NF0068410 | cysteine proteinase

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0068410	OTHER	0.999382	0.000123	0.000494

No Results

Fasta :-
>NF0068410 MMMDKEDVDSISKAIARVFYNLQKACDPPEEGHSYTGTVSTRCLIDSFGWSGNQVFEQHD IQEVARVLLDDLQQKMRNTSVSKSISQLFLGKVESGVECINVEFRSVKEETFYDIQLDVK GCRNIYESFKRYVKPEILSGQNKYHAEGYGLQDAKKYSNFTHLPKVLMLHLKRFDYTPLG TLQKVTDTYEFDDHINLTEFVKQKNGNKKEYSYSLHAVLIHKGSSVHSGHYVVAINVSED LHTKEWYLFDDEKATKISSFEAIQANYGGFNTAYMLVYLRYDAIAEITKPISSSEIPEKL REMLRHEDSSCTIL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0068410.fa Sequence name : NF0068410 Sequence length : 314 VALUES OF COMPUTED PARAMETERS Coef20 : 4.013 CoefTot : 0.000 ChDiff : -8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.529 0.782 -0.089 0.415 MesoH : -0.855 -0.013 -0.545 0.177 MuHd_075 : 17.104 6.503 3.835 3.126 MuHd_095 : 31.633 21.886 10.226 8.038 MuHd_100 : 28.112 22.174 9.026 7.517 MuHd_105 : 27.424 22.251 7.817 6.970 Hmax_075 : -7.933 3.150 -3.661 1.190 Hmax_095 : 5.200 12.600 0.644 4.080 Hmax_100 : 6.200 15.000 1.098 4.560 Hmax_105 : -1.750 12.338 -0.717 3.903 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5710 0.4290 DFMC : 0.7126 0.2874

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 314 NF0068410 MMMDKEDVDSISKAIARVFYNLQKACDPPEEGHSYTGTVSTRCLIDSFGWSGNQVFEQHDIQEVARVLLDDLQQKMRNTS 80 VSKSISQLFLGKVESGVECINVEFRSVKEETFYDIQLDVKGCRNIYESFKRYVKPEILSGQNKYHAEGYGLQDAKKYSNF 160 THLPKVLMLHLKRFDYTPLGTLQKVTDTYEFDDHINLTEFVKQKNGNKKEYSYSLHAVLIHKGSSVHSGHYVVAINVSED 240 LHTKEWYLFDDEKATKISSFEAIQANYGGFNTAYMLVYLRYDAIAEITKPISSSEIPEKLREMLRHEDSSCTIL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0068410 5 --MMMDK|ED 0.059 . NF0068410 13 DVDSISK|AI 0.056 . NF0068410 17 ISKAIAR|VF 0.093 . NF0068410 24 VFYNLQK|AC 0.068 . NF0068410 42 TGTVSTR|CL 0.124 . NF0068410 66 DIQEVAR|VL 0.099 . NF0068410 75 LDDLQQK|MR 0.060 . NF0068410 77 DLQQKMR|NT 0.108 . NF0068410 83 RNTSVSK|SI 0.101 . NF0068410 92 SQLFLGK|VE 0.065 . NF0068410 105 CINVEFR|SV 0.269 . NF0068410 108 VEFRSVK|EE 0.101 . NF0068410 120 DIQLDVK|GC 0.062 . NF0068410 123 LDVKGCR|NI 0.092 . NF0068410 130 NIYESFK|RY 0.058 . NF0068410 131 IYESFKR|YV 0.336 . NF0068410 134 SFKRYVK|PE 0.087 . NF0068410 143 ILSGQNK|YH 0.077 . NF0068410 155 YGLQDAK|KY 0.062 . NF0068410 156 GLQDAKK|YS 0.087 . NF0068410 165 NFTHLPK|VL 0.060 . NF0068410 172 VLMLHLK|RF 0.061 . NF0068410 173 LMLHLKR|FD 0.176 . NF0068410 184 PLGTLQK|VT 0.068 . NF0068410 202 NLTEFVK|QK 0.060 . NF0068410 204 TEFVKQK|NG 0.081 . NF0068410 208 KQKNGNK|KE 0.055 . NF0068410 209 QKNGNKK|EY 0.186 . NF0068410 222 HAVLIHK|GS 0.066 . NF0068410 244 SEDLHTK|EW 0.058 . NF0068410 253 YLFDDEK|AT 0.061 . NF0068410 256 DDEKATK|IS 0.061 . NF0068410 280 YMLVYLR|YD 0.081 . NF0068410 289 AIAEITK|PI 0.070 . NF0068410 299 SSEIPEK|LR 0.067 . NF0068410 301 EIPEKLR|EM 0.079 . NF0068410 305 KLREMLR|HE 0.084 . ____________________________^_________________

Fasta :-
>NF0068410 ATGATGATGGATAAGGAAGACGTTGATTCAATTTCAAAAGCAATTGCTCGAGTTTTTTAT AACTTACAAAAGGCATGTGACCCACCTGAAGAGGGACATTCATACACAGGAACAGTTTCT ACAAGATGTTTAATTGATAGTTTTGGTTGGAGTGGCAATCAAGTTTTTGAACAACACGAT ATTCAAGAAGTTGCTCGTGTGCTGCTTGACGATTTGCAGCAAAAGATGAGAAATACCTCT GTTTCAAAAAGTATTAGCCAACTCTTTTTAGGAAAAGTGGAAAGCGGAGTTGAGTGCATT AATGTTGAGTTTAGAAGTGTAAAAGAAGAAACATTCTATGACATACAGCTTGATGTAAAG GGATGTCGAAATATTTATGAATCATTCAAAAGATATGTAAAACCCGAAATTTTGTCAGGG CAAAACAAATATCATGCAGAGGGCTATGGGCTCCAAGATGCAAAGAAGTATTCAAACTTT ACACATTTACCAAAAGTACTCATGCTTCATCTGAAACGATTTGATTATACTCCATTGGGT ACCTTACAAAAGGTTACTGACACGTATGAATTTGATGACCACATCAATTTAACAGAGTTT GTAAAGCAAAAGAATGGAAATAAGAAGGAGTACTCTTATTCTCTCCATGCTGTGCTCATT CACAAAGGTTCAAGCGTACATAGTGGTCACTACGTTGTTGCAATTAATGTAAGCGAGGAT CTTCACACCAAAGAGTGGTATCTTTTCGATGATGAGAAAGCCACAAAAATATCATCCTTT GAGGCCATACAAGCAAATTATGGAGGATTTAATACCGCATACATGCTTGTTTATTTGAGA TATGATGCCATCGCAGAAATTACAAAACCAATTTCGTCAAGCGAAATTCCAGAAAAATTA CGAGAAATGTTACGACATGAAGACAGCTCATGTACAATCTTGTAG
Download Fasta

Fasta :-

MMMDKEDVDSISKAIARVFYNLQKACDPPEEGHSYTGTVSTRCLIDSFGWSGNQVFEQHD IQEVARVLLDDLQQKMRNTSVSKSISQLFLGKVESGVECINVEFRSVKEETFYDIQLDVK GCRNIYESFKRYVKPEILSGQNKYHAEGYGLQDAKKYSNFTHLPKVLMLHLKRFDYTPLG TLQKVTDTYEFDDHINLTEFVKQKNGNKKEYSYSLHAVLIHKGSSVHSGHYVVAINVSED LHTKEWYLFDDEKATKISSFEAIQANYGGFNTAYMLVYLRYDAIAEITKPISSSEIPEKL REMLRHEDSSCTIL

Ubiquitin carboxyl-terminal hydrolase, UCH

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0068410	128 S	NIYESFKRY	0.993	unsp	NF0068410	128 S	NIYESFKRY	0.993	unsp	NF0068410	128 S	NIYESFKRY	0.993	unsp	NF0068410	292 S	TKPISSSEI	0.996	unsp	NF0068410	80 S	MRNTSVSKS	0.991	unsp	NF0068410	106 S	VEFRSVKEE	0.991	unsp

NF0068410 | cysteine proteinase

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin carboxyl-terminal hydrolase, UCH

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India