NF0102750 | cysteine proteinase rd19a-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0102750OTHER0.9678810.0269290.005190
No Results

  • Fasta :-

    >NF0102750 MLYQNPLIGVIKEPSLRSKIKQGEYSCWAFSTIQNIEGQYFLNGNPLTKFSPQQLVDCDP LNCGCFGGYPYVAMEYLKARGGLTTEQDYPYCIPPLGNCFPCNTNKTYCPSPEYCNRTCG VTNAELVAKIAGYENVSTNEDEIAAYLVKHGPLSIGLNAVWLQFYHSGISDPMWCPPDID HAVLLVGFGVHTNWIGEKTKYWIVKNSWGESWGEKGMFQKSILLQLILTFR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0102750.fa Sequence name : NF0102750 Sequence length : 231 VALUES OF COMPUTED PARAMETERS Coef20 : 3.682 CoefTot : -0.818 ChDiff : -3 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.882 1.059 0.124 0.551 MesoH : -0.249 0.309 -0.291 0.315 MuHd_075 : 25.299 18.676 5.986 4.614 MuHd_095 : 21.980 10.521 6.524 3.786 MuHd_100 : 16.484 6.735 3.978 2.014 MuHd_105 : 12.769 5.057 2.031 1.175 Hmax_075 : 5.483 6.825 -0.852 2.683 Hmax_095 : 9.450 9.625 1.340 4.393 Hmax_100 : 9.500 9.600 0.649 3.330 Hmax_105 : 8.700 8.800 0.317 3.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7310 0.2690 DFMC : 0.8301 0.1699
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 231 NF0102750 MLYQNPLIGVIKEPSLRSKIKQGEYSCWAFSTIQNIEGQYFLNGNPLTKFSPQQLVDCDPLNCGCFGGYPYVAMEYLKAR 80 GGLTTEQDYPYCIPPLGNCFPCNTNKTYCPSPEYCNRTCGVTNAELVAKIAGYENVSTNEDEIAAYLVKHGPLSIGLNAV 160 WLQFYHSGISDPMWCPPDIDHAVLLVGFGVHTNWIGEKTKYWIVKNSWGESWGEKGMFQKSILLQLILTFR 240 ................................................................................ 80 ................................................................................ 160 ....................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0102750 12 PLIGVIK|EP 0.057 . NF0102750 17 IKEPSLR|SK 0.160 . NF0102750 19 EPSLRSK|IK 0.074 . NF0102750 21 SLRSKIK|QG 0.083 . NF0102750 49 NGNPLTK|FS 0.074 . NF0102750 78 VAMEYLK|AR 0.063 . NF0102750 80 MEYLKAR|GG 0.108 . NF0102750 106 FPCNTNK|TY 0.067 . NF0102750 117 SPEYCNR|TC 0.099 . NF0102750 129 NAELVAK|IA 0.087 . NF0102750 149 IAAYLVK|HG 0.057 . NF0102750 198 TNWIGEK|TK 0.068 . NF0102750 200 WIGEKTK|YW 0.079 . NF0102750 205 TKYWIVK|NS 0.076 . NF0102750 215 GESWGEK|GM 0.070 . NF0102750 220 EKGMFQK|SI 0.091 . NF0102750 231 QLILTFR|-- 0.084 . ____________________________^_________________

  • Fasta :-

    >NF0102750 ATGCTCGCGCGTGGTTCAAGAATGAAAAGCCTTGATTTCATCGTTGGGATGTTCGTTGTC CTTGTGATGATGATGACCACCATTCTTGCAATGATGACCAACAACAAGACTGTGGAAGGT CAAGGAATTCCTCTCAAAGTATTCTTGGGAGGTCCCTATGATACTTCCGAGGCTAAAAGT TTGTTTGAGAAATTCAAAGTTGCCTTTCATAAGAAGTATGGCTCAGAGATGGAACACGAA AAGAGATGGAAGATATTTTATGAAAACATTAATTATGTGAATCAATTGAATATTATGCAC ATGAAAGAGAAGAAGGAAGTGGAATATGGAATTACGAAATTTATGGACATGACACCTCAG GAATTTAGTCAACAAAAATTACTTCCAGTCACCAAACATGAAGATGTTAAACATGTACCA ACCACTCCAAAAGAAAAGTATGGAGATGTGAATGCTTTACCAGAATCCTTTGATTGGCGT GATAAAGGAGCCGTCACTCCGGTCAAAGATCAAGCAAGGTGAGTATAGTTGTTGGGCATT CAGTACCATTCAAAACATTGAAGGTCAATACTTTTTAAACGGTAATCCTTTGACAAAATT TTCTCCTCAACAGTTAGTTGATTGTGATCCATTGAACTGTGGCTGTTTTGGAGGTTATCC ATATGTTGCTATGGAATATTTAAAGGCCAGAGGAGGCTTGACAACAGAACAAGATTATCC ATATTGCATTCCACCGCTTGGAAATTGTTTCCCTTGCAATACTAATAAGACGTATTGTCC AAGCCCAGAATATTGCAATCGTACTTGTGGTGTCACAAATGCTGAGTTAGTGGCTAAGAT TGCTGGTTATGAAAATGTTTCAACAAATGAGGATGAAATTGCTGCTTATTTAGTCAAACA TGGTCCATTGTCAATTGGATTGAATGCTGTATGGTTGCAATTTTATCATAGTGGAATCAG TGACCCAATGTGGTGCCCTCCAGACATTGATCATGCTGTATTGCTTGTTGGTTTTGGAGT TCACACCAATTGGATCGGAGAAAAAACCAAATATTGGATTGTTAAGAACAGTTGGGGAGA AAGTTGGGGAGAAAAAGGTATGTTTCAGAAGTCAATTCTTTTACAACTTATTCTCACATT TCGATAA
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  • Fasta :-

    MLYQNPLIGVIKEPSLRSKIKQGEYSCWAFSTIQNIEGQYFLNGNPLTKFSPQQLVDCDP LNCGCFGGYPYVAMEYLKARGGLTTEQDYPYCIPPLGNCFPCNTNKTYCPSPEYCNRTCG VTNAELVAKIAGYENVSTNEDEIAAYLVKHGPLSIGLNAVWLQFYHSGISDPMWCPPDID HAVLLVGFGVHTNWIGEKTKYWIVKNSWGESWGEKGMFQKSILLQLILTFR

  • title: S2 subsite
  • coordinates: Y69,P70,G156,I179,A182
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India