NF0062180 | acetylornithine deacetylase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0062180SP0.4193830.5783340.002283CS pos: 42-43. VHS-EI. Pr: 0.4298
No Results

  • Fasta :-

    >NF0062180 MLKQGRPQQVQLAIPPMLIITGAILLLLLLLLVHHSDVVVHSEILPASQKIKNYLQQHRS DVKNLETFQRWVRYASLPEHEKDIQLDIAKYLKEELHFNKVDIWTMDQQKVELENSKFFN TPRNFDSLKKSPIVVGVLDGTAPEDLVETTQEGSIQNVASTKFKPYKSLIINGHIDVVPV GDPKQWYLENPFSGHINDSKIYGRGTTDMKGGLYSGLLAIEAIQKSLGVTNMKGKIIVHS VVEEESGGAGTVSTILRGYGHADAGIFPEPSNFLIFPQQQGSLWFRITVYGKSAHGGTRY DGISAIEKSQIVLNAIKKLEDERTDLIRNVLKNKLFENITIPVPINVGVIRGGEWPSSVP DFTVIEGRFGIIPNYETVEDAKQVLHDLVFKTIPELDKAHFSAYPCKLEFIGASWVPGYV PLEHEFVSQLSRSFSEVMGQNPIIASSPWATDAGYVNMMGNTPSVVFGPGVTHMAHQTNE YIPIDNIYKAAEIIALTIVEWCGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0062180.fa Sequence name : NF0062180 Sequence length : 504 VALUES OF COMPUTED PARAMETERS Coef20 : 3.601 CoefTot : -0.599 ChDiff : -10 ZoneTo : 36 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.606 3.206 0.572 0.994 MesoH : 0.098 0.360 -0.290 0.297 MuHd_075 : 15.106 16.479 4.372 4.330 MuHd_095 : 13.192 16.293 4.149 2.812 MuHd_100 : 13.206 14.180 4.138 2.994 MuHd_105 : 13.418 15.179 4.303 3.674 Hmax_075 : 10.617 24.033 5.164 5.565 Hmax_095 : 9.363 10.500 -0.280 3.369 Hmax_100 : 19.000 22.000 3.962 6.690 Hmax_105 : 16.700 19.800 3.586 6.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9947 0.0053 DFMC : 0.9917 0.0083
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 504 NF0062180 MLKQGRPQQVQLAIPPMLIITGAILLLLLLLLVHHSDVVVHSEILPASQKIKNYLQQHRSDVKNLETFQRWVRYASLPEH 80 EKDIQLDIAKYLKEELHFNKVDIWTMDQQKVELENSKFFNTPRNFDSLKKSPIVVGVLDGTAPEDLVETTQEGSIQNVAS 160 TKFKPYKSLIINGHIDVVPVGDPKQWYLENPFSGHINDSKIYGRGTTDMKGGLYSGLLAIEAIQKSLGVTNMKGKIIVHS 240 VVEEESGGAGTVSTILRGYGHADAGIFPEPSNFLIFPQQQGSLWFRITVYGKSAHGGTRYDGISAIEKSQIVLNAIKKLE 320 DERTDLIRNVLKNKLFENITIPVPINVGVIRGGEWPSSVPDFTVIEGRFGIIPNYETVEDAKQVLHDLVFKTIPELDKAH 400 FSAYPCKLEFIGASWVPGYVPLEHEFVSQLSRSFSEVMGQNPIIASSPWATDAGYVNMMGNTPSVVFGPGVTHMAHQTNE 480 YIPIDNIYKAAEIIALTIVEWCGV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0062180 3 ----MLK|QG 0.068 . NF0062180 6 -MLKQGR|PQ 0.085 . NF0062180 50 ILPASQK|IK 0.058 . NF0062180 52 PASQKIK|NY 0.080 . NF0062180 59 NYLQQHR|SD 0.125 . NF0062180 63 QHRSDVK|NL 0.072 . NF0062180 70 NLETFQR|WV 0.110 . NF0062180 73 TFQRWVR|YA 0.355 . NF0062180 82 SLPEHEK|DI 0.064 . NF0062180 90 IQLDIAK|YL 0.069 . NF0062180 93 DIAKYLK|EE 0.054 . NF0062180 100 EELHFNK|VD 0.061 . NF0062180 110 WTMDQQK|VE 0.053 . NF0062180 117 VELENSK|FF 0.059 . NF0062180 123 KFFNTPR|NF 0.091 . NF0062180 129 RNFDSLK|KS 0.065 . NF0062180 130 NFDSLKK|SP 0.107 . NF0062180 162 QNVASTK|FK 0.065 . NF0062180 164 VASTKFK|PY 0.071 . NF0062180 167 TKFKPYK|SL 0.123 . NF0062180 184 VPVGDPK|QW 0.063 . NF0062180 200 GHINDSK|IY 0.083 . NF0062180 204 DSKIYGR|GT 0.117 . NF0062180 210 RGTTDMK|GG 0.057 . NF0062180 225 AIEAIQK|SL 0.079 . NF0062180 233 LGVTNMK|GK 0.066 . NF0062180 235 VTNMKGK|II 0.075 . NF0062180 257 TVSTILR|GY 0.168 . NF0062180 286 QGSLWFR|IT 0.105 . NF0062180 292 RITVYGK|SA 0.110 . NF0062180 299 SAHGGTR|YD 0.122 . NF0062180 308 GISAIEK|SQ 0.075 . NF0062180 317 IVLNAIK|KL 0.065 . NF0062180 318 VLNAIKK|LE 0.084 . NF0062180 323 KKLEDER|TD 0.063 . NF0062180 328 ERTDLIR|NV 0.105 . NF0062180 332 LIRNVLK|NK 0.060 . NF0062180 334 RNVLKNK|LF 0.065 . NF0062180 351 INVGVIR|GG 0.090 . NF0062180 368 FTVIEGR|FG 0.077 . NF0062180 382 ETVEDAK|QV 0.070 . NF0062180 391 LHDLVFK|TI 0.061 . NF0062180 398 TIPELDK|AH 0.062 . NF0062180 407 FSAYPCK|LE 0.072 . NF0062180 432 FVSQLSR|SF 0.193 . NF0062180 489 PIDNIYK|AA 0.070 . ____________________________^_________________

  • Fasta :-

    >NF0062180 ATGTTGAAACAAGGTAGGCCTCAGCAAGTTCAACTTGCCATCCCACCAATGCTCATCATC ACTGGTGCGATACTACTGCTACTACTACTGCTGCTGGTTCATCATTCTGATGTTGTGGTT CATTCCGAAATTCTTCCAGCCTCTCAAAAGATTAAAAACTATTTACAACAACATCGTTCC GATGTTAAGAATTTAGAAACCTTCCAACGATGGGTCCGATACGCTTCTCTACCCGAACAT GAAAAAGATATTCAGCTTGATATTGCCAAATATTTGAAGGAGGAACTCCATTTCAACAAG GTTGATATTTGGACCATGGATCAACAAAAGGTTGAATTGGAAAATAGCAAATTCTTTAAT ACTCCTCGTAATTTTGATTCTTTGAAGAAGAGTCCTATTGTGGTTGGAGTCTTGGATGGA ACAGCTCCAGAAGATTTGGTAGAGACAACACAAGAAGGATCCATTCAAAATGTTGCATCC ACTAAATTTAAGCCATACAAATCTCTCATTATTAATGGACATATTGATGTCGTTCCAGTG GGTGATCCAAAACAATGGTATTTAGAAAATCCATTCAGTGGTCATATTAATGATTCCAAG ATTTATGGACGTGGAACGACCGATATGAAAGGAGGTCTCTATTCTGGTTTATTGGCCATT GAAGCTATTCAAAAATCTCTCGGTGTCACCAATATGAAAGGTAAAATTATTGTTCACAGT GTCGTTGAGGAGGAAAGTGGTGGCGCTGGTACTGTGAGTACCATCCTGCGTGGTTATGGA CATGCAGATGCAGGTATTTTTCCAGAGCCATCGAATTTCTTAATCTTTCCTCAACAACAA GGATCTTTGTGGTTCAGAATTACTGTCTATGGAAAGAGTGCACACGGTGGTACCAGATAT GATGGAATTAGTGCCATTGAAAAATCACAAATTGTCTTGAATGCAATCAAAAAGTTGGAA GATGAAAGAACCGATCTCATTCGAAATGTGCTCAAGAATAAGCTGTTCGAAAATATTACA ATTCCTGTTCCAATCAACGTTGGAGTTATTAGAGGAGGTGAATGGCCAAGCTCTGTACCT GATTTTACTGTGATTGAAGGAAGATTTGGCATTATTCCAAATTATGAAACTGTCGAGGAT GCCAAACAAGTGTTGCATGATTTGGTTTTCAAGACCATTCCTGAACTTGATAAGGCACAC TTCTCTGCTTATCCTTGTAAATTAGAATTTATTGGTGCTAGTTGGGTTCCAGGATATGTT CCATTGGAGCATGAATTTGTGAGTCAGTTATCAAGATCATTTAGCGAGGTCATGGGTCAA AATCCAATCATTGCTTCAAGTCCTTGGGCAACTGATGCAGGTTATGTGAACATGATGGGA AATACGCCTTCCGTAGTTTTTGGACCTGGTGTCACACACATGGCTCACCAAACCAACGAG TACATTCCAATTGATAATATTTACAAGGCAGCTGAGATTATTGCTTTGACCATTGTTGAG TGGTGTGGTGTTTGA
  • Download Fasta

  • Fasta :-

    MLKQGRPQQVQLAIPPMLIITGAILLLLLLLLVHHSDVVVHSEILPASQKIKNYLQQHRS DVKNLETFQRWVRYASLPEHEKDIQLDIAKYLKEELHFNKVDIWTMDQQKVELENSKFFN TPRNFDSLKKSPIVVGVLDGTAPEDLVETTQEGSIQNVASTKFKPYKSLIINGHIDVVPV GDPKQWYLENPFSGHINDSKIYGRGTTDMKGGLYSGLLAIEAIQKSLGVTNMKGKIIVHS VVEEESGGAGTVSTILRGYGHADAGIFPEPSNFLIFPQQQGSLWFRITVYGKSAHGGTRY DGISAIEKSQIVLNAIKKLEDERTDLIRNVLKNKLFENITIPVPINVGVIRGGEWPSSVP DFTVIEGRFGIIPNYETVEDAKQVLHDLVFKTIPELDKAHFSAYPCKLEFIGASWVPGYV PLEHEFVSQLSRSFSEVMGQNPIIASSPWATDAGYVNMMGNTPSVVFGPGVTHMAHQTNE YIPIDNIYKAAEIIALTIVEWCGV

  • title: metal binding site
  • coordinates: H174,D208,E244,E245,E269,H476
No Results
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No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India