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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0083810.fa
Sequence name : NF0083810
Sequence length : 541
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.590
CoefTot : -1.108
ChDiff : -9
ZoneTo : 56
KR : 5
DE : 1
CleavSite : 64
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.806 1.965 0.284 0.693
MesoH : -0.129 0.481 -0.207 0.269
MuHd_075 : 29.595 24.750 9.006 7.501
MuHd_095 : 19.802 18.933 6.128 6.382
MuHd_100 : 21.885 19.359 6.707 6.002
MuHd_105 : 27.423 23.759 8.308 6.996
Hmax_075 : 12.200 17.500 1.334 4.970
Hmax_095 : 9.300 12.400 -1.694 3.910
Hmax_100 : -0.000 14.300 1.429 4.370
Hmax_105 : 10.267 14.200 1.463 4.120
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3256 0.6744
DFMC : 0.4361 0.5639
This protein is probably imported in mitochondria.
f(Ser) = 0.1071 f(Arg) = 0.0357 CMi = 0.89286
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
541 NF0083810
MSTATTAITTPFNVLVLGVFGTDGKLSRSAQTVIASKFQSNKFVQGNTWIGQTRSLDVSVFNSVDDVFEQGFALRDSIQR 80
VVFVGLAKKEQKPEENAVAMGVTTQYSAQVVGDAEFVQVGKSVRAEITKIVEALKKEKKEENVVFHFDDFHGHAQAVAEG 160
AALGAWKFDLNYEKFLQPIFGKDGFLLNSIKLVPGLGEQNEKDFKTGIVTGAYQLFSRYLIELPANYLTPIKYCELIKLK 240
VEKYTLFASPEAVSSKFKINVYDEDWAKEKGMGSFLSVTAGTEAPARVLELIYVNDKSKKEDEFEIALLGKGITFDSGGI 320
SLKPGEGMKEMKGDMGGSSCAICSTLAALELDLPLNMITVAMLCENMPSGCATKPGDVVTAMNGKTIEVDNTDAEGRLIL 400
ADGLCYLSEKKPQTLIDMATLTGAVIIALSHVTAAVFSNSSPLVEELEKASFQTSDYLWRLPIFREDYLEQMKSDVSDYN 480
NIGGRPGGSCTAATFLSEFVDFSKVKQWAHLDIAAVTKTKVGYTGRPTRAVVEFLQQRARK 560
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
............................................................. 560
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0083810 25 VFGTDGK|LS 0.059 .
NF0083810 28 TDGKLSR|SA 0.229 .
NF0083810 37 QTVIASK|FQ 0.070 .
NF0083810 42 SKFQSNK|FV 0.095 .
NF0083810 54 TWIGQTR|SL 0.186 .
NF0083810 75 EQGFALR|DS 0.098 .
NF0083810 80 LRDSIQR|VV 0.118 .
NF0083810 88 VFVGLAK|KE 0.058 .
NF0083810 89 FVGLAKK|EQ 0.088 .
NF0083810 92 LAKKEQK|PE 0.073 .
NF0083810 121 EFVQVGK|SV 0.108 .
NF0083810 124 QVGKSVR|AE 0.090 .
NF0083810 129 VRAEITK|IV 0.094 .
NF0083810 135 KIVEALK|KE 0.060 .
NF0083810 136 IVEALKK|EK 0.085 .
NF0083810 138 EALKKEK|KE 0.067 .
NF0083810 139 ALKKEKK|EE 0.093 .
NF0083810 167 AALGAWK|FD 0.064 .
NF0083810 174 FDLNYEK|FL 0.066 .
NF0083810 182 LQPIFGK|DG 0.063 .
NF0083810 191 FLLNSIK|LV 0.068 .
NF0083810 202 LGEQNEK|DF 0.079 .
NF0083810 205 QNEKDFK|TG 0.057 .
NF0083810 218 AYQLFSR|YL 0.092 .
NF0083810 232 NYLTPIK|YC 0.057 .
NF0083810 238 KYCELIK|LK 0.057 .
NF0083810 240 CELIKLK|VE 0.054 .
NF0083810 243 IKLKVEK|YT 0.069 .
NF0083810 256 PEAVSSK|FK 0.076 .
NF0083810 258 AVSSKFK|IN 0.072 .
NF0083810 268 YDEDWAK|EK 0.068 .
NF0083810 270 EDWAKEK|GM 0.075 .
NF0083810 287 GTEAPAR|VL 0.088 .
NF0083810 297 LIYVNDK|SK 0.072 .
NF0083810 299 YVNDKSK|KE 0.066 .
NF0083810 300 VNDKSKK|ED 0.104 .
NF0083810 311 EIALLGK|GI 0.065 .
NF0083810 323 SGGISLK|PG 0.069 .
NF0083810 329 KPGEGMK|EM 0.062 .
NF0083810 332 EGMKEMK|GD 0.072 .
NF0083810 374 PSGCATK|PG 0.067 .
NF0083810 385 VTAMNGK|TI 0.066 .
NF0083810 397 NTDAEGR|LI 0.079 .
NF0083810 410 LCYLSEK|KP 0.062 .
NF0083810 411 CYLSEKK|PQ 0.070 .
NF0083810 449 LVEELEK|AS 0.060 .
NF0083810 460 TSDYLWR|LP 0.080 .
NF0083810 465 WRLPIFR|ED 0.079 .
NF0083810 473 DYLEQMK|SD 0.060 .
NF0083810 485 YNNIGGR|PG 0.096 .
NF0083810 504 EFVDFSK|VK 0.058 .
NF0083810 506 VDFSKVK|QW 0.065 .
NF0083810 518 DIAAVTK|TK 0.061 .
NF0083810 520 AAVTKTK|VG 0.068 .
NF0083810 526 KVGYTGR|PT 0.106 .
NF0083810 529 YTGRPTR|AV 0.405 .
NF0083810 538 VEFLQQR|AR 0.073 .
NF0083810 540 FLQQRAR|K- 0.095 .
NF0083810 541 LQQRARK|-- 0.272 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation