Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0089010.fa
Sequence name : NF0089010
Sequence length : 356
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.465
CoefTot : 0.295
ChDiff : -4
ZoneTo : 14
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.494 1.359 -0.055 0.458
MesoH : -0.779 0.419 -0.457 0.235
MuHd_075 : 5.290 2.380 2.046 1.354
MuHd_095 : 19.997 10.858 4.761 4.527
MuHd_100 : 17.852 11.822 4.607 4.885
MuHd_105 : 11.446 9.122 3.437 4.030
Hmax_075 : -6.200 -4.500 -4.608 -0.640
Hmax_095 : -1.050 0.525 -2.704 1.374
Hmax_100 : 3.600 4.100 -1.102 2.350
Hmax_105 : -3.300 -1.167 -3.539 0.400
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9561 0.0439
DFMC : 0.9234 0.0766
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
356 NF0089010
MLSSTKQQGSASLREENNEDEHLKVYLNVYDLQKSTNVIQHSLGLGSYHSGVQIRNTEYTFSADSGVFSHKPRDIPATFL 80
ESIYMGKTDVESLTELNEIINELKKEFKPSEYHPLRKNCNHFSNALCQRLLDGKTIPGWVNRSAGIGSFFSRFLPKSTEK 160
NLIESTEAKQIMDSVKMEKYENENIYTSLNNVVNMSAIECLNQKKPNIVQNIFDPNDKKYLESDTDEQLIIRIPFKTPVN 240
ITAIILKADNKLKCPREILLFSKTGLIVDFDNAESVDPTQIIEIDPDAALKGVAIPLKIVKFKNVNMLQLFVSNNYGDTS 320
TIINHLNIIGKPVATVDLNKLQQNTPGTTDCSSRSS 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
.................................... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0089010 6 -MLSSTK|QQ 0.060 .
NF0089010 14 QGSASLR|EE 0.092 .
NF0089010 24 NEDEHLK|VY 0.060 .
NF0089010 34 NVYDLQK|ST 0.091 .
NF0089010 55 HSGVQIR|NT 0.138 .
NF0089010 71 SGVFSHK|PR 0.063 .
NF0089010 73 VFSHKPR|DI 0.187 .
NF0089010 87 ESIYMGK|TD 0.061 .
NF0089010 104 EIINELK|KE 0.054 .
NF0089010 105 IINELKK|EF 0.113 .
NF0089010 108 ELKKEFK|PS 0.065 .
NF0089010 116 SEYHPLR|KN 0.093 .
NF0089010 117 EYHPLRK|NC 0.075 .
NF0089010 129 SNALCQR|LL 0.101 .
NF0089010 134 QRLLDGK|TI 0.061 .
NF0089010 142 IPGWVNR|SA 0.377 .
NF0089010 152 IGSFFSR|FL 0.138 .
NF0089010 156 FSRFLPK|ST 0.128 .
NF0089010 160 LPKSTEK|NL 0.066 .
NF0089010 169 IESTEAK|QI 0.108 .
NF0089010 176 QIMDSVK|ME 0.065 .
NF0089010 179 DSVKMEK|YE 0.065 .
NF0089010 204 IECLNQK|KP 0.061 .
NF0089010 205 ECLNQKK|PN 0.085 .
NF0089010 218 IFDPNDK|KY 0.055 .
NF0089010 219 FDPNDKK|YL 0.097 .
NF0089010 232 DEQLIIR|IP 0.073 .
NF0089010 236 IIRIPFK|TP 0.061 .
NF0089010 247 ITAIILK|AD 0.059 .
NF0089010 251 ILKADNK|LK 0.060 .
NF0089010 253 KADNKLK|CP 0.066 .
NF0089010 256 NKLKCPR|EI 0.078 .
NF0089010 263 EILLFSK|TG 0.055 .
NF0089010 291 DPDAALK|GV 0.072 .
NF0089010 298 GVAIPLK|IV 0.073 .
NF0089010 301 IPLKIVK|FK 0.068 .
NF0089010 303 LKIVKFK|NV 0.095 .
NF0089010 331 HLNIIGK|PV 0.087 .
NF0089010 340 ATVDLNK|LQ 0.057 .
NF0089010 354 TTDCSSR|SS 0.148 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation