NF0098540 | serine protease family

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_IDPredictionOTHERSPmTPCS_Position
NF0098540OTHER0.9980950.0018550.000051
No Results

  • Fasta :-

    >NF0098540 MIPIDLLVFRPPNPPSYSPPENSIENQINTDLKSTFYITPSFLNTTKPFKYFLNDGNEES QKLSAFFCEYPGARATILYSHGNAEDIGQLRKWMTYLSKMLKCNTMTYDYQGYGCSNNTP TEKHFFSDIRLTFKFLTDVLNIPSEEIIIYGRSIGSGPTTDLLKECVENNIQIKGAIFQS PLLSAVKTRFNLFTVPDFFISDMMKNEEKMASINHLSFLKKIPILIFHGKKDVVVPYDHG LTLFRIAVNKFQANEKSCARFISLPDAGHNNCENLYLEDMIYEIKKFILHRNEEVLSSEG AYFEKKSIMIQDDSTK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0098540.fa Sequence name : NF0098540 Sequence length : 316 VALUES OF COMPUTED PARAMETERS Coef20 : 3.043 CoefTot : -1.697 ChDiff : -3 ZoneTo : 20 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.318 1.124 -0.040 0.445 MesoH : -0.670 0.345 -0.387 0.210 MuHd_075 : 21.505 11.277 4.960 4.524 MuHd_095 : 17.829 8.300 4.528 3.968 MuHd_100 : 14.476 8.487 4.227 3.224 MuHd_105 : 12.630 7.147 3.355 3.134 Hmax_075 : 10.383 9.450 1.395 4.270 Hmax_095 : 7.262 4.638 0.343 3.675 Hmax_100 : 12.100 6.900 0.843 3.780 Hmax_105 : 12.100 9.917 1.510 4.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9912 0.0088 DFMC : 0.9918 0.0082
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 316 NF0098540 MIPIDLLVFRPPNPPSYSPPENSIENQINTDLKSTFYITPSFLNTTKPFKYFLNDGNEESQKLSAFFCEYPGARATILYS 80 HGNAEDIGQLRKWMTYLSKMLKCNTMTYDYQGYGCSNNTPTEKHFFSDIRLTFKFLTDVLNIPSEEIIIYGRSIGSGPTT 160 DLLKECVENNIQIKGAIFQSPLLSAVKTRFNLFTVPDFFISDMMKNEEKMASINHLSFLKKIPILIFHGKKDVVVPYDHG 240 LTLFRIAVNKFQANEKSCARFISLPDAGHNNCENLYLEDMIYEIKKFILHRNEEVLSSEGAYFEKKSIMIQDDSTK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0098540 10 IDLLVFR|PP 0.073 . NF0098540 33 QINTDLK|ST 0.108 . NF0098540 47 SFLNTTK|PF 0.061 . NF0098540 50 NTTKPFK|YF 0.060 . NF0098540 62 GNEESQK|LS 0.055 . NF0098540 74 CEYPGAR|AT 0.083 . NF0098540 91 EDIGQLR|KW 0.091 . NF0098540 92 DIGQLRK|WM 0.070 . NF0098540 99 WMTYLSK|ML 0.063 . NF0098540 102 YLSKMLK|CN 0.066 . NF0098540 123 NNTPTEK|HF 0.062 . NF0098540 130 HFFSDIR|LT 0.100 . NF0098540 134 DIRLTFK|FL 0.081 . NF0098540 152 EIIIYGR|SI 0.176 . NF0098540 164 PTTDLLK|EC 0.053 . NF0098540 174 ENNIQIK|GA 0.079 . NF0098540 187 PLLSAVK|TR 0.053 . NF0098540 189 LSAVKTR|FN 0.134 . NF0098540 205 FISDMMK|NE 0.066 . NF0098540 209 MMKNEEK|MA 0.077 . NF0098540 220 NHLSFLK|KI 0.059 . NF0098540 221 HLSFLKK|IP 0.143 . NF0098540 230 ILIFHGK|KD 0.067 . NF0098540 231 LIFHGKK|DV 0.133 . NF0098540 245 HGLTLFR|IA 0.083 . NF0098540 250 FRIAVNK|FQ 0.071 . NF0098540 256 KFQANEK|SC 0.071 . NF0098540 260 NEKSCAR|FI 0.096 . NF0098540 285 DMIYEIK|KF 0.057 . NF0098540 286 MIYEIKK|FI 0.109 . NF0098540 291 KKFILHR|NE 0.081 . NF0098540 305 EGAYFEK|KS 0.069 . NF0098540 306 GAYFEKK|SI 0.217 . NF0098540 316 IQDDSTK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >NF0098540 ATGATCCCGATTGATTTATTGGTGTTTAGACCTCCTAACCCACCATCATATTCTCCTCCC GAAAATTCAATAGAAAACCAGATCAATACGGATTTGAAATCTACATTTTACATTACACCA TCGTTCCTGAATACCACAAAACCCTTCAAATACTTTCTCAACGACGGAAATGAGGAATCA CAGAAATTAAGTGCGTTCTTTTGTGAATACCCAGGAGCTCGTGCCACAATATTATACTCG CACGGTAACGCAGAAGATATAGGCCAACTACGAAAATGGATGACCTATTTGAGCAAAATG CTGAAATGTAACACCATGACATATGATTACCAAGGATATGGTTGCTCGAATAATACACCA ACAGAAAAGCATTTCTTCTCAGACATTCGATTGACATTCAAGTTTTTAACGGACGTTTTA AACATACCTTCTGAAGAAATAATAATATATGGCCGATCTATTGGATCAGGTCCAACTACC GATTTACTGAAAGAATGTGTCGAAAATAACATTCAAATTAAGGGAGCAATATTTCAATCA CCTTTGCTAAGCGCCGTGAAAACAAGATTTAATTTATTTACCGTTCCAGATTTCTTCATA AGTGACATGATGAAAAATGAAGAAAAGATGGCCTCAATTAATCATTTGAGTTTTTTGAAG AAAATACCTATTCTCATATTTCACGGAAAGAAGGATGTTGTGGTTCCGTACGACCACGGA TTGACACTATTTCGAATCGCTGTAAACAAATTTCAGGCAAATGAGAAATCGTGTGCTCGT TTTATATCATTACCAGATGCAGGTCACAATAATTGTGAAAATCTCTATTTAGAAGATATG ATCTATGAAATCAAGAAATTTATTTTACATCGAAATGAGGAAGTGTTATCGTCAGAAGGA GCATATTTTGAAAAGAAATCAATCATGATTCAAGATGATTCAACGAAATGA
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  • Fasta :-

    MIPIDLLVFRPPNPPSYSPPENSIENQINTDLKSTFYITPSFLNTTKPFKYFLNDGNEES QKLSAFFCEYPGARATILYSHGNAEDIGQLRKWMTYLSKMLKCNTMTYDYQGYGCSNNTP TEKHFFSDIRLTFKFLTDVLNIPSEEIIIYGRSIGSGPTTDLLKECVENNIQIKGAIFQS PLLSAVKTRFNLFTVPDFFISDMMKNEEKMASINHLSFLKKIPILIFHGKKDVVVPYDHG LTLFRIAVNKFQANEKSCARFISLPDAGHNNCENLYLEDMIYEIKKFILHRNEEVLSSEG AYFEKKSIMIQDDSTK

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India