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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0060530.fa
Sequence name : NF0060530
Sequence length : 421
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.652
CoefTot : -1.202
ChDiff : 5
ZoneTo : 50
KR : 8
DE : 0
CleavSite : 46
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.576 1.500 0.251 0.644
MesoH : 0.125 0.660 -0.139 0.341
MuHd_075 : 26.844 16.619 8.217 6.392
MuHd_095 : 36.882 25.490 12.594 8.186
MuHd_100 : 48.059 24.960 13.648 9.478
MuHd_105 : 53.685 26.709 14.515 10.519
Hmax_075 : 9.700 10.033 0.414 3.477
Hmax_095 : 16.200 14.612 3.779 4.883
Hmax_100 : 18.600 10.500 2.897 3.870
Hmax_105 : 17.675 11.300 3.057 3.929
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0145 0.9855
DFMC : 0.0111 0.9889
This protein is probably imported in mitochondria.
f(Ser) = 0.1400 f(Arg) = 0.0600 CMi = 0.90909
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
421 NF0060530
MKKMHRTTSLCSKAFKSFSSKIQIHTNLGIQQHVRLFHSNHFQRMTSTTIEPQVLFHDRSSEPSVQVITLNRPKALNSLN 80
LEMVRELTPRYEQLSSSNDPCKMIILKGTGDKAFCAGGDIKAIYESKDPKFFAEEYQLNYLIGSLYEKHKKVQIALLNGI 160
TMGGGVGLSVQPDTIRVATEKTVFAMPETAIGFFCDVGGSYFLPRIPIKGLGMYLALTGARLKGEQCVVAGIATHFVPSD 240
KLGELEELLVKLSREHNGLLSPQIIGSEITKHFPQDQYLNTSHAKSFLQHEKEISLFDPSVNPTVHDIIESLKKLNTHHA 320
EHTLKTLEQMSPTSLRVVHRQLRMGAVLGYKECFDMELGIAKHMMFGHDFFEGVRALLVDKDKNPKWNPPTLDQVKKKEI 400
DAYFEAFLTTSAKITQHNENA 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
..................... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0060530 2 -----MK|KM 0.061 .
NF0060530 3 ----MKK|MH 0.088 .
NF0060530 6 -MKKMHR|TT 0.083 .
NF0060530 13 TTSLCSK|AF 0.065 .
NF0060530 16 LCSKAFK|SF 0.122 .
NF0060530 21 FKSFSSK|IQ 0.071 .
NF0060530 35 GIQQHVR|LF 0.095 .
NF0060530 44 HSNHFQR|MT 0.164 .
NF0060530 59 QVLFHDR|SS 0.162 .
NF0060530 72 QVITLNR|PK 0.063 .
NF0060530 74 ITLNRPK|AL 0.061 .
NF0060530 85 LNLEMVR|EL 0.079 .
NF0060530 90 VRELTPR|YE 0.083 .
NF0060530 102 SSNDPCK|MI 0.085 .
NF0060530 107 CKMIILK|GT 0.085 .
NF0060530 112 LKGTGDK|AF 0.076 .
NF0060530 121 CAGGDIK|AI 0.066 .
NF0060530 127 KAIYESK|DP 0.060 .
NF0060530 130 YESKDPK|FF 0.076 .
NF0060530 148 IGSLYEK|HK 0.065 .
NF0060530 150 SLYEKHK|KV 0.092 .
NF0060530 151 LYEKHKK|VQ 0.098 .
NF0060530 176 VQPDTIR|VA 0.080 .
NF0060530 181 IRVATEK|TV 0.099 .
NF0060530 205 GSYFLPR|IP 0.147 .
NF0060530 209 LPRIPIK|GL 0.094 .
NF0060530 221 LALTGAR|LK 0.081 .
NF0060530 223 LTGARLK|GE 0.061 .
NF0060530 241 HFVPSDK|LG 0.062 .
NF0060530 251 LEELLVK|LS 0.054 .
NF0060530 254 LLVKLSR|EH 0.078 .
NF0060530 271 IGSEITK|HF 0.066 .
NF0060530 285 LNTSHAK|SF 0.102 .
NF0060530 292 SFLQHEK|EI 0.071 .
NF0060530 313 DIIESLK|KL 0.061 .
NF0060530 314 IIESLKK|LN 0.088 .
NF0060530 325 HAEHTLK|TL 0.076 .
NF0060530 336 MSPTSLR|VV 0.185 .
NF0060530 340 SLRVVHR|QL 0.137 .
NF0060530 343 VVHRQLR|MG 0.168 .
NF0060530 351 GAVLGYK|EC 0.064 .
NF0060530 362 MELGIAK|HM 0.065 .
NF0060530 375 DFFEGVR|AL 0.062 .
NF0060530 381 RALLVDK|DK 0.064 .
NF0060530 383 LLVDKDK|NP 0.064 .
NF0060530 386 DKDKNPK|WN 0.067 .
NF0060530 396 PTLDQVK|KK 0.056 .
NF0060530 397 TLDQVKK|KE 0.117 .
NF0060530 398 LDQVKKK|EI 0.246 .
NF0060530 413 FLTTSAK|IT 0.072 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation