NF0068990 | metalloendopeptidase zinc ion binding protein

_IDPredictionOTHERSPmTPCS_Position
NF0068990OTHER0.9995260.0002260.000248
No Results

  • Fasta :-

    >NF0068990 MEASFLHQEQELKKRKRSISTSQEVWSNLRIVFRLDYLGATDVETRTCIVKDQWYWDGIN TPTGQFPGTPACDSNTLTTNCWRKCTDEQVISDALISNIRDVLLPSLKQELSLTVQTRSV RDGDLTSFFSGMSRCGSRGGVPIPSDLKAKGFDGLNADIIIFVTTRPTDKGVLGWAVSCA SDAITKRPLAGQLNVSPSILSYSLKERMSVLIHESFHALGFSQAAMNTFYNSTLSRTMSF NEVGVAAKKTFVDNYGTTQSVDVNILKTPKVVEVGRSHYNCPTLTGIEMEEGGGQGTAFS HWEKRIMRNEIMVGSLGKEQLILSPFTLAYFEDSGWYKANFSRATRLLWGRDMGCKMASG RCEQWSQDTPTRTGYYCRDSSVSTCSYDLKSKGGCSITTHTQALGYYEHVAGSPRLGGQD DLMDYCPLVEPVTSCSDIGASKVSVSEYFGPDSACFESNIAGLLIGQKDVDTRCFKYACE DGLLVFYIQDRRYTCSATQEYERKESMPIGFKGYVACPKNGYDILCGQQTAKKVPHTSKG PCLFGVFFCNSATNVFENAFMTSLKVMLAFFGAFMLLLE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0068990.fa Sequence name : NF0068990 Sequence length : 579 VALUES OF COMPUTED PARAMETERS Coef20 : 3.872 CoefTot : 0.000 ChDiff : -1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.953 1.953 0.197 0.675 MesoH : 0.033 0.459 -0.246 0.272 MuHd_075 : 7.941 5.012 2.455 1.466 MuHd_095 : 14.690 7.066 3.909 2.104 MuHd_100 : 15.987 8.714 4.051 2.988 MuHd_105 : 10.949 9.725 3.365 3.399 Hmax_075 : -17.150 -3.500 -6.789 -1.342 Hmax_095 : -10.600 -3.200 -6.185 -0.330 Hmax_100 : -14.100 -3.800 -5.938 -0.890 Hmax_105 : -18.550 -0.583 -7.241 0.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9980 0.0020 DFMC : 0.9921 0.0079
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 579 NF0068990 MEASFLHQEQELKKRKRSISTSQEVWSNLRIVFRLDYLGATDVETRTCIVKDQWYWDGINTPTGQFPGTPACDSNTLTTN 80 CWRKCTDEQVISDALISNIRDVLLPSLKQELSLTVQTRSVRDGDLTSFFSGMSRCGSRGGVPIPSDLKAKGFDGLNADII 160 IFVTTRPTDKGVLGWAVSCASDAITKRPLAGQLNVSPSILSYSLKERMSVLIHESFHALGFSQAAMNTFYNSTLSRTMSF 240 NEVGVAAKKTFVDNYGTTQSVDVNILKTPKVVEVGRSHYNCPTLTGIEMEEGGGQGTAFSHWEKRIMRNEIMVGSLGKEQ 320 LILSPFTLAYFEDSGWYKANFSRATRLLWGRDMGCKMASGRCEQWSQDTPTRTGYYCRDSSVSTCSYDLKSKGGCSITTH 400 TQALGYYEHVAGSPRLGGQDDLMDYCPLVEPVTSCSDIGASKVSVSEYFGPDSACFESNIAGLLIGQKDVDTRCFKYACE 480 DGLLVFYIQDRRYTCSATQEYERKESMPIGFKGYVACPKNGYDILCGQQTAKKVPHTSKGPCLFGVFFCNSATNVFENAF 560 MTSLKVMLAFFGAFMLLLE 640 ................P............................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0068990 13 HQEQELK|KR 0.060 . NF0068990 14 QEQELKK|RK 0.082 . NF0068990 15 EQELKKR|KR 0.187 . NF0068990 16 QELKKRK|RS 0.069 . NF0068990 17 ELKKRKR|SI 0.596 *ProP* NF0068990 30 EVWSNLR|IV 0.078 . NF0068990 34 NLRIVFR|LD 0.092 . NF0068990 46 ATDVETR|TC 0.077 . NF0068990 51 TRTCIVK|DQ 0.068 . NF0068990 83 LTTNCWR|KC 0.084 . NF0068990 84 TTNCWRK|CT 0.133 . NF0068990 100 ALISNIR|DV 0.075 . NF0068990 108 VLLPSLK|QE 0.053 . NF0068990 118 SLTVQTR|SV 0.326 . NF0068990 121 VQTRSVR|DG 0.178 . NF0068990 134 FFSGMSR|CG 0.100 . NF0068990 138 MSRCGSR|GG 0.097 . NF0068990 148 PIPSDLK|AK 0.056 . NF0068990 150 PSDLKAK|GF 0.078 . NF0068990 166 IIFVTTR|PT 0.115 . NF0068990 170 TTRPTDK|GV 0.076 . NF0068990 186 ASDAITK|RP 0.057 . NF0068990 187 SDAITKR|PL 0.263 . NF0068990 205 ILSYSLK|ER 0.079 . NF0068990 207 SYSLKER|MS 0.101 . NF0068990 236 YNSTLSR|TM 0.121 . NF0068990 248 EVGVAAK|KT 0.066 . NF0068990 249 VGVAAKK|TF 0.081 . NF0068990 267 VDVNILK|TP 0.061 . NF0068990 270 NILKTPK|VV 0.081 . NF0068990 276 KVVEVGR|SH 0.109 . NF0068990 304 AFSHWEK|RI 0.080 . NF0068990 305 FSHWEKR|IM 0.235 . NF0068990 308 WEKRIMR|NE 0.195 . NF0068990 318 MVGSLGK|EQ 0.055 . NF0068990 338 EDSGWYK|AN 0.067 . NF0068990 343 YKANFSR|AT 0.091 . NF0068990 346 NFSRATR|LL 0.230 . NF0068990 351 TRLLWGR|DM 0.145 . NF0068990 356 GRDMGCK|MA 0.078 . NF0068990 361 CKMASGR|CE 0.114 . NF0068990 372 SQDTPTR|TG 0.085 . NF0068990 378 RTGYYCR|DS 0.144 . NF0068990 390 TCSYDLK|SK 0.104 . NF0068990 392 SYDLKSK|GG 0.065 . NF0068990 415 HVAGSPR|LG 0.097 . NF0068990 442 SDIGASK|VS 0.058 . NF0068990 468 GLLIGQK|DV 0.072 . NF0068990 473 QKDVDTR|CF 0.084 . NF0068990 476 VDTRCFK|YA 0.133 . NF0068990 491 VFYIQDR|RY 0.079 . NF0068990 492 FYIQDRR|YT 0.112 . NF0068990 503 ATQEYER|KE 0.073 . NF0068990 504 TQEYERK|ES 0.104 . NF0068990 512 SMPIGFK|GY 0.058 . NF0068990 519 GYVACPK|NG 0.071 . NF0068990 532 CGQQTAK|KV 0.072 . NF0068990 533 GQQTAKK|VP 0.087 . NF0068990 539 KVPHTSK|GP 0.062 . NF0068990 565 AFMTSLK|VM 0.061 . ____________________________^_________________

  • Fasta :-

    >NF0068990 ATGGAGGCAAGCTTTCTTCATCAGGAGCAGGAATTAAAGAAGCGAAAGCGGTCCATCTCC ACCTCGCAAGAGGTCTGGTCGAATTTGAGAATTGTATTTCGATTGGACTACTTGGGAGCA ACCGACGTGGAAACCCGAACATGCATTGTGAAGGATCAATGGTACTGGGATGGAATCAAC ACACCCACGGGACAATTTCCTGGAACACCTGCTTGCGATTCGAATACCTTAACAACGAAT TGCTGGAGAAAGTGTACCGATGAGCAAGTCATCTCGGATGCCCTCATTTCGAATATTAGA GATGTGTTGTTGCCATCCCTCAAGCAAGAGCTATCCCTCACGGTACAAACGCGATCCGTA CGAGATGGAGATTTGACTTCGTTTTTCAGTGGCATGTCTCGTTGTGGATCTCGAGGAGGT GTGCCCATTCCTTCCGACTTGAAGGCAAAAGGATTTGATGGACTCAATGCTGACATTATC ATATTCGTCACGACACGACCAACAGACAAGGGAGTGTTAGGTTGGGCTGTCAGTTGTGCC TCCGATGCCATTACGAAACGACCTCTCGCTGGACAATTGAACGTATCGCCATCCATTCTG AGTTATTCACTCAAAGAAAGAATGAGTGTGCTCATTCACGAGTCGTTTCATGCACTGGGA TTTTCTCAGGCAGCAATGAACACGTTTTACAACAGTACATTGTCACGGACCATGTCATTC AACGAAGTTGGAGTAGCTGCAAAGAAAACCTTTGTGGACAATTATGGAACGACACAATCG GTCGATGTGAACATTCTTAAAACACCAAAGGTTGTAGAGGTGGGACGAAGTCATTATAAT TGTCCAACACTAACAGGTATTGAAATGGAGGAAGGTGGTGGCCAAGGAACTGCATTCTCT CATTGGGAAAAGAGAATCATGAGAAACGAAATCATGGTAGGAAGCTTGGGAAAGGAGCAA TTGATTTTGAGCCCTTTCACTCTTGCCTACTTTGAAGATTCTGGTTGGTACAAGGCCAAC TTTTCTCGTGCCACTCGATTATTGTGGGGACGGGATATGGGATGCAAAATGGCTTCAGGA CGATGCGAACAGTGGTCTCAAGACACGCCCACTCGAACAGGCTATTATTGTAGAGATTCA AGTGTCTCTACATGTTCCTACGATTTGAAAAGTAAGGGCGGATGTTCCATCACAACACAC ACGCAAGCTTTGGGATATTATGAACATGTAGCTGGTAGTCCTAGATTGGGAGGTCAGGAC GATTTAATGGACTATTGTCCTTTGGTAGAACCTGTGACTTCATGTTCTGACATTGGCGCC TCCAAGGTGAGTGTGAGCGAATATTTTGGGCCAGATTCTGCTTGCTTTGAGAGCAATATC GCTGGTTTGTTGATAGGCCAAAAAGATGTCGATACTCGATGTTTCAAATATGCATGTGAA GATGGTTTACTCGTGTTCTACATTCAGGATCGTAGATATACGTGTTCAGCCACTCAAGAA TATGAAAGAAAGGAGAGCATGCCCATTGGCTTTAAAGGTTATGTTGCATGCCCAAAGAAT GGTTATGATATTTTGTGTGGTCAACAAACAGCAAAGAAGGTTCCACACACGTCGAAAGGA CCTTGTTTATTTGGTGTCTTTTTTTGCAACTCTGCCACCAATGTTTTTGAAAATGCGTTC ATGACCTCACTGAAAGTGATGTTAGCGTTCTTTGGAGCATTTATGTTGCTTCTGGAATAA
  • Download Fasta

  • Fasta :-

    MEASFLHQEQELKKRKRSISTSQEVWSNLRIVFRLDYLGATDVETRTCIVKDQWYWDGIN TPTGQFPGTPACDSNTLTTNCWRKCTDEQVISDALISNIRDVLLPSLKQELSLTVQTRSV RDGDLTSFFSGMSRCGSRGGVPIPSDLKAKGFDGLNADIIIFVTTRPTDKGVLGWAVSCA SDAITKRPLAGQLNVSPSILSYSLKERMSVLIHESFHALGFSQAAMNTFYNSTLSRTMSF NEVGVAAKKTFVDNYGTTQSVDVNILKTPKVVEVGRSHYNCPTLTGIEMEEGGGQGTAFS HWEKRIMRNEIMVGSLGKEQLILSPFTLAYFEDSGWYKANFSRATRLLWGRDMGCKMASG RCEQWSQDTPTRTGYYCRDSSVSTCSYDLKSKGGCSITTHTQALGYYEHVAGSPRLGGQD DLMDYCPLVEPVTSCSDIGASKVSVSEYFGPDSACFESNIAGLLIGQKDVDTRCFKYACE DGLLVFYIQDRRYTCSATQEYERKESMPIGFKGYVACPKNGYDILCGQQTAKKVPHTSKG PCLFGVFFCNSATNVFENAFMTSLKVMLAFFGAFMLLLE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0068990119 SVQTRSVRDG0.998unspNF0068990119 SVQTRSVRDG0.998unspNF0068990119 SVQTRSVRDG0.998unspNF0068990383 SDSSVSTCSY0.991unspNF0068990444 SASKVSVSEY0.993unspNF006899018 SKRKRSISTS0.99unspNF006899020 SKRSISTSQE0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India