NF0076070 | ubiquitin thioesterase otub1-like

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_IDPredictionOTHERSPmTPCS_Position
NF0076070OTHER0.9999420.0000320.000026
No Results

  • Fasta :-

    >NF0076070 MLPQQSSVPSNSDENYTFEQFENQQRSIEQEIKKFPLVDPIASPLTLSTLAYNVGDQVIQ EKIGRSYLLKKYSHIRGIRGDGNCFIRAFVFGLLDFLIRKKDKTLTQQMIDIIDQHYKYL IEVLNYPEHCLEDFYSITKEVFEKVRDGVIHTVEGLLEHYFSDKTTDLMMTSQAIVCFMR FLLSGHIQMNCDDYLPFFLDQYATAKEFCHAEIEIMDRDCDNIHLMAMTSAFKVCIRVEV LDAQSRASDKFDVFGYTIPECSDKEPVVYLLFRPGHYEIIYPRENQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0076070.fa Sequence name : NF0076070 Sequence length : 286 VALUES OF COMPUTED PARAMETERS Coef20 : 3.127 CoefTot : -0.380 ChDiff : -14 ZoneTo : 12 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.635 0.118 0.570 MesoH : -0.706 0.363 -0.392 0.187 MuHd_075 : 18.419 11.602 5.578 3.318 MuHd_095 : 3.114 3.230 1.514 0.986 MuHd_100 : 5.502 4.619 2.499 1.242 MuHd_105 : 8.019 7.820 3.020 2.146 Hmax_075 : 6.900 2.975 0.186 2.170 Hmax_095 : 0.963 -1.400 -1.998 0.954 Hmax_100 : 4.400 2.700 -1.290 2.190 Hmax_105 : 0.300 0.500 -2.644 1.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9950 0.0050 DFMC : 0.9779 0.0221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 286 NF0076070 MLPQQSSVPSNSDENYTFEQFENQQRSIEQEIKKFPLVDPIASPLTLSTLAYNVGDQVIQEKIGRSYLLKKYSHIRGIRG 80 DGNCFIRAFVFGLLDFLIRKKDKTLTQQMIDIIDQHYKYLIEVLNYPEHCLEDFYSITKEVFEKVRDGVIHTVEGLLEHY 160 FSDKTTDLMMTSQAIVCFMRFLLSGHIQMNCDDYLPFFLDQYATAKEFCHAEIEIMDRDCDNIHLMAMTSAFKVCIRVEV 240 LDAQSRASDKFDVFGYTIPECSDKEPVVYLLFRPGHYEIIYPRENQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0076070 26 QFENQQR|SI 0.185 . NF0076070 33 SIEQEIK|KF 0.060 . NF0076070 34 IEQEIKK|FP 0.086 . NF0076070 62 DQVIQEK|IG 0.060 . NF0076070 65 IQEKIGR|SY 0.100 . NF0076070 70 GRSYLLK|KY 0.096 . NF0076070 71 RSYLLKK|YS 0.114 . NF0076070 76 KKYSHIR|GI 0.132 . NF0076070 79 SHIRGIR|GD 0.253 . NF0076070 87 DGNCFIR|AF 0.102 . NF0076070 99 LLDFLIR|KK 0.094 . NF0076070 100 LDFLIRK|KD 0.069 . NF0076070 101 DFLIRKK|DK 0.091 . NF0076070 103 LIRKKDK|TL 0.085 . NF0076070 118 IIDQHYK|YL 0.086 . NF0076070 139 DFYSITK|EV 0.068 . NF0076070 144 TKEVFEK|VR 0.079 . NF0076070 146 EVFEKVR|DG 0.085 . NF0076070 164 EHYFSDK|TT 0.068 . NF0076070 180 AIVCFMR|FL 0.104 . NF0076070 206 DQYATAK|EF 0.072 . NF0076070 218 EIEIMDR|DC 0.110 . NF0076070 233 AMTSAFK|VC 0.056 . NF0076070 237 AFKVCIR|VE 0.062 . NF0076070 246 VLDAQSR|AS 0.080 . NF0076070 250 QSRASDK|FD 0.070 . NF0076070 264 IPECSDK|EP 0.060 . NF0076070 273 VVYLLFR|PG 0.077 . NF0076070 283 YEIIYPR|EN 0.082 . ____________________________^_________________

  • Fasta :-

    >NF0076070 ATGCTTCCACAACAATCTTCAGTCCCATCCAATTCCGATGAAAATTATACTTTTGAACAA TTCGAAAACCAACAAAGATCCATCGAACAAGAAATTAAAAAGTTTCCACTTGTTGATCCA ATTGCTTCTCCTCTCACTCTCTCAACTCTGGCCTATAATGTCGGAGATCAGGTGATTCAG GAAAAGATTGGACGATCATACTTGTTAAAAAAGTATTCTCATATCCGAGGAATCAGAGGT GATGGTAATTGTTTTATCAGAGCTTTTGTTTTCGGATTGTTGGATTTCTTGATTAGGAAA AAGGATAAGACTCTAACTCAACAGATGATTGATATTATTGATCAACATTATAAATACTTG ATTGAAGTATTGAATTATCCGGAACATTGTTTAGAAGACTTTTACAGCATAACAAAGGAG GTTTTTGAAAAAGTGAGAGATGGTGTGATCCATACAGTTGAAGGCTTGTTGGAACATTAC TTTTCCGATAAGACTACTGATCTCATGATGACCTCTCAAGCAATTGTGTGCTTTATGAGG TTCTTGTTGAGTGGTCACATTCAGATGAATTGCGATGATTATTTACCATTTTTTTTGGAT CAATATGCCACAGCAAAAGAGTTCTGTCATGCTGAAATTGAGATTATGGATCGAGATTGT GACAATATTCATCTGATGGCCATGACCAGCGCATTTAAAGTTTGCATTAGAGTTGAAGTT TTGGATGCTCAATCTCGAGCAAGTGACAAATTTGACGTCTTTGGGTATACAATTCCTGAG TGCTCTGACAAGGAGCCAGTTGTGTATTTACTCTTCAGACCTGGACATTACGAAATTATT TATCCAAGGGAAAATCAATAA
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  • Fasta :-

    MLPQQSSVPSNSDENYTFEQFENQQRSIEQEIKKFPLVDPIASPLTLSTLAYNVGDQVIQ EKIGRSYLLKKYSHIRGIRGDGNCFIRAFVFGLLDFLIRKKDKTLTQQMIDIIDQHYKYL IEVLNYPEHCLEDFYSITKEVFEKVRDGVIHTVEGLLEHYFSDKTTDLMMTSQAIVCFMR FLLSGHIQMNCDDYLPFFLDQYATAKEFCHAEIEIMDRDCDNIHLMAMTSAFKVCIRVEV LDAQSRASDKFDVFGYTIPECSDKEPVVYLLFRPGHYEIIYPRENQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0076070248 SQSRASDKFD0.997unspNF0076070262 SIPECSDKEP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India