Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0116430.fa
Sequence name : NF0116430
Sequence length : 519
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.467
CoefTot : -1.588
ChDiff : -5
ZoneTo : 73
KR : 2
DE : 1
CleavSite : 47
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.847 2.176 0.349 0.806
MesoH : 0.762 0.782 -0.060 0.426
MuHd_075 : 20.080 17.762 7.522 5.527
MuHd_095 : 19.442 15.808 6.276 4.246
MuHd_100 : 19.965 15.403 5.592 5.037
MuHd_105 : 20.146 15.860 6.102 5.694
Hmax_075 : 16.363 16.450 2.934 5.623
Hmax_095 : 10.000 16.975 3.495 7.534
Hmax_100 : 20.900 21.700 3.776 7.510
Hmax_105 : 17.800 11.300 3.059 5.140
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.7839 0.2161
DFMC : 0.7785 0.2215
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
519 NF0116430
MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQYSGYVPVSINSTYETRFLFY 80
WFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLLNNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDH 160
VWNDVKSANDVLQFLAIFFSEMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED 240
TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYANCVGDVGPFVDEKSDEFSQK 320
EESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTRVGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQM 400
CNDVVNGNYNRTYDSMIPFYQELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI 480
WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN 560
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
....................................... 560
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0116430 2 -----MK|FL 0.063 .
NF0116430 45 AAPPPQR|IT 0.088 .
NF0116430 76 NSTYETR|FL 0.093 .
NF0116430 89 VESQSAR|PS 0.123 .
NF0116430 125 LLNNDGK|TL 0.075 .
NF0116430 128 NDGKTLR|AN 0.092 .
NF0116430 136 NDYSWNK|RA 0.061 .
NF0116430 137 DYSWNKR|AN 0.220 .
NF0116430 166 HVWNDVK|SA 0.104 .
NF0116430 188 MFPQYVK|NP 0.053 .
NF0116430 216 VLHANQR|NQ 0.083 .
NF0116430 222 RNQFPFK|FN 0.083 .
NF0116430 226 PFKFNLK|GF 0.064 .
NF0116430 238 NGIMDDR|ED 0.079 .
NF0116430 256 QHSLISK|SS 0.087 .
NF0116430 265 YDDGLSK|CK 0.064 .
NF0116430 267 DGLSKCK|GD 0.062 .
NF0116430 272 CKGDFYK|NQ 0.063 .
NF0116430 313 GPFVDEK|SD 0.091 .
NF0116430 320 SDEFSQK|EE 0.075 .
NF0116430 329 SFLETLK|RN 0.060 .
NF0116430 330 FLETLKR|NG 0.148 .
NF0116430 335 KRNGWMK|AL 0.086 .
NF0116430 340 MKALTQR|PS 0.099 .
NF0116430 344 TQRPSFK|NS 0.083 .
NF0116430 360 FALSTTR|VG 0.074 .
NF0116430 371 APCLAYK|PQ 0.066 .
NF0116430 383 FNLNEVK|QA 0.064 .
NF0116430 397 LIPQDHR|WQ 0.070 .
NF0116430 411 VNGNYNR|TY 0.088 .
NF0116430 429 LLSNGIR|GL 0.111 .
NF0116430 455 GIYALMK|VM 0.062 .
NF0116430 463 MNGQIVK|PY 0.064 .
NF0116430 472 QSWMMDK|QV 0.081 .
NF0116430 491 STTMTFK|TI 0.080 .
NF0116430 494 MTFKTIK|GA 0.100 .
NF0116430 504 HMVPMTR|PK 0.091 .
NF0116430 506 VPMTRPK|QA 0.097 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation