• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004185      

  • Computed_GO_Functions:  serine-type carboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
NF0116430 SP 0.000984 0.999008 0.000008 CS pos: 20-21. VHS-TT. Pr: 0.7388
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >NF0116430 MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQ YSGYVPVSINSTYETRFLFYWFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLL NNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDHVWNDVKSANDVLQFLAIFFS EMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYA NCVGDVGPFVDEKSDEFSQKEESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTR VGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQMCNDVVNGNYNRTYDSMIPFY QELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0116430.fa Sequence name : NF0116430 Sequence length : 519 VALUES OF COMPUTED PARAMETERS Coef20 : 4.467 CoefTot : -1.588 ChDiff : -5 ZoneTo : 73 KR : 2 DE : 1 CleavSite : 47 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.847 2.176 0.349 0.806 MesoH : 0.762 0.782 -0.060 0.426 MuHd_075 : 20.080 17.762 7.522 5.527 MuHd_095 : 19.442 15.808 6.276 4.246 MuHd_100 : 19.965 15.403 5.592 5.037 MuHd_105 : 20.146 15.860 6.102 5.694 Hmax_075 : 16.363 16.450 2.934 5.623 Hmax_095 : 10.000 16.975 3.495 7.534 Hmax_100 : 20.900 21.700 3.776 7.510 Hmax_105 : 17.800 11.300 3.059 5.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7839 0.2161 DFMC : 0.7785 0.2215
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 519 NF0116430 MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQYSGYVPVSINSTYETRFLFY 80 WFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLLNNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDH 160 VWNDVKSANDVLQFLAIFFSEMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED 240 TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYANCVGDVGPFVDEKSDEFSQK 320 EESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTRVGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQM 400 CNDVVNGNYNRTYDSMIPFYQELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI 480 WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0116430 2 -----MK|FL 0.063 . NF0116430 45 AAPPPQR|IT 0.088 . NF0116430 76 NSTYETR|FL 0.093 . NF0116430 89 VESQSAR|PS 0.123 . NF0116430 125 LLNNDGK|TL 0.075 . NF0116430 128 NDGKTLR|AN 0.092 . NF0116430 136 NDYSWNK|RA 0.061 . NF0116430 137 DYSWNKR|AN 0.220 . NF0116430 166 HVWNDVK|SA 0.104 . NF0116430 188 MFPQYVK|NP 0.053 . NF0116430 216 VLHANQR|NQ 0.083 . NF0116430 222 RNQFPFK|FN 0.083 . NF0116430 226 PFKFNLK|GF 0.064 . NF0116430 238 NGIMDDR|ED 0.079 . NF0116430 256 QHSLISK|SS 0.087 . NF0116430 265 YDDGLSK|CK 0.064 . NF0116430 267 DGLSKCK|GD 0.062 . NF0116430 272 CKGDFYK|NQ 0.063 . NF0116430 313 GPFVDEK|SD 0.091 . NF0116430 320 SDEFSQK|EE 0.075 . NF0116430 329 SFLETLK|RN 0.060 . NF0116430 330 FLETLKR|NG 0.148 . NF0116430 335 KRNGWMK|AL 0.086 . NF0116430 340 MKALTQR|PS 0.099 . NF0116430 344 TQRPSFK|NS 0.083 . NF0116430 360 FALSTTR|VG 0.074 . NF0116430 371 APCLAYK|PQ 0.066 . NF0116430 383 FNLNEVK|QA 0.064 . NF0116430 397 LIPQDHR|WQ 0.070 . NF0116430 411 VNGNYNR|TY 0.088 . NF0116430 429 LLSNGIR|GL 0.111 . NF0116430 455 GIYALMK|VM 0.062 . NF0116430 463 MNGQIVK|PY 0.064 . NF0116430 472 QSWMMDK|QV 0.081 . NF0116430 491 STTMTFK|TI 0.080 . NF0116430 494 MTFKTIK|GA 0.100 . NF0116430 504 HMVPMTR|PK 0.091 . NF0116430 506 VPMTRPK|QA 0.097 . ____________________________^_________________
  • Fasta :-

    >NF0116430 ATGAAATTCCTTCCTTTGCTGTTCTTGTTGCTGGCACAATGGCTTCTCGTTGTGCATTCA ACAACGGAATCGGGGTTATTCATCCTTGGTTCTGGTGTTGCTGCTGCTGTTGCTGCTGCT CCTCCTCCTCAACGTATCACTTCTCTCCCTGGTTTCAATGGTCCCATTTCCTTTTCTCAA TATTCGGGTTACGTTCCAGTGAGTATCAATTCCACCTATGAAACGAGATTTTTGTTTTAT TGGTTTGTTGAGTCGCAAAGTGCTCGTCCCAGTGAGGATCCAGTGATTTTGTGGTTGAAT GGTGGACCAGGTTGTAGCAGTTTGGATGGAATGGTCACAGAACATGGTCCATTTCTTCTC AACAATGATGGAAAAACTTTGAGAGCAAATGATTATTCTTGGAATAAGAGAGCAAATATC ATTTATTTAGAATCTCCCTTTGAAGTCGGATATAGTTTTACAACCAATAATAATGATCAT GTTTGGAATGATGTGAAATCAGCAAATGATGTGTTACAATTTTTAGCAATTTTCTTCTCT GAAATGTTTCCACAATATGTGAAAAATCCATTTTATATTGCTGCAGAATCTTATGGAGGA CATTATGGGCCAACCACTGCTGTAGCAGTTTTACATGCCAATCAAAGAAATCAATTTCCA TTCAAATTCAATTTGAAAGGTTTCATTGTCGCTAATGGTATCATGGATGATCGAGAAGAC ACCAATTCCATTCCTCTCTTCATGTATCAACATTCTCTCATTTCCAAATCATCCTACGAC GATGGTTTATCAAAATGCAAAGGTGATTTTTACAAGAATCAAAATTTACCAGAATGTGCC AATGTCATTTCTCAATACTACACGTCCATTGTGGGTGTCAATCCCTATGATATTTATGCA AACTGTGTGGGAGATGTTGGACCATTTGTTGACGAGAAAAGTGATGAATTTTCACAGAAA GAAGAATCTTTTTTGGAAACTTTGAAACGTAATGGATGGATGAAAGCTCTCACTCAAAGA CCATCCTTTAAGAACAGCAATGTCATCATTCATCCATTGTTTGCACTGAGTACAACTCGT GTGGGAAGTGGTGCTCCTTGTCTTGCTTACAAGCCACAAGAAAATTGGTTTAATTTGAAT GAAGTGAAACAAGCACTTCATGCCTCTCCATTAATTCCACAAGATCATCGTTGGCAAATG TGTAATGATGTGGTGAATGGTAATTACAATCGAACGTATGATAGTATGATTCCATTCTAT CAGGAATTGTTATCGAATGGCATTCGAGGGTTGTTTTACTCGGGTGATTGTGATTTGGCT GTGAATTCTCTTGGATCTCAGAATGGAATTTATGCATTGATGAAGGTGATGAATGGACAA ATTGTAAAACCCTATCAATCTTGGATGATGGATAAACAGGTGGCTGGTTTTTATCAAATT TGGAGTGCTGGATCCACCACCATGACATTTAAGACCATTAAGGGAGCAGGACACATGGTA CCAATGACTCGACCAAAACAAGCTCAAACAGTCTTGTATGATTTTATTTTCAACAATTAA
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  • Fasta :-

    MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQ YSGYVPVSINSTYETRFLFYWFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLL NNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDHVWNDVKSANDVLQFLAIFFS EMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYA NCVGDVGPFVDEKSDEFSQKEESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTR VGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQMCNDVVNGNYNRTYDSMIPFY QELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN

    No Results
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ID
Site
Position
Gscore
Iscore
NF0116430 T 47 0.501 0.322
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ID
Site
Position
Gscore
Iscore
NF0116430 T 47 0.501 0.322
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
NF0116430 258 S ISKSSYDDG 0.993 unsp NF0116430 258 S ISKSSYDDG 0.993 unsp NF0116430 258 S ISKSSYDDG 0.993 unsp NF0116430 318 S SDEFSQKEE 0.997 unsp NF0116430 71 S VSINSTYET 0.993 unsp NF0116430 257 S LISKSSYDD 0.992 unsp
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India