NF0075900 | peptidase t

_IDPredictionOTHERSPmTPCS_Position
NF0075900SP0.0242500.9746560.001094CS pos: 24-25. LLC-SS. Pr: 0.3626
No Results

  • Fasta :-

    >NF0075900 MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGS RIRFSEQNNTWMRKRLEERFLKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGL KNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISGFNVTPCVHRNYKDGENLIVN NLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPG TAYSRMINSMKVAAQFLDRVNEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEE SELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQVLDKYPFMELSIMEVYSALNM KDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0075900.fa Sequence name : NF0075900 Sequence length : 517 VALUES OF COMPUTED PARAMETERS Coef20 : 4.888 CoefTot : 1.299 ChDiff : -15 ZoneTo : 32 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.882 0.460 0.829 MesoH : -0.290 0.353 -0.385 0.282 MuHd_075 : 25.376 19.722 6.861 6.941 MuHd_095 : 16.551 13.753 5.023 4.067 MuHd_100 : 22.780 15.714 6.583 5.399 MuHd_105 : 24.469 17.939 6.718 6.418 Hmax_075 : 21.600 26.800 5.059 7.900 Hmax_095 : 21.262 25.637 5.142 7.385 Hmax_100 : 22.600 26.400 5.384 7.800 Hmax_105 : 20.563 26.400 5.440 7.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8942 0.1058 DFMC : 0.8857 0.1143
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 517 NF0075900 MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGSRIRFSEQNNTWMRKRLEERF 80 LKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGLKNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISG 160 FNVTPCVHRNYKDGENLIVNNLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI 240 QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPGTAYSRMINSMKVAAQFLDRV 320 NEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEESELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQV 400 LDKYPFMELSIMEVYSALNMKDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS 480 QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0075900 4 ---MFSK|VK 0.052 . NF0075900 6 -MFSKVK|VF 0.058 . NF0075900 20 LLMLVMK|AL 0.061 . NF0075900 50 DLNGEMK|EH 0.064 . NF0075900 61 FHQHGSR|IR 0.081 . NF0075900 63 QHGSRIR|FS 0.137 . NF0075900 73 QNNTWMR|KR 0.084 . NF0075900 74 NNTWMRK|RL 0.077 . NF0075900 75 NTWMRKR|LE 0.161 . NF0075900 79 RKRLEER|FL 0.119 . NF0075900 82 LEERFLK|YV 0.152 . NF0075900 102 TVPSTEK|QK 0.053 . NF0075900 104 PSTEKQK|VL 0.062 . NF0075900 115 LLLEELK|TM 0.053 . NF0075900 118 EELKTMK|GL 0.064 . NF0075900 121 KTMKGLK|NV 0.081 . NF0075900 137 VYATLPK|NL 0.063 . NF0075900 141 LPKNLER|DV 0.162 . NF0075900 169 VTPCVHR|NY 0.099 . NF0075900 172 CVHRNYK|DG 0.161 . NF0075900 188 LTIVDYK|ID 0.073 . NF0075900 192 DYKIDGK|EL 0.059 . NF0075900 196 DGKELLK|MI 0.068 . NF0075900 216 LLGADDK|AG 0.070 . NF0075900 252 IDEEIGR|GP 0.074 . NF0075900 261 HYFDIPK|FS 0.069 . NF0075900 275 TVDGGEK|GT 0.070 . NF0075900 305 PGTAYSR|MI 0.081 . NF0075900 311 RMINSMK|VA 0.078 . NF0075900 319 AAQFLDR|VN 0.085 . NF0075900 331 PSPDISK|DR 0.065 . NF0075900 333 PDISKDR|EG 0.091 . NF0075900 348 INGNVEK|TT 0.069 . NF0075900 352 VEKTTIR|CI 0.082 . NF0075900 356 TIRCILR|SF 0.171 . NF0075900 364 FEESELK|QY 0.066 . NF0075900 372 YSQEISK|II 0.070 . NF0075900 378 KIIDQLR|FE 0.093 . NF0075900 395 NVVQQYR|NM 0.097 . NF0075900 398 QQYRNMK|QV 0.228 . NF0075900 403 MKQVLDK|YP 0.081 . NF0075900 421 YSALNMK|DI 0.075 . NF0075900 429 IVSIPIR|GG 0.109 . NF0075900 446 MGLPTGK|FF 0.067 . NF0075900 457 YSNSTTR|NS 0.102 . NF0075900 495 DMADSVK|VI 0.059 . NF0075900 506 LSQTLSK|VP 0.053 . NF0075900 514 PPLPIMK|GH 0.062 . ____________________________^_________________

  • Fasta :-

    >NF0075900 ATGTTCTCAAAAGTCAAGGTGTTTTTCTGCTTGCTGGTATTGTTGATGTTGGTGATGAAG GCTTTGCTATGCAGCTCGTCATCGCCTTCCTCCTCGGAATCAATTTCTCATGATGGCACC ATTCAAGTCGATTTAAATGGTGAGATGAAAGAGCATGATCATTTTCATCAACATGGATCG AGAATCCGTTTTTCCGAACAAAACAATACTTGGATGAGAAAAAGATTAGAAGAACGATTT TTAAAATATGTACAAATTGACACTCAAAGTGATCCACACAGTACCACTGTACCAAGCACA GAAAAACAAAAAGTTTTGGCACATCTATTACTCGAAGAGTTGAAAACTATGAAAGGACTC AAAAATGTAGATATGGATCAGTATGGAAATGTCTATGCCACATTACCAAAGAATTTGGAA AGAGATGTATTGAGTGTTGGATTTTTGGCTCATATGGACACAGCAACTGAAATTAGTGGA TTCAATGTCACACCATGTGTGCACAGAAATTACAAAGATGGTGAAAATCTCATAGTGAAT AATTTGACGATTGTGGATTATAAAATCGATGGAAAGGAACTTTTGAAAATGATTGGTCAC GACATTGTCACAGCAAGCGGTGGTACATTGTTGGGAGCCGATGATAAAGCAGGTATTGCT GAAATTATGACTGCTATTGAATTTTTAATTGAGAATCCTTCCATTGAGCATGGAGATATT CAAATTGGTTTTACGATCGATGAAGAAATTGGAAGGGGACCTCATTACTTTGATATTCCA AAATTTTCAGCTGCAGTTGCTTTCACAGTCGATGGAGGAGAGAAGGGCACATACAATGTG GAATCATTTAGTGCTGACTTGGTCACTGTTGCATTTACAGGATTTAATATTCATCCTGGA ACTGCATATAGCAGAATGATCAACTCAATGAAAGTTGCTGCCCAATTTTTAGACAGAGTC AATGAACAGATGCCCTCTCCTGACATCAGTAAGGACAGAGAAGGATTTGCACATTGTCTA GACATTAATGGAAATGTTGAAAAAACCACCATTAGGTGTATTTTGAGATCCTTTGAAGAA TCTGAATTGAAACAATACTCACAAGAAATTTCCAAAATCATTGACCAACTTAGATTTGAA CATTCTAATGTGACCATTGAAATGAATGTCGTTCAACAATACAGAAACATGAAACAAGTC CTAGACAAGTATCCATTCATGGAATTGAGCATCATGGAAGTTTACTCTGCACTAAACATG AAAGACATTGTTTCAATTCCAATTCGAGGAGGTACCGATGGCTCTCAGTTGAGTTGGATG GGTCTCCCAACAGGTAAGTTCTTTCACCCATATTCCAATTCCACAACAAGAAATTCATTG ATTTTGTTACATCACAATAATACAGCCAACATATTCGCTGGAGGACATAATTTCCATTCA CAAAGCGAATTTGTTTCTCTCCATGACATGGCGGACTCTGTCAAGGTCATTGTGATGCTT TCACAGACCCTTTCCAAAGTTCCACCTCTGCCAATAATGAAAGGTCATCACTAA
  • Download Fasta

  • Fasta :-

    MFSKVKVFFCLLVLLMLVMKALLCSSSSPSSSESISHDGTIQVDLNGEMKEHDHFHQHGS RIRFSEQNNTWMRKRLEERFLKYVQIDTQSDPHSTTVPSTEKQKVLAHLLLEELKTMKGL KNVDMDQYGNVYATLPKNLERDVLSVGFLAHMDTATEISGFNVTPCVHRNYKDGENLIVN NLTIVDYKIDGKELLKMIGHDIVTASGGTLLGADDKAGIAEIMTAIEFLIENPSIEHGDI QIGFTIDEEIGRGPHYFDIPKFSAAVAFTVDGGEKGTYNVESFSADLVTVAFTGFNIHPG TAYSRMINSMKVAAQFLDRVNEQMPSPDISKDREGFAHCLDINGNVEKTTIRCILRSFEE SELKQYSQEISKIIDQLRFEHSNVTIEMNVVQQYRNMKQVLDKYPFMELSIMEVYSALNM KDIVSIPIRGGTDGSQLSWMGLPTGKFFHPYSNSTTRNSLILLHHNNTANIFAGGHNFHS QSEFVSLHDMADSVKVIVMLSQTLSKVPPLPIMKGHH

  • title: metal binding site
  • coordinates: H151,D214,E248,E249,D271,H479
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF007590099 STTVPSTEKQ0.992unspNF007590099 STTVPSTEKQ0.992unspNF007590099 STTVPSTEKQ0.992unspNF0075900357 SCILRSFEES0.994unspNF007590030 SSSSPSSSES0.996unspNF007590031 SSSPSSSESI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India