NF0092160 | predicted protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0092160OTHER0.9999990.0000000.000001
No Results

  • Fasta :-

    >NF0092160 MTNTSSTASNPSSSSSLFDANSGWIHNNNLVLEGIKKWFYEIPFATRCIFVLLTVVFFCV QCFFNYPKIGDVCLSYLDITENHYSDMYRIVSYALFHANLMHYLFNIMAQISLSSLLETH RFKSSIKLFACTFISIVFASISQLVIAWLMDTISLYVFGYNVRSGNFVKGSNKSASSMFN MLNDIPIINECSIGFSGVIFTYLTILSIDGFQSTQSLFGLVTVPSKYYPWILLFVTELLI SNASFVGHLCGIVMGYFYVFVFERNVLISHYYEKLLCQTENMIIPNVVINLECYWPNSQQ KTNLAPSNNSGSFLAHMMETGQVSSSYARSGNGDYWEQLSSSGRTLGYH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0092160.fa Sequence name : NF0092160 Sequence length : 349 VALUES OF COMPUTED PARAMETERS Coef20 : 4.468 CoefTot : -0.128 ChDiff : -3 ZoneTo : 32 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.394 2.718 0.633 0.822 MesoH : 1.046 1.143 0.058 0.534 MuHd_075 : 16.009 11.895 4.714 3.182 MuHd_095 : 12.638 12.622 4.056 2.926 MuHd_100 : 11.374 10.062 3.427 3.065 MuHd_105 : 14.800 10.466 3.766 3.473 Hmax_075 : 11.100 7.117 1.120 2.928 Hmax_095 : 6.600 5.200 0.492 2.380 Hmax_100 : 11.500 8.400 0.094 4.050 Hmax_105 : 12.700 8.800 0.450 2.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9780 0.0220 DFMC : 0.9689 0.0311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 349 NF0092160 MTNTSSTASNPSSSSSLFDANSGWIHNNNLVLEGIKKWFYEIPFATRCIFVLLTVVFFCVQCFFNYPKIGDVCLSYLDIT 80 ENHYSDMYRIVSYALFHANLMHYLFNIMAQISLSSLLETHRFKSSIKLFACTFISIVFASISQLVIAWLMDTISLYVFGY 160 NVRSGNFVKGSNKSASSMFNMLNDIPIINECSIGFSGVIFTYLTILSIDGFQSTQSLFGLVTVPSKYYPWILLFVTELLI 240 SNASFVGHLCGIVMGYFYVFVFERNVLISHYYEKLLCQTENMIIPNVVINLECYWPNSQQKTNLAPSNNSGSFLAHMMET 320 GQVSSSYARSGNGDYWEQLSSSGRTLGYH 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0092160 36 LVLEGIK|KW 0.057 . NF0092160 37 VLEGIKK|WF 0.096 . NF0092160 47 EIPFATR|CI 0.085 . NF0092160 68 CFFNYPK|IG 0.063 . NF0092160 89 HYSDMYR|IV 0.231 . NF0092160 121 SLLETHR|FK 0.086 . NF0092160 123 LETHRFK|SS 0.080 . NF0092160 127 RFKSSIK|LF 0.059 . NF0092160 163 VFGYNVR|SG 0.094 . NF0092160 169 RSGNFVK|GS 0.079 . NF0092160 173 FVKGSNK|SA 0.100 . NF0092160 226 LVTVPSK|YY 0.066 . NF0092160 264 YVFVFER|NV 0.100 . NF0092160 274 ISHYYEK|LL 0.082 . NF0092160 301 WPNSQQK|TN 0.063 . NF0092160 329 VSSSYAR|SG 0.130 . NF0092160 344 QLSSSGR|TL 0.135 . ____________________________^_________________

  • Fasta :-

    >NF0092160 ATGACAAACACATCCTCTACGGCTTCTAACCCTTCTTCTTCGTCCTCTCTATTTGATGCC AATTCCGGCTGGATCCACAATAATAACCTTGTTTTGGAAGGGATCAAGAAATGGTTTTAT GAAATACCTTTTGCAACGAGATGTATTTTTGTACTATTGACTGTTGTATTTTTCTGCGTG CAATGTTTTTTTAATTATCCCAAAATTGGGGATGTTTGTTTGAGTTATTTAGACATCACA GAGAATCACTACTCGGACATGTATCGGATTGTTAGTTATGCTCTTTTTCATGCCAATTTG ATGCATTATTTATTCAATATTATGGCTCAAATTTCTTTGAGTAGTTTATTAGAGACTCAT CGTTTCAAAAGCTCCATCAAACTTTTTGCATGTACCTTCATTTCAATTGTATTTGCATCG ATATCACAACTCGTGATTGCATGGTTAATGGACACAATTTCATTGTATGTCTTTGGTTAC AATGTTAGAAGTGGTAATTTTGTAAAGGGGAGTAACAAGAGTGCCTCTTCCATGTTTAAC ATGTTGAACGATATTCCAATTATCAACGAGTGTTCAATTGGATTTTCCGGTGTGATTTTT ACCTATCTCACCATTCTGTCTATTGATGGATTCCAATCTACCCAGTCACTTTTTGGACTT GTAACTGTTCCGTCCAAGTATTATCCATGGATACTCTTATTTGTGACAGAATTGCTTATT TCGAATGCCTCGTTTGTTGGTCACCTTTGTGGAATTGTGATGGGATATTTTTATGTATTT GTTTTTGAACGAAATGTATTAATTTCGCACTACTATGAAAAACTACTTTGCCAAACTGAA AACATGATCATTCCTAATGTAGTGATAAATTTGGAGTGTTATTGGCCAAATTCTCAACAG AAAACGAATTTGGCACCTTCGAATAATAGTGGATCATTTCTTGCTCACATGATGGAAACG GGACAAGTGTCTTCATCCTATGCAAGATCAGGTAATGGTGATTATTGGGAACAATTGTCA TCAAGCGGAAGGACACTTGGCTACCATTAA
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  • Fasta :-

    MTNTSSTASNPSSSSSLFDANSGWIHNNNLVLEGIKKWFYEIPFATRCIFVLLTVVFFCV QCFFNYPKIGDVCLSYLDITENHYSDMYRIVSYALFHANLMHYLFNIMAQISLSSLLETH RFKSSIKLFACTFISIVFASISQLVIAWLMDTISLYVFGYNVRSGNFVKGSNKSASSMFN MLNDIPIINECSIGFSGVIFTYLTILSIDGFQSTQSLFGLVTVPSKYYPWILLFVTELLI SNASFVGHLCGIVMGYFYVFVFERNVLISHYYEKLLCQTENMIIPNVVINLECYWPNSQQ KTNLAPSNNSGSFLAHMMETGQVSSSYARSGNGDYWEQLSSSGRTLGYH

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0092160T20.7230.063NF0092160T40.6860.027NF0092160T70.6450.172NF0092160S50.5900.032NF0092160S60.5470.020NF0092160S90.5050.043
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0092160T20.7230.063NF0092160T40.6860.027NF0092160T70.6450.172NF0092160S50.5900.032NF0092160S60.5470.020NF0092160S90.5050.043
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India