVNYPK|SM 0.089 .
NF0059840 637 DLISNIK|EF 0.062 .
NF0059840 644 EFDTQDR|FD 0.069 .
NF0059840 675 DMLLALK|ED 0.057 .
NF0059840 692 MYQSVLK|LN 0.059 .
NF0059840 708 VSLSFSR|MV 0.108 .
NF0059840 716 VLDLVQK|QY 0.067 .
NF0059840 720 VQKQYEK|IG 0.055 .
NF0059840 726 KIGWENR|SS 0.152 .
NF0059840 737 DDLAEQK|EV 0.067 .
NF0059840 740 AEQKEVR|PF 0.081 .
NF0059840 749 VLNLACR|FG 0.081 .
NF0059840 761 CIDQALK|RY 0.054 .
NF0059840 762 IDQALKR|YH 0.207 .
NF0059840 766 LKRYHER|NT 0.137 .
NF0059840 776 AIPPELR|NV 0.082 .
NF0059840 781 LRNVIYR|TV 0.192 .
NF0059840 786 YRTVVSK|GG 0.077 .
NF0059840 790 VSKGGER|EY 0.095 .
NF0059840 800 QVLEQFK|AE 0.059 .
NF0059840 808 EQDSVER|TK 0.062 .
NF0059840 810 DSVERTK|LM 0.061 .
NF0059840 837 SLSPLVK|PQ 0.075 .
NF0059840 846 DSIFLIR|EV 0.118 .
NF0059840 850 LIREVAR|NV 0.157 .
NF0059840 864 VAWNFVR|SR 0.139 .
NF0059840 866 WNFVRSR|YD 0.090 .
NF0059840 873 YDAIVSK|CG 0.069 .
NF0059840 882 QDQVSNR|LV 0.178 .
NF0059840 897 FNNLHYK|QD 0.074 .
NF0059840 907 ETFFGPR|LQ 0.088 .
NF0059840 917 ISLMHYR|NT 0.098 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation