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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0096880.fa
Sequence name : NF0096880
Sequence length : 299
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.457
CoefTot : 0.650
ChDiff : 1
ZoneTo : 23
KR : 3
DE : 0
CleavSite : 14
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.124 1.265 0.079 0.521
MesoH : -0.459 0.127 -0.388 0.174
MuHd_075 : 20.009 13.426 5.951 3.484
MuHd_095 : 31.544 16.769 8.669 6.859
MuHd_100 : 38.857 22.141 11.203 8.232
MuHd_105 : 39.020 25.019 11.549 8.417
Hmax_075 : 10.600 5.600 1.013 2.580
Hmax_095 : 8.838 10.700 1.610 3.820
Hmax_100 : 12.000 11.600 2.156 4.040
Hmax_105 : 12.367 11.600 2.204 4.040
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3556 0.6444
DFMC : 0.2908 0.7092
This protein is probably imported in chloroplast.
f(Ser) = 0.3043 f(Arg) = 0.0435 CMi = 2.32558
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
299 NF0096880
MLSLPSSKYSLRAGSSLSKVLNTDFSQISIGHHDEEEDLSIMNPMGDLSFGLNGQMGFTLPPGMNNAGFLSQKEKLEKTY 80
AKGTTTLGFVFNRGIVIAVDSRASMGNYISSQNVKKVIEINPYLLGTMAGGAADCQFWERYLGMQCRLYELRNKRRISVA 160
AASKLLSNIVYQYKNYGLSMGTMIAGWDHTGPNLFMVDNDGTRLKGTRFSVGSGSLYAYGVLDQGYRPDLTEEEACELGR 240
RAIYHATHRDAYSGGIINVYLIRSDGWTKISSTDMNDLHYGKYALEKGAITPPLLLDSN 320
................................................................................ 80
................................................................................ 160
................................................................................ 240
........................................................... 320
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0096880 8 LSLPSSK|YS 0.067 .
NF0096880 12 SSKYSLR|AG 0.086 .
NF0096880 19 AGSSLSK|VL 0.066 .
NF0096880 73 AGFLSQK|EK 0.058 .
NF0096880 75 FLSQKEK|LE 0.075 .
NF0096880 78 QKEKLEK|TY 0.071 .
NF0096880 82 LEKTYAK|GT 0.087 .
NF0096880 93 LGFVFNR|GI 0.114 .
NF0096880 102 VIAVDSR|AS 0.085 .
NF0096880 115 ISSQNVK|KV 0.097 .
NF0096880 116 SSQNVKK|VI 0.133 .
NF0096880 140 DCQFWER|YL 0.116 .
NF0096880 147 YLGMQCR|LY 0.083 .
NF0096880 152 CRLYELR|NK 0.078 .
NF0096880 154 LYELRNK|RR 0.054 .
NF0096880 155 YELRNKR|RI 0.456 .
NF0096880 156 ELRNKRR|IS 0.146 .
NF0096880 164 SVAAASK|LL 0.067 .
NF0096880 174 NIVYQYK|NY 0.074 .
NF0096880 203 VDNDGTR|LK 0.084 .
NF0096880 205 NDGTRLK|GT 0.072 .
NF0096880 208 TRLKGTR|FS 0.108 .
NF0096880 227 VLDQGYR|PD 0.073 .
NF0096880 240 EACELGR|RA 0.085 .
NF0096880 241 ACELGRR|AI 0.127 .
NF0096880 249 IYHATHR|DA 0.153 .
NF0096880 263 INVYLIR|SD 0.124 .
NF0096880 269 RSDGWTK|IS 0.067 .
NF0096880 282 NDLHYGK|YA 0.068 .
NF0096880 287 GKYALEK|GA 0.073 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation