NF0089160 | otu domain-containing protein 6b-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0089160OTHER0.9999950.0000010.000004
No Results

  • Fasta :-

    >NF0089160 MSSLQELEARHQQEIKQLEEEREVELQKLSGAAAKKKYENKWKERMQQLKQTHETELWEA KMSSTVGDDDEDEEEKHDEKTNGGASSKQSAQAKKEEEEKKKAEQRKQKNAKKKQKKVQK QQEQRLQAQQEFLSDGGVSQRDIEIQRIQQYFENNWCIHEIDSDGHCLYRSLADQLNINL KDTTNPYTKDLLIRANNELSEKNKRELKNLSSSTGFTYLHLRSLIANQLRRKADDYFPFV MDVCETMDQYADTVEHSSEWGGQVEIQAFLDLCQEQYVLKIVQDNGIVTMGSNSKSQTPE QSNLIVTYHKKYYALGEHYNSIRIAPLVPAE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0089160.fa Sequence name : NF0089160 Sequence length : 331 VALUES OF COMPUTED PARAMETERS Coef20 : 3.206 CoefTot : 0.191 ChDiff : -9 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 0.776 -0.097 0.293 MesoH : -1.132 -0.176 -0.574 0.093 MuHd_075 : 10.079 8.977 4.227 2.551 MuHd_095 : 20.448 17.969 6.140 5.722 MuHd_100 : 24.481 20.731 6.355 6.984 MuHd_105 : 22.576 17.435 4.908 6.533 Hmax_075 : -8.600 -1.283 -4.676 0.572 Hmax_095 : 0.900 8.400 -1.910 3.380 Hmax_100 : 3.700 11.100 -1.655 4.200 Hmax_105 : -3.500 6.650 -3.585 3.028 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9760 0.0240 DFMC : 0.9686 0.0314
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 331 NF0089160 MSSLQELEARHQQEIKQLEEEREVELQKLSGAAAKKKYENKWKERMQQLKQTHETELWEAKMSSTVGDDDEDEEEKHDEK 80 TNGGASSKQSAQAKKEEEEKKKAEQRKQKNAKKKQKKVQKQQEQRLQAQQEFLSDGGVSQRDIEIQRIQQYFENNWCIHE 160 IDSDGHCLYRSLADQLNINLKDTTNPYTKDLLIRANNELSEKNKRELKNLSSSTGFTYLHLRSLIANQLRRKADDYFPFV 240 MDVCETMDQYADTVEHSSEWGGQVEIQAFLDLCQEQYVLKIVQDNGIVTMGSNSKSQTPEQSNLIVTYHKKYYALGEHYN 320 SIRIAPLVPAE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0089160 10 LQELEAR|HQ 0.090 . NF0089160 16 RHQQEIK|QL 0.080 . NF0089160 22 KQLEEER|EV 0.107 . NF0089160 28 REVELQK|LS 0.074 . NF0089160 35 LSGAAAK|KK 0.066 . NF0089160 36 SGAAAKK|KY 0.107 . NF0089160 37 GAAAKKK|YE 0.129 . NF0089160 41 KKKYENK|WK 0.075 . NF0089160 43 KYENKWK|ER 0.080 . NF0089160 45 ENKWKER|MQ 0.101 . NF0089160 50 ERMQQLK|QT 0.090 . NF0089160 61 TELWEAK|MS 0.086 . NF0089160 76 DEDEEEK|HD 0.060 . NF0089160 80 EEKHDEK|TN 0.062 . NF0089160 88 NGGASSK|QS 0.069 . NF0089160 94 KQSAQAK|KE 0.081 . NF0089160 95 QSAQAKK|EE 0.121 . NF0089160 100 KKEEEEK|KK 0.064 . NF0089160 101 KEEEEKK|KA 0.118 . NF0089160 102 EEEEKKK|AE 0.104 . NF0089160 106 KKKAEQR|KQ 0.086 . NF0089160 107 KKAEQRK|QK 0.136 . NF0089160 109 AEQRKQK|NA 0.244 . NF0089160 112 RKQKNAK|KK 0.081 . NF0089160 113 KQKNAKK|KQ 0.121 . NF0089160 114 QKNAKKK|QK 0.193 . NF0089160 116 NAKKKQK|KV 0.128 . NF0089160 117 AKKKQKK|VQ 0.145 . NF0089160 120 KQKKVQK|QQ 0.085 . NF0089160 125 QKQQEQR|LQ 0.103 . NF0089160 141 DGGVSQR|DI 0.195 . NF0089160 147 RDIEIQR|IQ 0.078 . NF0089160 170 DGHCLYR|SL 0.167 . NF0089160 181 QLNINLK|DT 0.067 . NF0089160 189 TTNPYTK|DL 0.070 . NF0089160 194 TKDLLIR|AN 0.082 . NF0089160 202 NNELSEK|NK 0.056 . NF0089160 204 ELSEKNK|RE 0.069 . NF0089160 205 LSEKNKR|EL 0.137 . NF0089160 208 KNKRELK|NL 0.133 . NF0089160 222 FTYLHLR|SL 0.116 . NF0089160 230 LIANQLR|RK 0.078 . NF0089160 231 IANQLRR|KA 0.257 . NF0089160 232 ANQLRRK|AD 0.082 . NF0089160 280 QEQYVLK|IV 0.080 . NF0089160 295 TMGSNSK|SQ 0.083 . NF0089160 310 LIVTYHK|KY 0.064 . NF0089160 311 IVTYHKK|YY 0.119 . NF0089160 323 EHYNSIR|IA 0.090 . ____________________________^_________________

  • Fasta :-

    >NF0089160 ATGTCTTCACTTCAAGAATTGGAAGCTCGTCATCAACAAGAAATTAAACAACTCGAAGAG GAGAGAGAAGTGGAATTACAAAAGCTCTCCGGAGCAGCTGCAAAGAAAAAGTACGAAAAC AAATGGAAGGAACGTATGCAGCAATTAAAACAAACTCATGAAACTGAGTTGTGGGAGGCT AAAATGTCCAGTACTGTTGGTGATGATGATGAGGATGAAGAGGAGAAACATGATGAAAAG ACGAATGGTGGAGCTTCCAGTAAACAATCGGCTCAAGCAAAAAAAGAAGAGGAAGAGAAA AAGAAAGCCGAACAACGAAAACAGAAAAACGCCAAGAAAAAACAAAAGAAAGTTCAAAAG CAACAAGAACAACGATTACAGGCTCAACAAGAGTTTTTGAGTGATGGCGGAGTTTCTCAG AGGGATATTGAAATTCAAAGGATTCAACAATATTTTGAAAATAATTGGTGCATTCATGAG ATTGATTCCGATGGTCATTGTTTGTATCGATCTCTTGCAGATCAATTGAACATTAATTTA AAAGATACCACAAATCCATATACAAAGGATTTATTAATACGAGCAAATAACGAGCTCTCA GAGAAGAATAAGAGAGAATTGAAAAATTTATCATCAAGCACAGGTTTTACGTATCTGCAT TTGAGAAGTTTAATTGCAAATCAATTGAGAAGAAAGGCAGATGATTATTTTCCATTTGTT ATGGACGTTTGTGAAACCATGGATCAATATGCGGACACAGTAGAGCATAGTAGTGAGTGG GGAGGTCAAGTAGAAATTCAAGCCTTCCTTGATTTATGTCAGGAACAGTATGTCCTGAAA ATTGTTCAAGACAATGGTATTGTGACAATGGGAAGCAATTCGAAATCACAAACACCAGAA CAATCCAATCTGATCGTGACCTATCACAAGAAGTATTATGCTCTCGGTGAGCACTACAAT AGCATTCGGATTGCTCCTCTTGTCCCTGCAGAATAA
  • Download Fasta

  • Fasta :-

    MSSLQELEARHQQEIKQLEEEREVELQKLSGAAAKKKYENKWKERMQQLKQTHETELWEA KMSSTVGDDDEDEEEKHDEKTNGGASSKQSAQAKKEEEEKKKAEQRKQKNAKKKQKKVQK QQEQRLQAQQEFLSDGGVSQRDIEIQRIQQYFENNWCIHEIDSDGHCLYRSLADQLNINL KDTTNPYTKDLLIRANNELSEKNKRELKNLSSSTGFTYLHLRSLIANQLRRKADDYFPFV MDVCETMDQYADTVEHSSEWGGQVEIQAFLDLCQEQYVLKIVQDNGIVTMGSNSKSQTPE QSNLIVTYHKKYYALGEHYNSIRIAPLVPAE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0089160257 STVEHSSEWG0.99unspNF0089160257 STVEHSSEWG0.99unspNF0089160257 STVEHSSEWG0.99unspNF008916086 SNGGASSKQS0.994unspNF0089160139 SDGGVSQRDI0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India