NF0113550 | peptidase d

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0113550OTHER0.5512980.0006850.448017
No Results

  • Fasta :-

    >NF0113550 MMTSAILRTSANRKTFREAFYAAAKLKGEAFTHNAAYFIQGGDIKLRTNNSDVELTFRQE SNFYYLSGCSEPGCALLLNPSISESVLFVPQYDDEYALWCGEYPVAEDYKQKLGFSRVEY KSESAVASILKEWKIQKVYAFDQDSKNSSLLNPKTLEPGVEVISDETSRTFYVLVKDLRL IKTQEEIEIMRRMCQISGAAHVKCMQRARPGINERELDAVFRYETMVNGGSIFQAYDPIV AGDDRGATLHYIRNDEIIHDGSLVLLDAGAETHGSLYASDITRVFPVNGKFSDKQRQIYQ IVLDAQMQVLASMKPGVKWEDMHRLALRVMTKCLYELGILKVDGKQGDEAVEELMQHHAG SIFFPHGLGHALGLDVHDPPNRDGTFEKINEPGIRNLRLRVTLQKGMVLTVEPGLYFNKR MIANALKDENLQKYLNASLINDYMSVGGIRIEDDVAITEDGIDNLCAGVPKTIEEIEKIM SKQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0113550.fa Sequence name : NF0113550 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 5.095 CoefTot : 0.786 ChDiff : -12 ZoneTo : 17 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.029 1.400 0.137 0.529 MesoH : -0.886 0.070 -0.449 0.158 MuHd_075 : 53.254 28.576 12.245 11.399 MuHd_095 : 11.947 1.736 2.629 2.297 MuHd_100 : 13.549 5.341 2.600 2.138 MuHd_105 : 19.222 8.114 4.577 3.666 Hmax_075 : 13.417 9.917 1.679 3.558 Hmax_095 : -3.763 2.800 -3.188 1.129 Hmax_100 : -3.800 2.300 -3.019 0.530 Hmax_105 : 9.567 7.933 -0.315 3.535 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2856 0.7144 DFMC : 0.2781 0.7219 This protein is probably imported in mitochondria. f(Ser) = 0.1176 f(Arg) = 0.1765 CMi = 0.37106 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 NF0113550 MMTSAILRTSANRKTFREAFYAAAKLKGEAFTHNAAYFIQGGDIKLRTNNSDVELTFRQESNFYYLSGCSEPGCALLLNP 80 SISESVLFVPQYDDEYALWCGEYPVAEDYKQKLGFSRVEYKSESAVASILKEWKIQKVYAFDQDSKNSSLLNPKTLEPGV 160 EVISDETSRTFYVLVKDLRLIKTQEEIEIMRRMCQISGAAHVKCMQRARPGINERELDAVFRYETMVNGGSIFQAYDPIV 240 AGDDRGATLHYIRNDEIIHDGSLVLLDAGAETHGSLYASDITRVFPVNGKFSDKQRQIYQIVLDAQMQVLASMKPGVKWE 320 DMHRLALRVMTKCLYELGILKVDGKQGDEAVEELMQHHAGSIFFPHGLGHALGLDVHDPPNRDGTFEKINEPGIRNLRLR 400 VTLQKGMVLTVEPGLYFNKRMIANALKDENLQKYLNASLINDYMSVGGIRIEDDVAITEDGIDNLCAGVPKTIEEIEKIM 480 SKQ 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0113550 8 MTSAILR|TS 0.074 . NF0113550 13 LRTSANR|KT 0.086 . NF0113550 14 RTSANRK|TF 0.099 . NF0113550 17 ANRKTFR|EA 0.130 . NF0113550 25 AFYAAAK|LK 0.072 . NF0113550 27 YAAAKLK|GE 0.065 . NF0113550 45 IQGGDIK|LR 0.056 . NF0113550 47 GGDIKLR|TN 0.079 . NF0113550 58 DVELTFR|QE 0.071 . NF0113550 110 PVAEDYK|QK 0.059 . NF0113550 112 AEDYKQK|LG 0.060 . NF0113550 117 QKLGFSR|VE 0.096 . NF0113550 121 FSRVEYK|SE 0.100 . NF0113550 131 AVASILK|EW 0.060 . NF0113550 134 SILKEWK|IQ 0.057 . NF0113550 137 KEWKIQK|VY 0.059 . NF0113550 146 AFDQDSK|NS 0.055 . NF0113550 154 SSLLNPK|TL 0.070 . NF0113550 169 ISDETSR|TF 0.079 . NF0113550 176 TFYVLVK|DL 0.077 . NF0113550 179 VLVKDLR|LI 0.092 . NF0113550 182 KDLRLIK|TQ 0.123 . NF0113550 191 EEIEIMR|RM 0.075 . NF0113550 192 EIEIMRR|MC 0.118 . NF0113550 203 SGAAHVK|CM 0.079 . NF0113550 207 HVKCMQR|AR 0.078 . NF0113550 209 KCMQRAR|PG 0.092 . NF0113550 215 RPGINER|EL 0.133 . NF0113550 222 ELDAVFR|YE 0.097 . NF0113550 245 IVAGDDR|GA 0.088 . NF0113550 253 ATLHYIR|ND 0.086 . NF0113550 283 YASDITR|VF 0.086 . NF0113550 290 VFPVNGK|FS 0.070 . NF0113550 294 NGKFSDK|QR 0.062 . NF0113550 296 KFSDKQR|QI 0.169 . NF0113550 314 QVLASMK|PG 0.065 . NF0113550 318 SMKPGVK|WE 0.059 . NF0113550 324 KWEDMHR|LA 0.081 . NF0113550 328 MHRLALR|VM 0.089 . NF0113550 332 ALRVMTK|CL 0.068 . NF0113550 341 YELGILK|VD 0.060 . NF0113550 345 ILKVDGK|QG 0.069 . NF0113550 382 VHDPPNR|DG 0.079 . NF0113550 388 RDGTFEK|IN 0.091 . NF0113550 395 INEPGIR|NL 0.083 . NF0113550 398 PGIRNLR|LR 0.125 . NF0113550 400 IRNLRLR|VT 0.139 . NF0113550 405 LRVTLQK|GM 0.059 . NF0113550 419 PGLYFNK|RM 0.054 . NF0113550 420 GLYFNKR|MI 0.323 . NF0113550 427 MIANALK|DE 0.062 . NF0113550 433 KDENLQK|YL 0.078 . NF0113550 450 MSVGGIR|IE 0.096 . NF0113550 471 LCAGVPK|TI 0.091 . NF0113550 478 TIEEIEK|IM 0.073 . NF0113550 482 IEKIMSK|Q- 0.064 . ____________________________^_________________

  • Fasta :-

    >NF0113550 ATGATGACCTCTGCCATTTTGCGAACAAGTGCAAACCGAAAAACCTTCAGAGAAGCCTTC TACGCTGCTGCAAAATTGAAAGGAGAAGCCTTCACTCATAATGCAGCATACTTTATTCAA GGAGGTGATATTAAACTTAGAACCAACAACAGCGATGTGGAGCTTACATTCCGACAAGAG AGTAATTTCTATTATTTATCGGGTTGCTCAGAGCCTGGATGTGCCTTGTTGTTGAATCCA TCCATCAGTGAATCCGTACTCTTTGTTCCACAATATGATGATGAATATGCATTGTGGTGT GGAGAGTATCCAGTGGCTGAAGACTACAAGCAAAAACTTGGTTTCTCTCGGGTTGAATAC AAATCCGAATCAGCTGTTGCCTCTATTTTGAAGGAATGGAAAATTCAGAAAGTCTATGCC TTTGATCAAGACTCCAAGAACAGCTCATTGCTGAATCCAAAGACTCTTGAACCTGGTGTT GAAGTTATTTCTGATGAAACATCACGAACTTTTTATGTATTGGTGAAGGACTTGAGACTC ATCAAGACCCAAGAGGAAATTGAAATTATGAGAAGAATGTGTCAAATTTCTGGAGCAGCT CACGTCAAATGCATGCAACGTGCAAGACCTGGAATCAATGAACGTGAATTGGATGCTGTT TTTCGTTATGAGACCATGGTGAATGGAGGCTCCATTTTCCAAGCTTATGATCCTATTGTT GCTGGTGACGATCGTGGAGCAACTTTACACTACATTAGAAATGATGAAATTATCCATGAT GGAAGTTTGGTTTTGCTTGATGCTGGTGCTGAAACTCATGGCTCATTATATGCAAGTGAT ATTACAAGAGTTTTTCCAGTGAATGGAAAGTTTTCAGACAAGCAAAGGCAAATTTATCAA ATTGTTCTCGATGCTCAAATGCAAGTTTTAGCTTCTATGAAACCTGGTGTGAAATGGGAA GACATGCATCGATTGGCCTTGCGTGTGATGACGAAATGTCTTTATGAATTGGGTATTTTA AAGGTTGATGGAAAGCAAGGAGATGAAGCTGTCGAAGAATTGATGCAACATCATGCTGGT TCTATATTTTTCCCTCATGGTTTGGGACATGCATTAGGACTTGATGTTCATGATCCTCCA AATAGAGATGGTACTTTCGAAAAGATTAATGAGCCTGGTATTAGAAATCTCAGACTTAGA GTTACTCTACAAAAGGGTATGGTCCTCACTGTTGAACCAGGTCTCTATTTCAACAAGAGA ATGATTGCCAATGCTCTCAAGGATGAAAATCTTCAAAAATACTTGAATGCTTCTTTAATT AATGATTACATGAGTGTTGGAGGTATTAGAATTGAGGATGATGTCGCCATTACTGAAGAT GGTATTGACAATCTTTGTGCAGGAGTTCCAAAAACAATTGAAGAAATTGAAAAGATCATG AGCAAGCAGTAA
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  • Fasta :-

    MMTSAILRTSANRKTFREAFYAAAKLKGEAFTHNAAYFIQGGDIKLRTNNSDVELTFRQE SNFYYLSGCSEPGCALLLNPSISESVLFVPQYDDEYALWCGEYPVAEDYKQKLGFSRVEY KSESAVASILKEWKIQKVYAFDQDSKNSSLLNPKTLEPGVEVISDETSRTFYVLVKDLRL IKTQEEIEIMRRMCQISGAAHVKCMQRARPGINERELDAVFRYETMVNGGSIFQAYDPIV AGDDRGATLHYIRNDEIIHDGSLVLLDAGAETHGSLYASDITRVFPVNGKFSDKQRQIYQ IVLDAQMQVLASMKPGVKWEDMHRLALRVMTKCLYELGILKVDGKQGDEAVEELMQHHAG SIFFPHGLGHALGLDVHDPPNRDGTFEKINEPGIRNLRLRVTLQKGMVLTVEPGLYFNKR MIANALKDENLQKYLNASLINDYMSVGGIRIEDDVAITEDGIDNLCAGVPKTIEEIEKIM SKQ

  • title: active site
  • coordinates: H250,D267,D280,H370,E412,E452
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India