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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0080940.fa Sequence name : NF0080940 Sequence length : 382 VALUES OF COMPUTED PARAMETERS Coef20 : 3.458 CoefTot : -0.113 ChDiff : -28 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.276 0.283 0.622 MesoH : -0.068 0.330 -0.226 0.330 MuHd_075 : 22.047 10.440 6.174 4.698 MuHd_095 : 15.049 7.650 6.684 2.210 MuHd_100 : 29.012 12.809 9.418 3.718 MuHd_105 : 34.663 14.426 10.222 4.332 Hmax_075 : 5.717 7.467 -0.150 3.360 Hmax_095 : -5.000 2.600 0.037 1.356 Hmax_100 : 4.000 8.000 1.987 1.990 Hmax_105 : 5.700 8.600 1.740 2.301 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9510 0.0490 DFMC : 0.8684 0.1316
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 382 NF0080940 MKEQCMICIDNSEWMRNGDYAPSRLGAQVEAANLICGSKTQSNPETTIGVLTMAEENPSVKVAPTTDLGKLLSSLSSVEI 80 GGKLQFSKALQIAYLVLKNRAPDQGTPNRRLVIFVGSPIEENKDDLVKLGLRMKKNNVACDVINFGEVQENTAKLEAFIN 160 AVNRDDNSRMETVPPGPHILSDMLFSSPIVGMGGAGVGAATGGAGVGTGEAGAGGGEFDFGVDPNLDPELAMAIRLSLEE 240 EKRRQEREKQASASSSATTQPETGTASSSSTTAETSSTAGTSTQAVPTTAPPQEDEDVDMDDDDALEKALLLSKQEAGMV 320 DEDDELQQALKMSIDEAQNKKKDENIEDIVEDQEFMQDLVGGLGKNVNSDEVLKKKKDEEKK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0080940 2 -----MK|EQ 0.061 . NF0080940 16 DNSEWMR|NG 0.093 . NF0080940 24 GDYAPSR|LG 0.105 . NF0080940 39 NLICGSK|TQ 0.062 . NF0080940 61 EENPSVK|VA 0.064 . NF0080940 70 PTTDLGK|LL 0.057 . NF0080940 83 SVEIGGK|LQ 0.057 . NF0080940 88 GKLQFSK|AL 0.070 . NF0080940 98 IAYLVLK|NR 0.061 . NF0080940 100 YLVLKNR|AP 0.116 . NF0080940 109 DQGTPNR|RL 0.081 . NF0080940 110 QGTPNRR|LV 0.160 . NF0080940 123 SPIEENK|DD 0.072 . NF0080940 128 NKDDLVK|LG 0.054 . NF0080940 132 LVKLGLR|MK 0.064 . NF0080940 134 KLGLRMK|KN 0.063 . NF0080940 135 LGLRMKK|NN 0.176 . NF0080940 154 VQENTAK|LE 0.056 . NF0080940 164 FINAVNR|DD 0.112 . NF0080940 169 NRDDNSR|ME 0.076 . NF0080940 235 ELAMAIR|LS 0.080 . NF0080940 242 LSLEEEK|RR 0.058 . NF0080940 243 SLEEEKR|RQ 0.147 . NF0080940 244 LEEEKRR|QE 0.138 . NF0080940 247 EKRRQER|EK 0.329 . NF0080940 249 RRQEREK|QA 0.109 . NF0080940 308 DDDALEK|AL 0.054 . NF0080940 314 KALLLSK|QE 0.054 . NF0080940 331 ELQQALK|MS 0.063 . NF0080940 340 IDEAQNK|KK 0.067 . NF0080940 341 DEAQNKK|KD 0.109 . NF0080940 342 EAQNKKK|DE 0.130 . NF0080940 365 LVGGLGK|NV 0.074 . NF0080940 374 NSDEVLK|KK 0.061 . NF0080940 375 SDEVLKK|KK 0.107 . NF0080940 376 DEVLKKK|KD 0.097 . NF0080940 377 EVLKKKK|DE 0.137 . NF0080940 381 KKKDEEK|K- 0.067 . NF0080940 382 KKDEEKK|-- 0.105 . ____________________________^_________________
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India