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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0081870.fa
Sequence name : NF0081870
Sequence length : 347
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.523
CoefTot : -0.148
ChDiff : 1
ZoneTo : 94
KR : 8
DE : 1
CleavSite : 62
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.353 2.453 0.461 0.875
MesoH : 1.023 1.287 0.086 0.523
MuHd_075 : 27.431 20.162 7.673 6.181
MuHd_095 : 24.363 23.994 7.871 8.226
MuHd_100 : 24.468 22.238 8.134 8.169
MuHd_105 : 19.233 17.485 6.956 5.980
Hmax_075 : -7.233 12.367 -4.251 2.840
Hmax_095 : 19.400 18.900 3.516 7.332
Hmax_100 : 0.200 22.900 2.970 7.830
Hmax_105 : 16.700 18.100 -3.364 7.530
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3230 0.6770
DFMC : 0.1782 0.8218
This protein is probably imported in chloroplast.
f(Ser) = 0.1809 f(Arg) = 0.0319 CMi = 1.57699
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
347 NF0081870
MAFHKKMSSTTTSIVLSLFHSVILSGLYVGSLYMWKGSLAKSRNDPSQIRKRTISALASTVISIVYCWIVYLMSTSINHT 80
ITTTTTISTTQNSNEFIGSESLGFSAMMGIDFYRIFSQLFGVIAALFLNSCLFLGPIAEALNVESVTSVSEIIPFLQKSV 160
QYLKREFIELCHDLFEILKQYPKFLMNEENVIKYERGGFDKSEEAIFSFRSIVIGPITEEVVFRSCLYFILHYFGGFSMM 240
TSFLVSAILFGVAHCHHIIEHVLHGDMELRAAILNVAVQLTYTFVFGLYCGYIYGKTKSIIAAIVLHAYCNLMGLPSFNM 320
SRPVLACAYITGLVLFWVLLFPVLSVF 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
........................... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0081870 5 --MAFHK|KM 0.065 .
NF0081870 6 -MAFHKK|MS 0.151 .
NF0081870 36 GSLYMWK|GS 0.060 .
NF0081870 41 WKGSLAK|SR 0.067 .
NF0081870 43 GSLAKSR|ND 0.092 .
NF0081870 50 NDPSQIR|KR 0.072 .
NF0081870 51 DPSQIRK|RT 0.103 .
NF0081870 52 PSQIRKR|TI 0.283 .
NF0081870 114 MGIDFYR|IF 0.114 .
NF0081870 158 IIPFLQK|SV 0.079 .
NF0081870 164 KSVQYLK|RE 0.058 .
NF0081870 165 SVQYLKR|EF 0.194 .
NF0081870 179 DLFEILK|QY 0.059 .
NF0081870 183 ILKQYPK|FL 0.073 .
NF0081870 193 NEENVIK|YE 0.066 .
NF0081870 196 NVIKYER|GG 0.081 .
NF0081870 201 ERGGFDK|SE 0.106 .
NF0081870 210 EAIFSFR|SI 0.160 .
NF0081870 224 TEEVVFR|SC 0.134 .
NF0081870 270 HGDMELR|AA 0.088 .
NF0081870 296 CGYIYGK|TK 0.063 .
NF0081870 298 YIYGKTK|SI 0.102 .
NF0081870 322 PSFNMSR|PV 0.097 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation