NF0068180 | cysteine proteinase rd19a-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0068180SP0.0000870.9999090.000004CS pos: 20-21. VLA-QE. Pr: 0.8671
No Results

  • Fasta :-

    >NF0068180 MRSLLIAAVLLIACVGVVLAQEYKPLAESEMKKLFIKFSRKYAKVYGTEEHNNRYQIFKA NVEKSRYYNHVGKRENFGITKFSDLTPEEFKRMFLMKTYTPEEAKKILAAPQHAVLSEKE VQTAPTSFDWRQHGAVTRVKNQGACGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCD HNCVTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYEGVDDTCRFNKSNVAATI SSWTSISSDENQMAAWLAANGPISIAINAEWLQYYTSGISDPWFCNPQDLDHGVLIVGYG VGKSWLGSEENYWIVKNSWGSEKNEDGYFRIIRGKGKCGLNSVPSSSIV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0068180.fa Sequence name : NF0068180 Sequence length : 349 VALUES OF COMPUTED PARAMETERS Coef20 : 5.093 CoefTot : 1.016 ChDiff : 0 ZoneTo : 21 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.353 3.182 0.646 0.938 MesoH : -0.146 0.121 -0.331 0.286 MuHd_075 : 17.115 13.471 5.154 3.847 MuHd_095 : 14.164 5.854 2.520 3.343 MuHd_100 : 15.294 9.474 3.803 3.468 MuHd_105 : 16.252 11.496 4.248 3.207 Hmax_075 : 19.717 27.883 6.261 8.050 Hmax_095 : 16.700 21.500 4.911 6.900 Hmax_100 : 19.100 26.100 5.028 7.520 Hmax_105 : 17.800 24.100 5.384 6.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9818 0.0182 DFMC : 0.9893 0.0107
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 349 NF0068180 MRSLLIAAVLLIACVGVVLAQEYKPLAESEMKKLFIKFSRKYAKVYGTEEHNNRYQIFKANVEKSRYYNHVGKRENFGIT 80 KFSDLTPEEFKRMFLMKTYTPEEAKKILAAPQHAVLSEKEVQTAPTSFDWRQHGAVTRVKNQGACGSCWTFSTTGNVEGQ 160 WAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYEGVDDTCRFNKSNVAATI 240 SSWTSISSDENQMAAWLAANGPISIAINAEWLQYYTSGISDPWFCNPQDLDHGVLIVGYGVGKSWLGSEENYWIVKNSWG 320 SEKNEDGYFRIIRGKGKCGLNSVPSSSIV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0068180 2 -----MR|SL 0.122 . NF0068180 24 VLAQEYK|PL 0.068 . NF0068180 32 LAESEMK|KL 0.065 . NF0068180 33 AESEMKK|LF 0.097 . NF0068180 37 MKKLFIK|FS 0.072 . NF0068180 40 LFIKFSR|KY 0.108 . NF0068180 41 FIKFSRK|YA 0.108 . NF0068180 44 FSRKYAK|VY 0.106 . NF0068180 54 TEEHNNR|YQ 0.095 . NF0068180 59 NRYQIFK|AN 0.069 . NF0068180 64 FKANVEK|SR 0.079 . NF0068180 66 ANVEKSR|YY 0.126 . NF0068180 73 YYNHVGK|RE 0.067 . NF0068180 74 YNHVGKR|EN 0.221 . NF0068180 81 ENFGITK|FS 0.062 . NF0068180 91 LTPEEFK|RM 0.055 . NF0068180 92 TPEEFKR|MF 0.209 . NF0068180 97 KRMFLMK|TY 0.095 . NF0068180 105 YTPEEAK|KI 0.065 . NF0068180 106 TPEEAKK|IL 0.125 . NF0068180 119 HAVLSEK|EV 0.088 . NF0068180 131 PTSFDWR|QH 0.140 . NF0068180 138 QHGAVTR|VK 0.103 . NF0068180 140 GAVTRVK|NQ 0.074 . NF0068180 164 EGQWAIK|KG 0.055 . NF0068180 165 GQWAIKK|GK 0.096 . NF0068180 167 WAIKKGK|LV 0.109 . NF0068180 210 AFQYVIK|NG 0.065 . NF0068180 230 GVDDTCR|FN 0.078 . NF0068180 233 DTCRFNK|SN 0.209 . NF0068180 303 VGYGVGK|SW 0.084 . NF0068180 316 ENYWIVK|NS 0.066 . NF0068180 323 NSWGSEK|NE 0.068 . NF0068180 330 NEDGYFR|II 0.109 . NF0068180 333 GYFRIIR|GK 0.340 . NF0068180 335 FRIIRGK|GK 0.070 . NF0068180 337 IIRGKGK|CG 0.069 . ____________________________^_________________

  • Fasta :-

    >NF0068180 ATGCGTTCCTTGTTGATTGCTGCCGTTTTGTTGATTGCTTGTGTTGGTGTTGTGTTGGCT CAAGAGTACAAGCCTTTGGCCGAGAGTGAGATGAAGAAGCTCTTCATCAAGTTCTCCAGA AAGTATGCCAAGGTCTATGGTACTGAAGAACATAATAATAGATATCAAATTTTCAAGGCC AACGTTGAGAAGTCCAGATATTATAATCATGTTGGAAAGAGAGAAAACTTCGGTATCACC AAGTTCTCTGATTTGACCCCAGAAGAATTCAAGAGAATGTTCTTGATGAAGACTTACACT CCAGAGGAAGCCAAGAAGATTTTGGCTGCCCCACAACATGCCGTTCTTTCTGAAAAGGAA GTCCAAACTGCTCCAACCTCGTTCGACTGGAGACAACATGGAGCTGTTACTCGTGTCAAG AATCAAGGTGCTTGCGGTTCATGCTGGACTTTCTCCACCACTGGTAACGTTGAAGGTCAA TGGGCCATCAAGAAGGGTAAACTTGTCAGCTTATCCGAACAACAATTGGTTGACTGTGAT CACAACTGTGTCACTTATCAAAACCAACAAGCTTGCGACTCTGGTTGCAATGGTGGTTTG ATGTGGTCTGCTTTCCAATACGTTATCAAGAACGGTGGTTTGGACACTGAGGACTCTTAT CCATACGAAGGAGTTGATGACACTTGCCGATTCAACAAGAGCAACGTTGCTGCTACCATC TCCAGCTGGACATCTATTTCAAGTGATGAGAATCAAATGGCTGCTTGGCTCGCTGCTAAC GGACCAATCTCCATTGCTATCAATGCCGAATGGTTGCAATACTACACTTCTGGTATCTCT GATCCATGGTTCTGTAATCCTCAAGATTTGGACCACGGTGTTTTGATTGTTGGTTATGGT GTTGGTAAGAGCTGGCTCGGTTCTGAAGAGAATTATTGGATTGTTAAGAACTCTTGGGGT TCAGAAAAAAATGAAGATGGATATTTCCGTATTATTCGTGGTAAGGGCAAGTGCGGTTTG AACTCTGTTCCATCCTCCTCAATTGTTTAA
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  • Fasta :-

    MRSLLIAAVLLIACVGVVLAQEYKPLAESEMKKLFIKFSRKYAKVYGTEEHNNRYQIFKA NVEKSRYYNHVGKRENFGITKFSDLTPEEFKRMFLMKTYTPEEAKKILAAPQHAVLSEKE VQTAPTSFDWRQHGAVTRVKNQGACGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCD HNCVTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYEGVDDTCRFNKSNVAATI SSWTSISSDENQMAAWLAANGPISIAINAEWLQYYTSGISDPWFCNPQDLDHGVLIVGYG VGKSWLGSEENYWIVKNSWGSEKNEDGYFRIIRGKGKCGLNSVPSSSIV

  • title: active site
  • coordinates: Q142,C148,H292,N317
No Results
No Results
IDSitePeptideScoreMethod
NF0068180321 SNSWGSEKNE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India