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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0111530.fa
Sequence name : NF0111530
Sequence length : 738
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.283
CoefTot : -1.772
ChDiff : -3
ZoneTo : 61
KR : 4
DE : 1
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.812 1.565 0.295 0.705
MesoH : -0.264 0.262 -0.321 0.287
MuHd_075 : 17.789 17.434 7.307 4.509
MuHd_095 : 30.006 30.913 10.154 8.667
MuHd_100 : 35.762 31.933 11.601 8.971
MuHd_105 : 38.908 29.597 12.078 9.283
Hmax_075 : 12.250 12.000 2.170 4.982
Hmax_095 : 13.737 18.200 1.726 6.072
Hmax_100 : 18.700 21.500 3.557 6.650
Hmax_105 : 17.850 20.533 3.381 6.323
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3955 0.6045
DFMC : 0.4842 0.5158
This protein is probably imported in chloroplast.
f(Ser) = 0.1475 f(Arg) = 0.0164 CMi = 1.58730
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
738 NF0111530
MLSSQSSPTFLIQFNSLIKNRLGQLFKHLASSTNPVLGYLIGMNGNDQVHILNFMKSLSNVDQSELDLMKLMMIPKGLEI 80
VGLYTTQGTLAKYHGSEVVIGSEAPETEKVITSWLSSQFPSLFSKENNFKQLLVMVGGGSSSPLEVFNFNISDKTAQVIR 160
QDAIREFSEISIVGDKHELQQHVKASTTAFIISRLHCDLIIPYTFDPQASTNSDQSMTETFKKHIDSYIDTLKSEEKTLI 240
RSASLSTDNSAEQSSKKNKSTLSTTASVAPIEIRGRESTIESILPEKLTVVDTSSQQLKVDANFNKKEMTSKNKKKKLPK 320
QTLGEFLKLSEHKSDENTTSSTVKTISKFLHFDAFLNLSPNQYGSGIIISSDKKHTNCKLSLETTSYIPIYQKGTMVNNL 400
DNLRQVLVEGLADQLVFVKKYFGSGSFLLPHIGXXXXXXXXGFYPFLPKDYPHVFTCCYPFYSDDIVFEQRNEQNAIKLR 480
EEYHKRLYFSLKQPFIRTNQALTFGPSPKTKISEFNKKILNVHLYAGYPSTIKSTNPNNLHLVRGDYLYSHYCQDKFNDE 560
GWGCAYRSLQTLISHAQYHAGAVVVNLPTHQEIQKCLVDCGDKQASFLGSRQWIGAFENTIVLEKWCGVQSKVLYVNRGD 640
EMNSHARTIANHFDVNGSPIMIGGGVLAYTMLGIEFDELTGECSYLILDPHFTGSINDPEYLEDIISGGWCGWKTREQVF 720
KDSVFYNLCMPQLSSEGV 800
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
.................. 800
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0111530 19 QFNSLIK|NR 0.057 .
NF0111530 21 NSLIKNR|LG 0.072 .
NF0111530 27 RLGQLFK|HL 0.067 .
NF0111530 56 HILNFMK|SL 0.094 .
NF0111530 70 SELDLMK|LM 0.054 .
NF0111530 76 KLMMIPK|GL 0.082 .
NF0111530 92 TQGTLAK|YH 0.078 .
NF0111530 109 EAPETEK|VI 0.059 .
NF0111530 125 FPSLFSK|EN 0.069 .
NF0111530 130 SKENNFK|QL 0.068 .
NF0111530 154 NFNISDK|TA 0.077 .
NF0111530 160 KTAQVIR|QD 0.103 .
NF0111530 165 IRQDAIR|EF 0.102 .
NF0111530 176 ISIVGDK|HE 0.057 .
NF0111530 184 ELQQHVK|AS 0.073 .
NF0111530 194 TAFIISR|LH 0.080 .
NF0111530 222 SMTETFK|KH 0.059 .
NF0111530 223 MTETFKK|HI 0.165 .
NF0111530 233 SYIDTLK|SE 0.077 .
NF0111530 237 TLKSEEK|TL 0.062 .
NF0111530 241 EEKTLIR|SA 0.133 .
NF0111530 256 SAEQSSK|KN 0.064 .
NF0111530 257 AEQSSKK|NK 0.107 .
NF0111530 259 QSSKKNK|ST 0.118 .
NF0111530 274 VAPIEIR|GR 0.089 .
NF0111530 276 PIEIRGR|ES 0.073 .
NF0111530 287 ESILPEK|LT 0.057 .
NF0111530 299 TSSQQLK|VD 0.068 .
NF0111530 306 VDANFNK|KE 0.066 .
NF0111530 307 DANFNKK|EM 0.086 .
NF0111530 312 KKEMTSK|NK 0.069 .
NF0111530 314 EMTSKNK|KK 0.055 .
NF0111530 315 MTSKNKK|KK 0.116 .
NF0111530 316 TSKNKKK|KL 0.173 .
NF0111530 317 SKNKKKK|LP 0.168 .
NF0111530 320 KKKKLPK|QT 0.070 .
NF0111530 328 TLGEFLK|LS 0.066 .
NF0111530 333 LKLSEHK|SD 0.082 .
NF0111530 344 TTSSTVK|TI 0.098 .
NF0111530 348 TVKTISK|FL 0.063 .
NF0111530 373 IIISSDK|KH 0.057 .
NF0111530 374 IISSDKK|HT 0.117 .
NF0111530 379 KKHTNCK|LS 0.059 .
NF0111530 393 YIPIYQK|GT 0.059 .
NF0111530 404 NNLDNLR|QV 0.084 .
NF0111530 419 DQLVFVK|KY 0.064 .
NF0111530 420 QLVFVKK|YF 0.146 .
NF0111530 449 FYPFLPK|DY 0.069 .
NF0111530 471 DIVFEQR|NE 0.074 .
NF0111530 478 NEQNAIK|LR 0.060 .
NF0111530 480 QNAIKLR|EE 0.095 .
NF0111530 485 LREEYHK|RL 0.074 .
NF0111530 486 REEYHKR|LY 0.132 .
NF0111530 492 RLYFSLK|QP 0.072 .
NF0111530 497 LKQPFIR|TN 0.101 .
NF0111530 509 TFGPSPK|TK 0.068 .
NF0111530 511 GPSPKTK|IS 0.088 .
NF0111530 517 KISEFNK|KI 0.067 .
NF0111530 518 ISEFNKK|IL 0.117 .
NF0111530 533 GYPSTIK|ST 0.071 .
NF0111530 544 NNLHLVR|GD 0.076 .
NF0111530 556 SHYCQDK|FN 0.083 .
NF0111530 567 GWGCAYR|SL 0.143 .
NF0111530 595 THQEIQK|CL 0.070 .
NF0111530 603 LVDCGDK|QA 0.058 .
NF0111530 611 ASFLGSR|QW 0.087 .
NF0111530 625 NTIVLEK|WC 0.064 .
NF0111530 632 WCGVQSK|VL 0.073 .
NF0111530 638 KVLYVNR|GD 0.091 .
NF0111530 647 EMNSHAR|TI 0.105 .
NF0111530 714 GGWCGWK|TR 0.067 .
NF0111530 716 WCGWKTR|EQ 0.082 .
NF0111530 721 TREQVFK|DS 0.090 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation