NF0090460 | unspecified product

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0090460SP0.3174560.6556930.026851CS pos: 29-30. SLS-AT. Pr: 0.6184
No Results

  • Fasta :-

    >NF0090460 MATSAIIRKSALHLFLLACIVALCYLSLSATTIYGRTQKNGKSASKKTKPSHNHGGQHHN NSTRPVKPHKPEVVNGTTPANDDDLIERINTNHTIGWKATKYARFENMTIGHLRNSLFGL SLLPNDPDTPRIEGEVRVQLPASFDARTAWPRCVLPIRDQQSCGACWAFSSAYVLAQRYC VATGANSYTVLSPEYQVDCDSLERGCQGGYLSSTWRFLTNTGTVPDTCIPYVSGRTTSAG SAQSCQSQCKDGSALRFYKAKSASIIRGVDQIKIAIMTYGSVQAGFTVYRDFLNYKSGVY KHVSTTALGGHAVALIGWGSENGTPYWIAVNSWSTNWGERGYFRIALGSNESGIESQVYA GLANV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0090460.fa Sequence name : NF0090460 Sequence length : 365 VALUES OF COMPUTED PARAMETERS Coef20 : 4.991 CoefTot : -2.368 ChDiff : 12 ZoneTo : 71 KR : 11 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 2.459 0.567 0.759 MesoH : -0.113 0.237 -0.211 0.256 MuHd_075 : 30.742 25.493 9.192 8.607 MuHd_095 : 34.874 17.114 10.737 6.622 MuHd_100 : 35.790 16.781 10.331 7.059 MuHd_105 : 43.611 17.519 12.729 7.649 Hmax_075 : 20.000 27.100 5.147 8.220 Hmax_095 : 0.400 -4.500 -1.644 1.030 Hmax_100 : 3.200 4.900 -1.923 3.150 Hmax_105 : 2.100 -5.017 -1.791 -0.035 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0880 0.9120 DFMC : 0.0524 0.9476 This protein is probably imported in mitochondria. f(Ser) = 0.1127 f(Arg) = 0.0423 CMi = 0.87241 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 365 NF0090460 MATSAIIRKSALHLFLLACIVALCYLSLSATTIYGRTQKNGKSASKKTKPSHNHGGQHHNNSTRPVKPHKPEVVNGTTPA 80 NDDDLIERINTNHTIGWKATKYARFENMTIGHLRNSLFGLSLLPNDPDTPRIEGEVRVQLPASFDARTAWPRCVLPIRDQ 160 QSCGACWAFSSAYVLAQRYCVATGANSYTVLSPEYQVDCDSLERGCQGGYLSSTWRFLTNTGTVPDTCIPYVSGRTTSAG 240 SAQSCQSQCKDGSALRFYKAKSASIIRGVDQIKIAIMTYGSVQAGFTVYRDFLNYKSGVYKHVSTTALGGHAVALIGWGS 320 ENGTPYWIAVNSWSTNWGERGYFRIALGSNESGIESQVYAGLANV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0090460 8 ATSAIIR|KS 0.082 . NF0090460 9 TSAIIRK|SA 0.144 . NF0090460 36 ATTIYGR|TQ 0.071 . NF0090460 39 IYGRTQK|NG 0.091 . NF0090460 42 RTQKNGK|SA 0.127 . NF0090460 46 NGKSASK|KT 0.064 . NF0090460 47 GKSASKK|TK 0.155 . NF0090460 49 SASKKTK|PS 0.111 . NF0090460 64 HHNNSTR|PV 0.170 . NF0090460 67 NSTRPVK|PH 0.117 . NF0090460 70 RPVKPHK|PE 0.069 . NF0090460 88 DDDLIER|IN 0.072 . NF0090460 98 NHTIGWK|AT 0.059 . NF0090460 101 IGWKATK|YA 0.081 . NF0090460 104 KATKYAR|FE 0.093 . NF0090460 114 MTIGHLR|NS 0.093 . NF0090460 131 NDPDTPR|IE 0.102 . NF0090460 137 RIEGEVR|VQ 0.072 . NF0090460 147 PASFDAR|TA 0.117 . NF0090460 152 ARTAWPR|CV 0.157 . NF0090460 158 RCVLPIR|DQ 0.095 . NF0090460 178 AYVLAQR|YC 0.076 . NF0090460 204 DCDSLER|GC 0.073 . NF0090460 216 YLSSTWR|FL 0.123 . NF0090460 235 IPYVSGR|TT 0.159 . NF0090460 250 SCQSQCK|DG 0.082 . NF0090460 256 KDGSALR|FY 0.090 . NF0090460 259 SALRFYK|AK 0.169 . NF0090460 261 LRFYKAK|SA 0.183 . NF0090460 267 KSASIIR|GV 0.198 . NF0090460 273 RGVDQIK|IA 0.067 . NF0090460 290 AGFTVYR|DF 0.095 . NF0090460 296 RDFLNYK|SG 0.068 . NF0090460 301 YKSGVYK|HV 0.126 . NF0090460 340 STNWGER|GY 0.102 . NF0090460 344 GERGYFR|IA 0.115 . ____________________________^_________________

  • Fasta :-

    >NF0090460 ATGGCAACTTCAGCCATCATCAGAAAATCAGCTCTACATCTATTCCTACTTGCCTGTATT GTGGCATTGTGCTACTTGTCTTTATCAGCCACTACCATCTATGGACGTACACAAAAGAAT GGCAAATCAGCCTCCAAGAAGACCAAACCTTCTCATAATCATGGTGGACAACATCACAAC AATTCCACTAGACCTGTAAAACCACACAAACCTGAAGTGGTAAATGGTACTACACCTGCC AATGATGATGATCTCATTGAAAGAATTAACACCAATCATACCATTGGATGGAAAGCCACC AAATACGCTCGTTTCGAAAATATGACCATTGGACACCTCAGAAATTCTTTATTTGGTTTG AGTTTGTTACCCAACGATCCAGACACACCTAGAATTGAAGGTGAAGTAAGAGTTCAATTG CCAGCTTCGTTCGATGCTAGAACTGCTTGGCCACGATGTGTTCTTCCAATTCGTGATCAA CAAAGTTGTGGTGCTTGTTGGGCCTTCTCTAGTGCCTATGTGTTGGCTCAGAGATATTGT GTGGCCACTGGTGCTAATTCCTATACTGTACTCTCACCTGAATATCAAGTCGATTGTGAT TCATTGGAAAGAGGATGTCAAGGAGGTTATTTGAGTAGTACTTGGAGATTCTTGACCAAT ACTGGAACTGTTCCTGATACTTGCATTCCTTATGTTTCAGGAAGAACAACTTCAGCTGGT TCTGCTCAATCATGTCAATCCCAATGCAAGGATGGATCTGCACTCAGATTTTACAAGGCC AAATCAGCAAGTATTATTCGAGGTGTTGACCAAATTAAGATTGCTATCATGACTTATGGT TCTGTGCAAGCTGGATTCACTGTTTATAGAGATTTCTTGAATTACAAGTCAGGAGTTTAC AAGCATGTCTCCACCACTGCTTTGGGTGGTCATGCAGTCGCATTGATTGGATGGGGAAGT GAAAATGGAACTCCATATTGGATTGCTGTTAATTCATGGTCTACCAATTGGGGAGAAAGA GGATACTTTAGAATTGCTCTCGGATCTAATGAGTCAGGCATTGAATCTCAAGTTTATGCT GGTCTTGCAAATGTGTAA
  • Download Fasta

  • Fasta :-

    MATSAIIRKSALHLFLLACIVALCYLSLSATTIYGRTQKNGKSASKKTKPSHNHGGQHHN NSTRPVKPHKPEVVNGTTPANDDDLIERINTNHTIGWKATKYARFENMTIGHLRNSLFGL SLLPNDPDTPRIEGEVRVQLPASFDARTAWPRCVLPIRDQQSCGACWAFSSAYVLAQRYC VATGANSYTVLSPEYQVDCDSLERGCQGGYLSSTWRFLTNTGTVPDTCIPYVSGRTTSAG SAQSCQSQCKDGSALRFYKAKSASIIRGVDQIKIAIMTYGSVQAGFTVYRDFLNYKSGVY KHVSTTALGGHAVALIGWGSENGTPYWIAVNSWSTNWGERGYFRIALGSNESGIESQVYA GLANV

  • title: active site
  • coordinates: Q160,C166,H311,N331
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0090460T2270.5110.020NF0090460T630.5020.042
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0090460T2270.5110.020NF0090460T630.5020.042
IDSitePeptideScoreMethod
NF0090460192 SYTVLSPEYQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India