NF0069190 | cathepsin b

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0069190SP0.3880050.6032360.008759CS pos: 26-27. VSC-RV. Pr: 0.5998
No Results

  • Fasta :-

    >NF0069190 MMIVPPTNKTIVSFILLLIILTFVSCRVYSFHSAATNRDTSPTLQEKFNSIQSQQHQLLV NRWHYYFLQLINQVNSYKYNCANIRNDPNDDEKNHSENQSNRESILELKQTWFAAPNELT QFPQHYLKLIQNGLLSSREDLWKRFSSLMTTIKMSKIGEFGREHLRVLNELLKRAEQRDL LRMVKLRNVNNLEELRKRQRAMNIPETFDSRMQWPSCIHPIRDQGNCGSCYAFASTEVMS DRFCIFSNASVNVVLSPQDLISCSWYSFGCDGGIPGLVFDYLHKDGVVSDACLPYLSYNG NTGHKCPSYCFNNASKPLKDDKYFAKSVYHVGSFIENKEDRVIAIQQEILKNGPVNADFM VFQDFVTYKSGVYRHLTGSFAGIHAVKIIGWGVENNIPYWLVANSWGTNWGFDFGHFKIL RGQDECGIEFSVYSGIPNLENVPKTTTPK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0069190.fa Sequence name : NF0069190 Sequence length : 449 VALUES OF COMPUTED PARAMETERS Coef20 : 4.474 CoefTot : 0.205 ChDiff : 4 ZoneTo : 38 KR : 3 DE : 0 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 2.747 0.593 0.849 MesoH : -0.107 0.438 -0.142 0.297 MuHd_075 : 22.713 15.317 7.738 5.615 MuHd_095 : 19.034 19.555 6.476 5.749 MuHd_100 : 18.211 17.838 5.465 4.474 MuHd_105 : 16.122 14.415 4.590 3.997 Hmax_075 : 13.183 14.700 3.366 7.860 Hmax_095 : 19.863 24.588 4.875 7.831 Hmax_100 : 10.900 18.100 4.601 6.120 Hmax_105 : 17.675 21.700 3.547 6.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9122 0.0878 DFMC : 0.9533 0.0467
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 449 NF0069190 MMIVPPTNKTIVSFILLLIILTFVSCRVYSFHSAATNRDTSPTLQEKFNSIQSQQHQLLVNRWHYYFLQLINQVNSYKYN 80 CANIRNDPNDDEKNHSENQSNRESILELKQTWFAAPNELTQFPQHYLKLIQNGLLSSREDLWKRFSSLMTTIKMSKIGEF 160 GREHLRVLNELLKRAEQRDLLRMVKLRNVNNLEELRKRQRAMNIPETFDSRMQWPSCIHPIRDQGNCGSCYAFASTEVMS 240 DRFCIFSNASVNVVLSPQDLISCSWYSFGCDGGIPGLVFDYLHKDGVVSDACLPYLSYNGNTGHKCPSYCFNNASKPLKD 320 DKYFAKSVYHVGSFIENKEDRVIAIQQEILKNGPVNADFMVFQDFVTYKSGVYRHLTGSFAGIHAVKIIGWGVENNIPYW 400 LVANSWGTNWGFDFGHFKILRGQDECGIEFSVYSGIPNLENVPKTTTPK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0069190 9 IVPPTNK|TI 0.053 . NF0069190 27 LTFVSCR|VY 0.080 . NF0069190 38 HSAATNR|DT 0.189 . NF0069190 47 SPTLQEK|FN 0.076 . NF0069190 62 HQLLVNR|WH 0.078 . NF0069190 78 NQVNSYK|YN 0.074 . NF0069190 85 YNCANIR|ND 0.068 . NF0069190 93 DPNDDEK|NH 0.067 . NF0069190 102 SENQSNR|ES 0.116 . NF0069190 109 ESILELK|QT 0.063 . NF0069190 128 FPQHYLK|LI 0.072 . NF0069190 138 NGLLSSR|ED 0.071 . NF0069190 143 SREDLWK|RF 0.073 . NF0069190 144 REDLWKR|FS 0.179 . NF0069190 153 SLMTTIK|MS 0.075 . NF0069190 156 TTIKMSK|IG 0.067 . NF0069190 162 KIGEFGR|EH 0.089 . NF0069190 166 FGREHLR|VL 0.077 . NF0069190 173 VLNELLK|RA 0.062 . NF0069190 174 LNELLKR|AE 0.117 . NF0069190 178 LKRAEQR|DL 0.124 . NF0069190 182 EQRDLLR|MV 0.084 . NF0069190 185 DLLRMVK|LR 0.077 . NF0069190 187 LRMVKLR|NV 0.192 . NF0069190 196 NNLEELR|KR 0.068 . NF0069190 197 NLEELRK|RQ 0.069 . NF0069190 198 LEELRKR|QR 0.140 . NF0069190 200 ELRKRQR|AM 0.087 . NF0069190 211 PETFDSR|MQ 0.075 . NF0069190 222 SCIHPIR|DQ 0.150 . NF0069190 242 TEVMSDR|FC 0.113 . NF0069190 284 VFDYLHK|DG 0.058 . NF0069190 305 NGNTGHK|CP 0.062 . NF0069190 316 CFNNASK|PL 0.062 . NF0069190 319 NASKPLK|DD 0.077 . NF0069190 322 KPLKDDK|YF 0.073 . NF0069190 326 DDKYFAK|SV 0.157 . NF0069190 338 GSFIENK|ED 0.065 . NF0069190 341 IENKEDR|VI 0.121 . NF0069190 351 IQQEILK|NG 0.055 . NF0069190 369 QDFVTYK|SG 0.072 . NF0069190 374 YKSGVYR|HL 0.190 . NF0069190 387 AGIHAVK|II 0.083 . NF0069190 418 FDFGHFK|IL 0.069 . NF0069190 421 GHFKILR|GQ 0.095 . NF0069190 444 NLENVPK|TT 0.077 . NF0069190 449 PKTTTPK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >NF0069190 ATGATGATCGTCCCACCCACCAATAAAACGATCGTCTCCTTCATTCTCTTACTGATCATC TTGACTTTTGTCTCGTGTCGGGTTTACAGCTTTCATTCTGCTGCTACCAATCGGGATACT TCTCCGACCTTACAAGAGAAATTCAACTCAATCCAATCTCAACAACATCAACTACTCGTG AATCGATGGCATTATTATTTCCTTCAACTCATCAATCAAGTCAATTCCTACAAGTATAAT TGTGCTAATATTCGTAATGATCCTAATGATGATGAAAAAAATCATTCCGAAAACCAATCA AATCGAGAATCCATTTTGGAGTTGAAACAAACTTGGTTTGCTGCTCCAAATGAATTGACA CAATTTCCACAACATTATTTGAAATTGATTCAAAATGGATTGTTATCGAGTCGGGAAGAT TTGTGGAAAAGATTTTCTTCTTTGATGACGACTATCAAAATGTCGAAAATTGGAGAATTT GGAAGAGAACATTTGAGAGTATTGAATGAATTGTTGAAAAGAGCGGAACAGCGAGATTTG TTGAGAATGGTCAAGTTGAGAAATGTCAATAATTTGGAGGAATTAAGAAAGAGGCAAAGA GCAATGAATATTCCAGAGACATTTGACAGTCGAATGCAATGGCCTTCTTGTATTCATCCC ATTCGAGATCAAGGCAATTGTGGATCATGTTATGCTTTTGCTTCGACTGAAGTAATGAGT GATCGATTTTGCATCTTTTCAAATGCAAGCGTGAATGTGGTCTTGTCTCCACAAGATTTA ATTTCATGCTCTTGGTATTCATTTGGTTGTGATGGCGGAATTCCTGGTCTTGTCTTTGAT TATCTTCACAAAGATGGAGTCGTGTCAGACGCCTGTCTTCCTTATTTATCCTATAATGGA AATACTGGGCACAAATGTCCTTCCTATTGTTTCAATAATGCAAGCAAGCCATTGAAGGAT GATAAATATTTTGCAAAATCAGTCTATCATGTAGGATCTTTCATTGAAAATAAGGAGGAC CGAGTGATAGCCATTCAGCAAGAGATTTTAAAGAATGGTCCTGTGAATGCAGATTTTATG GTCTTTCAAGATTTTGTGACCTATAAAAGCGGAGTGTATAGACATTTGACAGGAAGTTTT GCTGGAATTCATGCTGTGAAAATTATTGGATGGGGAGTGGAAAACAACATTCCTTATTGG TTAGTGGCAAATAGTTGGGGAACAAATTGGGGTTTTGATTTTGGTCACTTTAAAATATTG AGAGGTCAAGATGAGTGTGGAATTGAATTTTCAGTGTATTCAGGAATTCCAAACCTTGAA AATGTTCCAAAAACAACAACACCTAAATGA
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  • Fasta :-

    MMIVPPTNKTIVSFILLLIILTFVSCRVYSFHSAATNRDTSPTLQEKFNSIQSQQHQLLV NRWHYYFLQLINQVNSYKYNCANIRNDPNDDEKNHSENQSNRESILELKQTWFAAPNELT QFPQHYLKLIQNGLLSSREDLWKRFSSLMTTIKMSKIGEFGREHLRVLNELLKRAEQRDL LRMVKLRNVNNLEELRKRQRAMNIPETFDSRMQWPSCIHPIRDQGNCGSCYAFASTEVMS DRFCIFSNASVNVVLSPQDLISCSWYSFGCDGGIPGLVFDYLHKDGVVSDACLPYLSYNG NTGHKCPSYCFNNASKPLKDDKYFAKSVYHVGSFIENKEDRVIAIQQEILKNGPVNADFM VFQDFVTYKSGVYRHLTGSFAGIHAVKIIGWGVENNIPYWLVANSWGTNWGFDFGHFKIL RGQDECGIEFSVYSGIPNLENVPKTTTPK

  • title: active site
  • coordinates: Q224,C230,H384,N404
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0069190T4460.6060.249NF0069190T4470.6030.160NF0069190T4450.5750.111
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0069190T4460.6060.249NF0069190T4470.6030.160NF0069190T4450.5750.111
IDSitePeptideScoreMethod
NF006919041 SNRDTSPTLQ0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India