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_ID
Prediction
OTHER
SP
mTP
CS_Position
NF0075900 SP 0.024250 0.974656 0.001094 CS pos: 24-25. LLC-SS. Pr: 0.3626
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >NF0075900 MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGS RIRFSEQNNTWMRKRLEERFLKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGL KNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISGFNVTPCVHRNYKDGENLIVN NLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPG TAYSRMINSMKVAAQFLDRVNEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEE SELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQVLDKYPFMELSIMEVYSALNM KDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0075900.fa Sequence name : NF0075900 Sequence length : 517 VALUES OF COMPUTED PARAMETERS Coef20 : 4.888 CoefTot : 1.299 ChDiff : -15 ZoneTo : 32 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.882 0.460 0.829 MesoH : -0.290 0.353 -0.385 0.282 MuHd_075 : 25.376 19.722 6.861 6.941 MuHd_095 : 16.551 13.753 5.023 4.067 MuHd_100 : 22.780 15.714 6.583 5.399 MuHd_105 : 24.469 17.939 6.718 6.418 Hmax_075 : 21.600 26.800 5.059 7.900 Hmax_095 : 21.262 25.637 5.142 7.385 Hmax_100 : 22.600 26.400 5.384 7.800 Hmax_105 : 20.563 26.400 5.440 7.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8942 0.1058 DFMC : 0.8857 0.1143
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 517 NF0075900 MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGSRIRFSEQNNTWMRKRLEERF 80 LKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGLKNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISG 160 FNVTPCVHRNYKDGENLIVNNLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI 240 QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPGTAYSRMINSMKVAAQFLDRV 320 NEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEESELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQV 400 LDKYPFMELSIMEVYSALNMKDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS 480 QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0075900 4 ---MFSK|VK 0.052 . NF0075900 6 -MFSKVK|VF 0.058 . NF0075900 20 LLMLVMK|AL 0.061 . NF0075900 50 DLNGEMK|EH 0.064 . NF0075900 61 FHQHGSR|IR 0.081 . NF0075900 63 QHGSRIR|FS 0.137 . NF0075900 73 QNNTWMR|KR 0.084 . NF0075900 74 NNTWMRK|RL 0.077 . NF0075900 75 NTWMRKR|LE 0.161 . NF0075900 79 RKRLEER|FL 0.119 . NF0075900 82 LEERFLK|YV 0.152 . NF0075900 102 TVPSTEK|QK 0.053 . NF0075900 104 PSTEKQK|VL 0.062 . NF0075900 115 LLLEELK|TM 0.053 . NF0075900 118 EELKTMK|GL 0.064 . NF0075900 121 KTMKGLK|NV 0.081 . NF0075900 137 VYATLPK|NL 0.063 . NF0075900 141 LPKNLER|DV 0.162 . NF0075900 169 VTPCVHR|NY 0.099 . NF0075900 172 CVHRNYK|DG 0.161 . NF0075900 188 LTIVDYK|ID 0.073 . NF0075900 192 DYKIDGK|EL 0.059 . NF0075900 196 DGKELLK|MI 0.068 . NF0075900 216 LLGADDK|AG 0.070 . NF0075900 252 IDEEIGR|GP 0.074 . NF0075900 261 HYFDIPK|FS 0.069 . NF0075900 275 TVDGGEK|GT 0.070 . NF0075900 305 PGTAYSR|MI 0.081 . NF0075900 311 RMINSMK|VA 0.078 . NF0075900 319 AAQFLDR|VN 0.085 . NF0075900 331 PSPDISK|DR 0.065 . NF0075900 333 PDISKDR|EG 0.091 . NF0075900 348 INGNVEK|TT 0.069 . NF0075900 352 VEKTTIR|CI 0.082 . NF0075900 356 TIRCILR|SF 0.171 . NF0075900 364 FEESELK|QY 0.066 . NF0075900 372 YSQEISK|II 0.070 . NF0075900 378 KIIDQLR|FE 0.093 . NF0075900 395 NVVQQYR|NM 0.097 . NF0075900 398 QQYRNMK|QV 0.228 . NF0075900 403 MKQVLDK|YP 0.081 . NF0075900 421 YSALNMK|DI 0.075 . NF0075900 429 IVSIPIR|GG 0.109 . NF0075900 446 MGLPTGK|FF 0.067 . NF0075900 457 YSNSTTR|NS 0.102 . NF0075900 495 DMADSVK|VI 0.059 . NF0075900 506 LSQTLSK|VP 0.053 . NF0075900 514 PPLPIMK|GH 0.062 . ____________________________^_________________
  • Fasta :-

    >NF0075900 ATGTTCTCAAAAGTCAAGGTGTTTTTCTGCTTGCTGGTATTGTTGATGTTGGTGATGAAG GCTTTGCTATGCAGCTCGTCATCGCCTTCCTCCTCGGAATCAATTTCTCATGATGGCACC ATTCAAGTCGATTTAAATGGTGAGATGAAAGAGCATGATCATTTTCATCAACATGGATCG AGAATCCGTTTTTCCGAACAAAACAATACTTGGATGAGAAAAAGATTAGAAGAACGATTT TTAAAATATGTACAAATTGACACTCAAAGTGATCCACACAGTACCACTGTACCAAGCACA GAAAAACAAAAAGTTTTGGCACATCTATTACTCGAAGAGTTGAAAACTATGAAAGGACTC AAAAATGTAGATATGGATCAGTATGGAAATGTCTATGCCACATTACCAAAGAATTTGGAA AGAGATGTATTGAGTGTTGGATTTTTGGCTCATATGGACACAGCAACTGAAATTAGTGGA TTCAATGTCACACCATGTGTGCACAGAAATTACAAAGATGGTGAAAATCTCATAGTGAAT AATTTGACGATTGTGGATTATAAAATCGATGGAAAGGAACTTTTGAAAATGATTGGTCAC GACATTGTCACAGCAAGCGGTGGTACATTGTTGGGAGCCGATGATAAAGCAGGTATTGCT GAAATTATGACTGCTATTGAATTTTTAATTGAGAATCCTTCCATTGAGCATGGAGATATT CAAATTGGTTTTACGATCGATGAAGAAATTGGAAGGGGACCTCATTACTTTGATATTCCA AAATTTTCAGCTGCAGTTGCTTTCACAGTCGATGGAGGAGAGAAGGGCACATACAATGTG GAATCATTTAGTGCTGACTTGGTCACTGTTGCATTTACAGGATTTAATATTCATCCTGGA ACTGCATATAGCAGAATGATCAACTCAATGAAAGTTGCTGCCCAATTTTTAGACAGAGTC AATGAACAGATGCCCTCTCCTGACATCAGTAAGGACAGAGAAGGATTTGCACATTGTCTA GACATTAATGGAAATGTTGAAAAAACCACCATTAGGTGTATTTTGAGATCCTTTGAAGAA TCTGAATTGAAACAATACTCACAAGAAATTTCCAAAATCATTGACCAACTTAGATTTGAA CATTCTAATGTGACCATTGAAATGAATGTCGTTCAACAATACAGAAACATGAAACAAGTC CTAGACAAGTATCCATTCATGGAATTGAGCATCATGGAAGTTTACTCTGCACTAAACATG AAAGACATTGTTTCAATTCCAATTCGAGGAGGTACCGATGGCTCTCAGTTGAGTTGGATG GGTCTCCCAACAGGTAAGTTCTTTCACCCATATTCCAATTCCACAACAAGAAATTCATTG ATTTTGTTACATCACAATAATACAGCCAACATATTCGCTGGAGGACATAATTTCCATTCA CAAAGCGAATTTGTTTCTCTCCATGACATGGCGGACTCTGTCAAGGTCATTGTGATGCTT TCACAGACCCTTTCCAAAGTTCCACCTCTGCCAATAATGAAAGGTCATCACTAA
  • Download Fasta
  • Fasta :-

    MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGS RIRFSEQNNTWMRKRLEERFLKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGL KNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISGFNVTPCVHRNYKDGENLIVN NLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPG TAYSRMINSMKVAAQFLDRVNEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEE SELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQVLDKYPFMELSIMEVYSALNM KDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH

  • title: metal binding site
  • coordinates: H151,D214,E248,E249,D271,H479
No Results
No Results
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
NF0075900 99 S TTVPSTEKQ 0.992 unsp NF0075900 99 S TTVPSTEKQ 0.992 unsp NF0075900 99 S TTVPSTEKQ 0.992 unsp NF0075900 357 S CILRSFEES 0.994 unsp NF0075900 30 S SSSPSSSES 0.996 unsp NF0075900 31 S SSPSSSESI 0.995 unsp
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India