NF0075050 | cathepsin b

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0075050OTHER0.9965930.0001220.003285
No Results

  • Fasta :-

    >NF0075050 MSEKEGTLIRRFKVVVNRNILTRTLGLNLQKRIQIAKYPHNTNSQARRTPKAHVAAWQEL SSVQTPATPKQMKTPKTMIPVYHHLWFFLLLLLFTFLVLSTCLVKANHNSLLHRIPVHDN AFIKLINKFTNQRWQAGVNNVFANMTLGQIQQQISRNSISLRERDPFQPNVLPSFHKRCS NLPIEYSLLSDPLYFNCTQLHSIRHDMNCGCWAFAIAEAVGDRFCVTSKTLINHVLSPQW LISCDKNDGGCESGSFDTGLQFVEQVGLVTESCVPFEANDNMACPSYCSNNGQPITRTFK TTHSRLFNVTDMESVQRSILSSGTIIAGMKVYRDFLNYKSGVYHHVAGSWLFNLAVKIVG WGVQQGTGVPYWIAANSWSSEWGMNGYFLIARNQNECELEMNMWETTPVLPSQPYSMLEK KWN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0075050.fa Sequence name : NF0075050 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 4.365 CoefTot : 0.112 ChDiff : 12 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.635 2.794 0.543 0.896 MesoH : 0.077 0.524 -0.283 0.312 MuHd_075 : 20.040 7.378 5.577 2.408 MuHd_095 : 31.238 19.234 6.015 7.779 MuHd_100 : 36.058 21.894 8.097 8.664 MuHd_105 : 32.660 20.287 8.577 8.060 Hmax_075 : -2.100 7.933 -2.861 1.650 Hmax_095 : -1.400 9.800 -2.560 3.200 Hmax_100 : 10.000 17.900 1.157 5.800 Hmax_105 : 8.000 15.200 0.902 4.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8988 0.1012 DFMC : 0.9487 0.0513
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 NF0075050 MSEKEGTLIRRFKVVVNRNILTRTLGLNLQKRIQIAKYPHNTNSQARRTPKAHVAAWQELSSVQTPATPKQMKTPKTMIP 80 VYHHLWFFLLLLLFTFLVLSTCLVKANHNSLLHRIPVHDNAFIKLINKFTNQRWQAGVNNVFANMTLGQIQQQISRNSIS 160 LRERDPFQPNVLPSFHKRCSNLPIEYSLLSDPLYFNCTQLHSIRHDMNCGCWAFAIAEAVGDRFCVTSKTLINHVLSPQW 240 LISCDKNDGGCESGSFDTGLQFVEQVGLVTESCVPFEANDNMACPSYCSNNGQPITRTFKTTHSRLFNVTDMESVQRSIL 320 SSGTIIAGMKVYRDFLNYKSGVYHHVAGSWLFNLAVKIVGWGVQQGTGVPYWIAANSWSSEWGMNGYFLIARNQNECELE 400 MNMWETTPVLPSQPYSMLEKKWN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0075050 4 ---MSEK|EG 0.059 . NF0075050 10 KEGTLIR|RF 0.076 . NF0075050 11 EGTLIRR|FK 0.116 . NF0075050 13 TLIRRFK|VV 0.151 . NF0075050 18 FKVVVNR|NI 0.087 . NF0075050 23 NRNILTR|TL 0.117 . NF0075050 31 LGLNLQK|RI 0.059 . NF0075050 32 GLNLQKR|IQ 0.229 . NF0075050 37 KRIQIAK|YP 0.076 . NF0075050 47 NTNSQAR|RT 0.114 . NF0075050 48 TNSQARR|TP 0.205 . NF0075050 51 QARRTPK|AH 0.156 . NF0075050 70 QTPATPK|QM 0.059 . NF0075050 73 ATPKQMK|TP 0.067 . NF0075050 76 KQMKTPK|TM 0.082 . NF0075050 105 LSTCLVK|AN 0.064 . NF0075050 114 HNSLLHR|IP 0.085 . NF0075050 124 HDNAFIK|LI 0.081 . NF0075050 128 FIKLINK|FT 0.061 . NF0075050 133 NKFTNQR|WQ 0.082 . NF0075050 156 IQQQISR|NS 0.073 . NF0075050 162 RNSISLR|ER 0.145 . NF0075050 164 SISLRER|DP 0.104 . NF0075050 177 VLPSFHK|RC 0.059 . NF0075050 178 LPSFHKR|CS 0.257 . NF0075050 204 TQLHSIR|HD 0.099 . NF0075050 223 AEAVGDR|FC 0.088 . NF0075050 229 RFCVTSK|TL 0.062 . NF0075050 246 WLISCDK|ND 0.070 . NF0075050 297 NGQPITR|TF 0.077 . NF0075050 300 PITRTFK|TT 0.111 . NF0075050 305 FKTTHSR|LF 0.080 . NF0075050 317 DMESVQR|SI 0.120 . NF0075050 330 TIIAGMK|VY 0.064 . NF0075050 333 AGMKVYR|DF 0.112 . NF0075050 339 RDFLNYK|SG 0.066 . NF0075050 357 LFNLAVK|IV 0.106 . NF0075050 392 GYFLIAR|NQ 0.083 . NF0075050 420 PYSMLEK|KW 0.067 . NF0075050 421 YSMLEKK|WN 0.109 . ____________________________^_________________

  • Fasta :-

    >NF0075050 ATGAGTGAGAAGGAAGGAACATTGATAAGAAGATTCAAAGTTGTTGTGAATAGGAATATA CTTACAAGAACATTAGGATTAAATTTGCAAAAAAGAATTCAAATCGCAAAGTACCCTCAC AATACAAATAGCCAAGCCAGACGAACTCCAAAAGCTCATGTTGCTGCTTGGCAGGAGTTG TCTAGTGTTCAAACTCCGGCAACTCCAAAACAAATGAAAACACCAAAAACCATGATACCC GTTTACCACCACTTGTGGTTTTTTCTTCTACTTCTTCTTTTCACTTTCCTTGTTCTCTCC ACTTGCTTAGTGAAGGCTAATCACAACTCACTCCTTCATCGCATTCCCGTTCATGACAAC GCTTTCATTAAATTGATCAATAAATTCACAAACCAACGATGGCAGGCAGGAGTCAACAAT GTCTTTGCAAACATGACACTAGGTCAAATACAACAACAAATTTCAAGAAACAGCATTTCT CTTCGCGAAAGAGATCCCTTTCAACCCAATGTTCTTCCATCTTTTCATAAAAGATGTTCA AATCTTCCGATCGAATACTCTCTTCTTTCCGATCCATTATACTTTAACTGCACTCAACTG CATTCAATTCGCCATGACATGAATTGCGGATGTTGGGCCTTTGCCATTGCTGAAGCAGTG GGTGATCGGTTCTGTGTGACCTCAAAGACTCTCATCAATCATGTCCTCTCGCCTCAATGG TTGATTTCATGTGACAAGAATGATGGAGGTTGTGAGAGTGGTTCATTCGACACTGGTTTG CAATTCGTGGAACAAGTAGGATTAGTGACTGAATCGTGTGTCCCATTTGAAGCGAATGAT AACATGGCTTGTCCTTCGTATTGTTCAAACAATGGACAACCCATCACGCGCACATTTAAA ACCACACATTCACGCCTCTTTAACGTAACTGATATGGAATCAGTTCAAAGAAGCATTCTC TCGAGTGGAACTATTATTGCAGGAATGAAAGTTTATCGAGATTTTCTCAACTATAAAAGT GGAGTCTATCATCATGTCGCAGGATCGTGGTTGTTTAATTTGGCTGTAAAAATTGTTGGA TGGGGAGTTCAGCAAGGTACAGGAGTGCCTTATTGGATTGCAGCAAATTCTTGGAGTTCG GAATGGGGAATGAATGGATATTTTTTGATAGCAAGAAACCAAAACGAGTGTGAACTGGAA ATGAACATGTGGGAGACGACTCCGGTCTTGCCTTCCCAACCCTACAGCATGCTCGAGAAG AAGTGGAATTAA
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  • Fasta :-

    MSEKEGTLIRRFKVVVNRNILTRTLGLNLQKRIQIAKYPHNTNSQARRTPKAHVAAWQEL SSVQTPATPKQMKTPKTMIPVYHHLWFFLLLLLFTFLVLSTCLVKANHNSLLHRIPVHDN AFIKLINKFTNQRWQAGVNNVFANMTLGQIQQQISRNSISLRERDPFQPNVLPSFHKRCS NLPIEYSLLSDPLYFNCTQLHSIRHDMNCGCWAFAIAEAVGDRFCVTSKTLINHVLSPQW LISCDKNDGGCESGSFDTGLQFVEQVGLVTESCVPFEANDNMACPSYCSNNGQPITRTFK TTHSRLFNVTDMESVQRSILSSGTIIAGMKVYRDFLNYKSGVYHHVAGSWLFNLAVKIVG WGVQQGTGVPYWIAANSWSSEWGMNGYFLIARNQNECELEMNMWETTPVLPSQPYSMLEK KWN

  • title: active site
  • coordinates: D206,C211,L354,N376
IDSitePositionGscoreIscore
NF0075050T650.5280.247
IDSitePositionGscoreIscore
NF0075050T650.5280.247
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India