NF0082860 | mitochondrial inner membrane protease atp23 homolog isoform x1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0082860OTHER0.9999890.0000070.000003
No Results

  • Fasta :-

    >NF0082860 MSHHIINKQDDATNKDSECWIESYFRACIENNTEKTTSIQCDEKVKEFYRTLISECGQKI SLQIVECDNNARAYYQRRFNHEKQEEERSIIVCKNHVLEEKDLNEVLRHELVHAIDDSPK CSMLNFNLRNLHDRSCSEIRAAYWAECGSLLRPNTDPSKVHFQCVKHTAMQSVKLDHPFD LVQESVKRMMWKCYNSKVRLNTGD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0082860.fa Sequence name : NF0082860 Sequence length : 204 VALUES OF COMPUTED PARAMETERS Coef20 : 3.153 CoefTot : -0.768 ChDiff : -3 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.424 0.571 -0.145 0.204 MesoH : -1.635 -0.337 -0.674 -0.056 MuHd_075 : 4.855 12.462 4.195 2.712 MuHd_095 : 34.079 19.084 10.747 5.242 MuHd_100 : 31.032 18.856 10.598 4.877 MuHd_105 : 22.437 15.228 8.306 3.762 Hmax_075 : -12.162 -0.000 -4.776 0.303 Hmax_095 : -1.137 1.400 -2.065 1.120 Hmax_100 : -3.400 2.300 -2.110 1.440 Hmax_105 : -3.700 3.500 -2.110 1.738 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9786 0.0214 DFMC : 0.9863 0.0137
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 204 NF0082860 MSHHIINKQDDATNKDSECWIESYFRACIENNTEKTTSIQCDEKVKEFYRTLISECGQKISLQIVECDNNARAYYQRRFN 80 HEKQEEERSIIVCKNHVLEEKDLNEVLRHELVHAIDDSPKCSMLNFNLRNLHDRSCSEIRAAYWAECGSLLRPNTDPSKV 160 HFQCVKHTAMQSVKLDHPFDLVQESVKRMMWKCYNSKVRLNTGD 240 ................................................................................ 80 ................................................................................ 160 ............................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0082860 8 SHHIINK|QD 0.072 . NF0082860 15 QDDATNK|DS 0.074 . NF0082860 26 WIESYFR|AC 0.078 . NF0082860 35 IENNTEK|TT 0.074 . NF0082860 44 SIQCDEK|VK 0.060 . NF0082860 46 QCDEKVK|EF 0.062 . NF0082860 50 KVKEFYR|TL 0.088 . NF0082860 59 ISECGQK|IS 0.059 . NF0082860 72 ECDNNAR|AY 0.089 . NF0082860 77 ARAYYQR|RF 0.099 . NF0082860 78 RAYYQRR|FN 0.234 . NF0082860 83 RRFNHEK|QE 0.069 . NF0082860 88 EKQEEER|SI 0.144 . NF0082860 94 RSIIVCK|NH 0.068 . NF0082860 101 NHVLEEK|DL 0.083 . NF0082860 108 DLNEVLR|HE 0.083 . NF0082860 120 AIDDSPK|CS 0.060 . NF0082860 129 MLNFNLR|NL 0.098 . NF0082860 134 LRNLHDR|SC 0.275 . NF0082860 140 RSCSEIR|AA 0.149 . NF0082860 152 ECGSLLR|PN 0.068 . NF0082860 159 PNTDPSK|VH 0.061 . NF0082860 166 VHFQCVK|HT 0.061 . NF0082860 174 TAMQSVK|LD 0.064 . NF0082860 187 LVQESVK|RM 0.058 . NF0082860 188 VQESVKR|MM 0.163 . NF0082860 192 VKRMMWK|CY 0.074 . NF0082860 197 WKCYNSK|VR 0.056 . NF0082860 199 CYNSKVR|LN 0.092 . ____________________________^_________________

  • Fasta :-

    >NF0082860 ATGTCTCATCATATCATTAACAAACAAGATGATGCCACCAACAAGGACTCCGAATGCTGG ATTGAATCCTATTTCCGAGCTTGCATTGAAAATAATACAGAAAAAACAACTAGCATACAA TGTGATGAAAAAGTAAAAGAGTTCTATAGAACATTAATTTCGGAATGTGGACAAAAGATT TCTCTTCAAATTGTCGAGTGCGATAACAATGCCAGAGCCTACTATCAAAGAAGATTTAAC CACGAAAAACAAGAAGAAGAAAGAAGTATCATCGTTTGTAAAAATCACGTACTGGAAGAA AAGGATTTGAATGAAGTGTTACGGCATGAACTGGTTCATGCGATTGATGATTCTCCAAAA TGTTCAATGCTGAATTTTAATTTAAGAAATTTGCATGACAGAAGTTGTAGTGAGATAAGA GCGGCATATTGGGCGGAATGTGGATCGTTATTGAGACCAAATACTGATCCATCAAAAGTG CATTTTCAATGTGTTAAACATACTGCTATGCAATCTGTAAAGCTCGACCATCCCTTTGAT CTCGTTCAAGAGTCTGTCAAGAGAATGATGTGGAAATGTTACAATAGCAAAGTTCGGCTC AATACTGGAGATTAG
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  • Fasta :-

    MSHHIINKQDDATNKDSECWIESYFRACIENNTEKTTSIQCDEKVKEFYRTLISECGQKI SLQIVECDNNARAYYQRRFNHEKQEEERSIIVCKNHVLEEKDLNEVLRHELVHAIDDSPK CSMLNFNLRNLHDRSCSEIRAAYWAECGSLLRPNTDPSKVHFQCVKHTAMQSVKLDHPFD LVQESVKRMMWKCYNSKVRLNTGD

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India