NF0064770 | ring finger protein 5-like

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0064770	OTHER	0.999916	0.000061	0.000023

No Results

Fasta :-
>NF0064770 MRRLSTTTPPPMVPFMEENHHSSVSDPHDTTTLTTTTTSILNNTEISAEDDPIISDYVSE DEEENIGPTTSHDDVITTNPTNNTSSQNISNPNTLSTNMTLSSSPETTESSSSLPPQSST NVQSNSNPNTHSDVDSMWSCNICFDTANEPVITQCGHLYCWSCLYRWMQSHSTQNLQCPV CKAGIQQDKIIPIYGRGSSHSNRNVDSTSTDNHSTHNGIPSRPRAQYTDSRTTPNPNYNP FHNMGNLFGGGNFFGMGGGFGGAVGGGGIHASSSSSSIGTGASTFLFADAFRFFPFFDIQ YSGGGGGQSDGGLGMTTTSNSTRLHPPPSEQEEFQGFVRRLAFFFGFLLLFYIIFV
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0064770.fa Sequence name : NF0064770 Sequence length : 356 VALUES OF COMPUTED PARAMETERS Coef20 : 3.608 CoefTot : -0.508 ChDiff : -18 ZoneTo : 16 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.871 2.400 0.295 0.845 MesoH : 0.737 0.317 -0.066 0.393 MuHd_075 : 30.250 8.074 6.580 5.321 MuHd_095 : 39.926 21.781 8.606 6.890 MuHd_100 : 34.427 17.408 6.965 5.939 MuHd_105 : 17.447 7.493 2.893 3.448 Hmax_075 : 9.917 1.167 -0.492 2.893 Hmax_095 : 18.500 10.800 1.256 4.290 Hmax_100 : 18.500 10.800 1.256 3.990 Hmax_105 : 3.238 1.400 -2.034 2.048 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9527 0.0473 DFMC : 0.9609 0.0391

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 356 NF0064770 MRRLSTTTPPPMVPFMEENHHSSVSDPHDTTTLTTTTTSILNNTEISAEDDPIISDYVSEDEEENIGPTTSHDDVITTNP 80 TNNTSSQNISNPNTLSTNMTLSSSPETTESSSSLPPQSSTNVQSNSNPNTHSDVDSMWSCNICFDTANEPVITQCGHLYC 160 WSCLYRWMQSHSTQNLQCPVCKAGIQQDKIIPIYGRGSSHSNRNVDSTSTDNHSTHNGIPSRPRAQYTDSRTTPNPNYNP 240 FHNMGNLFGGGNFFGMGGGFGGAVGGGGIHASSSSSSIGTGASTFLFADAFRFFPFFDIQYSGGGGGQSDGGLGMTTTSN 320 STRLHPPPSEQEEFQGFVRRLAFFFGFLLLFYIIFV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0064770 2 -----MR|RL 0.097 . NF0064770 3 ----MRR|LS 0.128 . NF0064770 166 CWSCLYR|WM 0.088 . NF0064770 182 LQCPVCK|AG 0.075 . NF0064770 189 AGIQQDK|II 0.072 . NF0064770 196 IIPIYGR|GS 0.116 . NF0064770 203 GSSHSNR|NV 0.210 . NF0064770 222 HNGIPSR|PR 0.096 . NF0064770 224 GIPSRPR|AQ 0.086 . NF0064770 231 AQYTDSR|TT 0.070 . NF0064770 292 LFADAFR|FF 0.080 . NF0064770 323 TTSNSTR|LH 0.091 . NF0064770 339 EFQGFVR|RL 0.072 . NF0064770 340 FQGFVRR|LA 0.159 . ____________________________^_________________

Fasta :-
>NF0064770 ATGCGACGCTTATCGACCACAACTCCACCACCAATGGTTCCATTCATGGAAGAAAATCAT CATTCATCTGTTTCGGATCCTCACGATACAACCACATTAACCACTACAACCACATCAATA CTTAATAATACAGAAATATCAGCAGAGGATGATCCAATCATTTCGGATTATGTTTCCGAG GATGAAGAAGAAAACATTGGACCAACCACCTCTCATGATGATGTAATAACCACCAATCCT ACGAACAATACATCTTCTCAAAATATATCCAATCCTAACACATTATCTACCAACATGACT TTATCATCATCACCTGAAACCACAGAATCATCATCCTCACTTCCACCACAATCATCAACC AATGTACAGTCCAATTCCAATCCAAATACTCATTCAGATGTAGATTCCATGTGGTCATGT AATATTTGTTTTGATACAGCCAATGAACCAGTGATTACTCAATGTGGTCATTTGTATTGT TGGTCATGTCTTTATAGATGGATGCAAAGTCATTCTACTCAAAATTTACAATGTCCTGTT TGCAAAGCAGGTATTCAACAAGATAAAATAATTCCAATTTATGGAAGAGGAAGTAGTCAT TCGAATCGAAATGTGGATTCTACATCTACAGATAATCACTCCACTCATAATGGTATTCCT TCAAGACCTCGTGCACAATATACAGATTCTAGAACAACACCAAATCCAAATTATAATCCA TTTCATAATATGGGAAATTTATTTGGAGGAGGTAATTTCTTTGGAATGGGAGGAGGATTT GGAGGTGCTGTTGGTGGAGGAGGTATTCATGCAAGTAGTAGTAGTAGTAGTATTGGCACT GGAGCATCAACATTCTTATTTGCAGATGCATTTCGATTCTTTCCATTTTTTGATATTCAA TACAGTGGTGGTGGTGGTGGTCAGAGTGATGGTGGTTTAGGAATGACAACCACTTCCAAT TCGACTCGTTTACATCCACCTCCTTCTGAACAAGAAGAATTTCAGGGCTTTGTTCGACGA TTGGCATTCTTTTTTGGATTTTTATTGCTGTTCTACATTATATTTGTGTAG
Download Fasta

Fasta :-

MRRLSTTTPPPMVPFMEENHHSSVSDPHDTTTLTTTTTSILNNTEISAEDDPIISDYVSE DEEENIGPTTSHDDVITTNPTNNTSSQNISNPNTLSTNMTLSSSPETTESSSSLPPQSST NVQSNSNPNTHSDVDSMWSCNICFDTANEPVITQCGHLYCWSCLYRWMQSHSTQNLQCPV CKAGIQQDKIIPIYGRGSSHSNRNVDSTSTDNHSTHNGIPSRPRAQYTDSRTTPNPNYNP FHNMGNLFGGGNFFGMGGGFGGAVGGGGIHASSSSSSIGTGASTFLFADAFRFFPFFDIQ YSGGGGGQSDGGLGMTTTSNSTRLHPPPSEQEEFQGFVRRLAFFFGFLLLFYIIFV

title: Zn binding site
coordinates: C140,C143,C155,H157,C160,C163,C178,C181

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0064770	T	107	0.699	0.035	NF0064770	T	108	0.679	0.224	NF0064770	T	120	0.670	0.018	NF0064770	T	100	0.643	0.291	NF0064770	S	118	0.615	0.037	NF0064770	S	111	0.613	0.044	NF0064770	S	113	0.598	0.377	NF0064770	S	119	0.595	0.135	NF0064770	T	8	0.593	0.453	NF0064770	T	7	0.591	0.667	NF0064770	S	104	0.591	0.037	NF0064770	T	97	0.589	0.050	NF0064770	S	112	0.588	0.159	NF0064770	T	6	0.587	0.082	NF0064770	T	37	0.587	0.087	NF0064770	S	110	0.578	0.038	NF0064770	T	38	0.571	0.072	NF0064770	T	94	0.570	0.039	NF0064770	T	81	0.555	0.267	NF0064770	T	317	0.554	0.037	NF0064770	S	103	0.552	0.040	NF0064770	T	35	0.548	0.055	NF0064770	S	22	0.547	0.046	NF0064770	S	23	0.543	0.024	NF0064770	T	34	0.542	0.069	NF0064770	T	318	0.538	0.073	NF0064770	T	32	0.537	0.052	NF0064770	T	36	0.537	0.027	NF0064770	T	77	0.533	0.465	NF0064770	T	316	0.533	0.291	NF0064770	T	70	0.531	0.044	NF0064770	S	102	0.527	0.079	NF0064770	S	25	0.516	0.176	NF0064770	T	31	0.515	0.024	NF0064770	T	228	0.515	0.058	NF0064770	T	78	0.512	0.308	NF0064770	T	30	0.509	0.079	NF0064770	T	84	0.504	0.024	NF0064770	S	124	0.502	0.047	NF0064770	T	322	0.502	0.021

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0064770	T	107	0.699	0.035	NF0064770	T	108	0.679	0.224	NF0064770	T	120	0.670	0.018	NF0064770	T	100	0.643	0.291	NF0064770	S	118	0.615	0.037	NF0064770	S	111	0.613	0.044	NF0064770	S	113	0.598	0.377	NF0064770	S	119	0.595	0.135	NF0064770	T	8	0.593	0.453	NF0064770	T	7	0.591	0.667	NF0064770	S	104	0.591	0.037	NF0064770	T	97	0.589	0.050	NF0064770	S	112	0.588	0.159	NF0064770	T	6	0.587	0.082	NF0064770	T	37	0.587	0.087	NF0064770	S	110	0.578	0.038	NF0064770	T	38	0.571	0.072	NF0064770	T	94	0.570	0.039	NF0064770	T	81	0.555	0.267	NF0064770	T	317	0.554	0.037	NF0064770	S	103	0.552	0.040	NF0064770	T	35	0.548	0.055	NF0064770	S	22	0.547	0.046	NF0064770	S	23	0.543	0.024	NF0064770	T	34	0.542	0.069	NF0064770	T	318	0.538	0.073	NF0064770	T	32	0.537	0.052	NF0064770	T	36	0.537	0.027	NF0064770	T	77	0.533	0.465	NF0064770	T	316	0.533	0.291	NF0064770	T	70	0.531	0.044	NF0064770	S	102	0.527	0.079	NF0064770	S	25	0.516	0.176	NF0064770	T	31	0.515	0.024	NF0064770	T	228	0.515	0.058	NF0064770	T	78	0.512	0.308	NF0064770	T	30	0.509	0.079	NF0064770	T	84	0.504	0.024	NF0064770	S	124	0.502	0.047	NF0064770	T	322	0.502	0.021

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0064770	47 S	NTEISAEDD	0.995	unsp	NF0064770	47 S	NTEISAEDD	0.995	unsp	NF0064770	47 S	NTEISAEDD	0.995	unsp	NF0064770	59 S	SDYVSEDEE	0.996	unsp	NF0064770	104 S	TLSSSPETT	0.997	unsp	NF0064770	198 S	YGRGSSHSN	0.994	unsp	NF0064770	5 S	MRRLSTTTP	0.993	unsp	NF0064770	23 S	NHHSSVSDP	0.993	unsp

NF0064770 | ring finger protein 5-like

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

PDB

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India