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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0089880.fa
Sequence name : NF0089880
Sequence length : 185
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.492
CoefTot : -0.469
ChDiff : 5
ZoneTo : 43
KR : 7
DE : 1
CleavSite : 47
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.882 1.388 0.055 0.528
MesoH : -0.911 0.174 -0.455 0.141
MuHd_075 : 32.161 23.097 10.113 7.577
MuHd_095 : 38.938 23.722 9.389 9.432
MuHd_100 : 45.050 25.948 10.026 10.642
MuHd_105 : 45.810 27.070 10.334 10.840
Hmax_075 : 22.100 24.700 7.476 7.157
Hmax_095 : 14.175 9.713 2.099 4.524
Hmax_100 : 15.600 11.900 2.841 5.650
Hmax_105 : 15.300 19.900 3.151 4.524
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0732 0.9268
DFMC : 0.1070 0.8930
This protein is probably imported in mitochondria.
f(Ser) = 0.0930 f(Arg) = 0.0930 CMi = 0.46458
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
185 NF0089880
MFCRNCFISKKFCTVDIFLPLLPIMQRGKRPLYYWSRSLSFLCDNNRDMVLILDVARFKYPPHWISLEKMWEALYPIDSA 80
TGLSRGFIIIKRDNVQKEDQTICYRVVLREKWSETLSKLLTFTRAITEAYKKKVQSESLLDTTPIDISQFCHSIVQILSG 160
SIYEVLEPLLTLDNNISDELKKLFK 240
................................................................................ 80
................................................................................ 160
......................... 240
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0089880 4 ---MFCR|NC 0.091 .
NF0089880 10 RNCFISK|KF 0.066 .
NF0089880 11 NCFISKK|FC 0.095 .
NF0089880 27 LLPIMQR|GK 0.081 .
NF0089880 29 PIMQRGK|RP 0.052 .
NF0089880 30 IMQRGKR|PL 0.422 .
NF0089880 37 PLYYWSR|SL 0.113 .
NF0089880 47 FLCDNNR|DM 0.084 .
NF0089880 57 LILDVAR|FK 0.085 .
NF0089880 59 LDVARFK|YP 0.061 .
NF0089880 69 HWISLEK|MW 0.071 .
NF0089880 85 SATGLSR|GF 0.092 .
NF0089880 91 RGFIIIK|RD 0.061 .
NF0089880 92 GFIIIKR|DN 0.277 .
NF0089880 97 KRDNVQK|ED 0.066 .
NF0089880 105 DQTICYR|VV 0.080 .
NF0089880 109 CYRVVLR|EK 0.085 .
NF0089880 111 RVVLREK|WS 0.059 .
NF0089880 118 WSETLSK|LL 0.062 .
NF0089880 124 KLLTFTR|AI 0.091 .
NF0089880 131 AITEAYK|KK 0.059 .
NF0089880 132 ITEAYKK|KV 0.086 .
NF0089880 133 TEAYKKK|VQ 0.145 .
NF0089880 181 NISDELK|KL 0.071 .
NF0089880 182 ISDELKK|LF 0.087 .
NF0089880 185 ELKKLFK|-- 0.065 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation