NF0087110 | mitochondrial inner membrane protease atp23 homolog

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0087110OTHER0.9973220.0024270.000252
No Results

  • Fasta :-

    >NF0087110 MSYYLDMLSILTGKRVNKLLQHIKEQNKNGCKMVTRGLDLRVCDSVEDAGMMGYYSASAN QVVVCCNRHREPEELENTVVHELIHAYDFCRFRQLFYCKVRACSEVRAYSLSGSCSSPDE LSGFTSKEQCLKARAIASTIMACKKSAVSMFMTFSIRVSMMSILSRVRLIIMC
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0087110.fa Sequence name : NF0087110 Sequence length : 173 VALUES OF COMPUTED PARAMETERS Coef20 : 4.181 CoefTot : -1.825 ChDiff : 7 ZoneTo : 38 KR : 7 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.559 1.529 0.123 0.458 MesoH : -0.372 0.477 -0.221 0.103 MuHd_075 : 18.733 16.559 6.998 5.564 MuHd_095 : 47.445 29.211 14.121 10.410 MuHd_100 : 46.106 30.763 15.160 10.232 MuHd_105 : 48.609 28.863 14.767 10.757 Hmax_075 : -8.000 -0.175 -4.061 0.621 Hmax_095 : 7.900 9.100 2.916 3.540 Hmax_100 : 9.500 14.900 2.916 4.690 Hmax_105 : 9.200 11.700 1.444 4.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8496 0.1504 DFMC : 0.8382 0.1618
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 173 NF0087110 MSYYLDMLSILTGKRVNKLLQHIKEQNKNGCKMVTRGLDLRVCDSVEDAGMMGYYSASANQVVVCCNRHREPEELENTVV 80 HELIHAYDFCRFRQLFYCKVRACSEVRAYSLSGSCSSPDELSGFTSKEQCLKARAIASTIMACKKSAVSMFMTFSIRVSM 160 MSILSRVRLIIMC 240 ................................................................................ 80 ................................................................................ 160 ............. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0087110 14 LSILTGK|RV 0.076 . NF0087110 15 SILTGKR|VN 0.102 . NF0087110 18 TGKRVNK|LL 0.146 . NF0087110 24 KLLQHIK|EQ 0.064 . NF0087110 28 HIKEQNK|NG 0.060 . NF0087110 32 QNKNGCK|MV 0.082 . NF0087110 36 GCKMVTR|GL 0.101 . NF0087110 41 TRGLDLR|VC 0.111 . NF0087110 68 VVVCCNR|HR 0.086 . NF0087110 70 VCCNRHR|EP 0.103 . NF0087110 91 HAYDFCR|FR 0.076 . NF0087110 93 YDFCRFR|QL 0.084 . NF0087110 99 RQLFYCK|VR 0.057 . NF0087110 101 LFYCKVR|AC 0.120 . NF0087110 107 RACSEVR|AY 0.097 . NF0087110 127 LSGFTSK|EQ 0.061 . NF0087110 132 SKEQCLK|AR 0.061 . NF0087110 134 EQCLKAR|AI 0.117 . NF0087110 144 STIMACK|KS 0.065 . NF0087110 145 TIMACKK|SA 0.222 . NF0087110 157 FMTFSIR|VS 0.075 . NF0087110 166 MMSILSR|VR 0.087 . NF0087110 168 SILSRVR|LI 0.074 . ____________________________^_________________

  • Fasta :-

    >NF0087110 ATGTCATATTATTTAGACATGTTATCGATATTGACTGGCAAGCGTGTGAATAAATTATTA CAACATATTAAAGAACAAAATAAGAATGGATGTAAAATGGTAACAAGAGGATTGGATCTA CGTGTTTGTGATTCTGTAGAAGATGCTGGCATGATGGGATATTATTCTGCATCGGCCAAT CAAGTAGTAGTGTGTTGCAATCGACATAGAGAGCCTGAAGAACTTGAAAATACAGTTGTT CATGAATTAATCCATGCCTATGATTTTTGTAGATTTCGTCAATTATTTTATTGTAAAGTA AGAGCTTGTTCAGAGGTGAGAGCTTATTCACTAAGTGGTTCATGTTCCAGTCCAGATGAA TTATCAGGGTTTACAAGTAAGGAACAATGTTTAAAGGCAAGAGCTATTGCAAGTACGATC ATGGCTTGCAAGAAATCAGCTGTTTCTATGTTCATGACATTTTCAATACGTGTATCAATG ATGAGCATCCTTTCAAGAGTTCGCCTGATCATCATGTGTTAAAACCTCATGAGCTCCCAG AAGCAGATAAAGTAGTCACCAATTAA
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  • Fasta :-

    MSYYLDMLSILTGKRVNKLLQHIKEQNKNGCKMVTRGLDLRVCDSVEDAGMMGYYSASAN QVVVCCNRHREPEELENTVVHELIHAYDFCRFRQLFYCKVRACSEVRAYSLSGSCSSPDE LSGFTSKEQCLKARAIASTIMACKKSAVSMFMTFSIRVSMMSILSRVRLIIMC

    No Results
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IDSitePeptideScoreMethod
NF008711045 SRVCDSVEDA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India