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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0085040.fa
Sequence name : NF0085040
Sequence length : 783
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.366
CoefTot : -3.627
ChDiff : -10
ZoneTo : 99
KR : 10
DE : 3
CleavSite : 89
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.224 1.171 0.084 0.524
MesoH : -0.563 0.279 -0.410 0.224
MuHd_075 : 29.830 21.991 10.293 6.714
MuHd_095 : 27.205 24.780 9.213 6.382
MuHd_100 : 25.890 22.101 7.429 6.260
MuHd_105 : 32.104 17.972 8.389 6.163
Hmax_075 : 19.367 20.650 3.673 4.393
Hmax_095 : 16.200 18.988 2.336 6.055
Hmax_100 : 5.900 22.500 2.789 3.920
Hmax_105 : 11.200 19.367 0.865 2.430
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3803 0.6197
DFMC : 0.2689 0.7311
This protein is probably imported in chloroplast.
f(Ser) = 0.1616 f(Arg) = 0.0303 CMi = 1.43756
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
783 NF0085040
MSLMTRLAETAAFGIQSKKKSFLWPLDSLGIVSSSFLKRKPIGGSDHHHHCYYKKNPSLLFTSNSSSLFHIPYYQQQQRF 80
FSHHSIINMVQLNVQSILQDEKLKHYVCPEKIPVTRLELEEAWNALSDDQKLYAHYFSRAAISGTPIVLHQVSEESPQIY 160
QLLCLLFKGGAEANGLKEKALKAGVSEHDYEAVINYAVSFFGNMGNYLSFGDCKFIPRCEPEEFEKVVKASGNQQAIDLF 240
EKIRNAMYSLESNVLELGFGNSTYYSRDVTEQEAELVKTFMEQQQIHIEHTRXXXXXXXXXXXXXXXXXXXXXXXXTHTF 320
QDLTITITYGDFSKQLANIRDNLGKALPFAANEHQKEMLRKYIQFFDSGNGQDFLDSQISWVKDKGPIIETNIGFIESYR 400
DPLRVRAEFEGFVAVVNKVASQKAQTIVDNAEKFIARLPWNEDTTNGDRKPFEAAKFIKPDFTSLEVITFTSSGLPAGIN 480
IPNSFNIRDQHGFKNVSLGNVLGAPVASGEEITFLSEEDKKLYTEYKGKAFEVQVILHELLGHGSGSLLKESDIANVINP 560
ITKQPVTTFYKPGENFNSVIGEISNAYEECRAECVGIYLCLDREILKICGFEGEEADKIIYVNWLNMVRAGLMGLQFYNP 640
DTGAWLQAHMRARYSILRVLLEAGNGLIEIKQLDNDLQLSLDKTKIETVGKKAIYDYLLKINVYKSIGDKNAAMELFQKY 720
TSVPEEFVKMRKIVLDKKQPRKVFIQPHTTLSEDGKTVQLVNYPISSSSMIDAFVAQSKFVVQ 800
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
............................................................... 800
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0085040 6 -MSLMTR|LA 0.130 .
NF0085040 18 AFGIQSK|KK 0.058 .
NF0085040 19 FGIQSKK|KS 0.080 .
NF0085040 20 GIQSKKK|SF 0.193 .
NF0085040 38 VSSSFLK|RK 0.066 .
NF0085040 39 SSSFLKR|KP 0.275 .
NF0085040 40 SSFLKRK|PI 0.162 .
NF0085040 54 HHHCYYK|KN 0.067 .
NF0085040 55 HHCYYKK|NP 0.100 .
NF0085040 79 YYQQQQR|FF 0.099 .
NF0085040 102 SILQDEK|LK 0.057 .
NF0085040 104 LQDEKLK|HY 0.060 .
NF0085040 111 HYVCPEK|IP 0.057 .
NF0085040 116 EKIPVTR|LE 0.075 .
NF0085040 131 ALSDDQK|LY 0.070 .
NF0085040 139 YAHYFSR|AA 0.151 .
NF0085040 168 LLCLLFK|GG 0.061 .
NF0085040 177 AEANGLK|EK 0.054 .
NF0085040 179 ANGLKEK|AL 0.080 .
NF0085040 182 LKEKALK|AG 0.061 .
NF0085040 214 LSFGDCK|FI 0.079 .
NF0085040 218 DCKFIPR|CE 0.075 .
NF0085040 226 EPEEFEK|VV 0.083 .
NF0085040 229 EFEKVVK|AS 0.071 .
NF0085040 242 AIDLFEK|IR 0.056 .
NF0085040 244 DLFEKIR|NA 0.110 .
NF0085040 267 NSTYYSR|DV 0.195 .
NF0085040 278 QEAELVK|TF 0.062 .
NF0085040 292 IHIEHTR|XX 0.119 .
NF0085040 334 TYGDFSK|QL 0.070 .
NF0085040 340 KQLANIR|DN 0.078 .
NF0085040 345 IRDNLGK|AL 0.071 .
NF0085040 356 AANEHQK|EM 0.069 .
NF0085040 360 HQKEMLR|KY 0.085 .
NF0085040 361 QKEMLRK|YI 0.099 .
NF0085040 383 SQISWVK|DK 0.089 .
NF0085040 385 ISWVKDK|GP 0.075 .
NF0085040 400 GFIESYR|DP 0.096 .
NF0085040 404 SYRDPLR|VR 0.076 .
NF0085040 406 RDPLRVR|AE 0.092 .
NF0085040 418 FVAVVNK|VA 0.093 .
NF0085040 423 NKVASQK|AQ 0.072 .
NF0085040 433 IVDNAEK|FI 0.063 .
NF0085040 437 AEKFIAR|LP 0.084 .
NF0085040 449 DTTNGDR|KP 0.064 .
NF0085040 450 TTNGDRK|PF 0.118 .
NF0085040 456 KPFEAAK|FI 0.082 .
NF0085040 459 EAAKFIK|PD 0.083 .
NF0085040 488 PNSFNIR|DQ 0.120 .
NF0085040 494 RDQHGFK|NV 0.082 .
NF0085040 520 FLSEEDK|KL 0.079 .
NF0085040 521 LSEEDKK|LY 0.081 .
NF0085040 527 KLYTEYK|GK 0.067 .
NF0085040 529 YTEYKGK|AF 0.072 .
NF0085040 550 GSGSLLK|ES 0.062 .
NF0085040 563 VINPITK|QP 0.059 .
NF0085040 571 PVTTFYK|PG 0.058 .
NF0085040 591 NAYEECR|AE 0.091 .
NF0085040 603 IYLCLDR|EI 0.077 .
NF0085040 607 LDREILK|IC 0.065 .
NF0085040 618 EGEEADK|II 0.060 .
NF0085040 629 NWLNMVR|AG 0.070 .
NF0085040 651 WLQAHMR|AR 0.105 .
NF0085040 653 QAHMRAR|YS 0.103 .
NF0085040 658 ARYSILR|VL 0.089 .
NF0085040 671 NGLIEIK|QL 0.064 .
NF0085040 683 LQLSLDK|TK 0.053 .
NF0085040 685 LSLDKTK|IE 0.065 .
NF0085040 691 KIETVGK|KA 0.061 .
NF0085040 692 IETVGKK|AI 0.112 .
NF0085040 700 IYDYLLK|IN 0.050 .
NF0085040 705 LKINVYK|SI 0.142 .
NF0085040 710 YKSIGDK|NA 0.075 .
NF0085040 719 AMELFQK|YT 0.071 .
NF0085040 729 VPEEFVK|MR 0.066 .
NF0085040 731 EEFVKMR|KI 0.089 .
NF0085040 732 EFVKMRK|IV 0.085 .
NF0085040 737 RKIVLDK|KQ 0.060 .
NF0085040 738 KIVLDKK|QP 0.091 .
NF0085040 741 LDKKQPR|KV 0.209 .
NF0085040 742 DKKQPRK|VF 0.081 .
NF0085040 756 TLSEDGK|TV 0.084 .
NF0085040 779 AFVAQSK|FV 0.089 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation