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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0117950.fa
Sequence name : NF0117950
Sequence length : 1074
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.054
CoefTot : -2.875
ChDiff : 1
ZoneTo : 97
KR : 10
DE : 1
CleavSite : 50
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.788 1.406 0.232 0.593
MesoH : 0.031 0.466 -0.285 0.288
MuHd_075 : 29.024 22.982 9.333 7.045
MuHd_095 : 35.040 24.446 10.009 9.312
MuHd_100 : 32.061 23.757 8.990 9.200
MuHd_105 : 31.467 22.832 9.185 8.195
Hmax_075 : 14.600 15.400 3.978 3.920
Hmax_095 : 16.012 20.100 2.065 6.960
Hmax_100 : 18.500 20.100 3.398 6.960
Hmax_105 : 14.700 21.233 3.806 7.373
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.1052 0.8948
DFMC : 0.0448 0.9552
This protein is probably imported in chloroplast.
f(Ser) = 0.1856 f(Arg) = 0.0412 CMi = 1.45278
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
1074 NF0117950
MKRFTSISRQPGGLLMGSSNPNVIPKRPFKTVLCGIHQPMMTIHSNSRSNSNSLSSSTHVLHSKFNSHTTLLKTLHPESS 80
NLLLKQTFSTTFHVSNNEGNNDDNDSHRNKTKKPGKSKQEDRHSEKEDKTSEINRRFDDYEASSKKKKDDKTSKKPHEEE 160
TKAPSSDSSTNEDVIDDDAEHEKEIEKLFENEMEQENKEVVHPEQHSSHQTNKSLQPVKPAEQSIASFFATPTPPMVEVV 240
PLYKKPAFPGTIIPIFITDMKFIQSMLESGFHEKLVGLFLVKDPVKRDQLQNITSIKDIEQVGTLAKVTRVVPARGGASV 320
VFAAIRRIKITGSVPEAKRVSAKIEELPTKKVDKNDLSVKAHVMEIFQQIKEFLSRLDPVQREQLNMILEQLDHTDPAEL 400
SDIAAILSSHDPDKLQDVLQTQDIRERLVKSLEILKAEVETKKIQEKIQKNLEEKLNKQQRKLYLTEQLKIIKQELGLEK 480
DAKEELYKKFSSLANEIKKKDVPEIIKTTLDDELNKFSTLDPHSSEYTNVRNYLDWLTCLPWQTFSKENFDLASAAKILD 560
RDHYGLQKVKERILEFIAVGKLKNTLKGKIICLVGPPGVGKTSIGKSIAAALNREFHRFSVGGLSDVSEIKGHRRTYIGS 640
IPGKLINIMKLAKSSNPVIMIDEIDKLGRSHQGDPASALLEVLDPEQNHSFVDHYLDVPYDLSNVLFICTANVLDTIPGP 720
LLDRMEVLRLSGYVLDEKLHITRNYLLPKKVEETGLLSKKTKKPLLTLDDSLIEKLIKEHCREAGVRNLEKHIEMICRKV 800
ALKIAKDTTQKRPAIFHLKETDLEEFVGKPVFTSDRYYLTTPIGVTMGLAWTSMGGSTLYIETVADKMYSEPEITNAPSS 880
TDSTTAMTASVTPSPQPPNGSLKCTGQMGDVMKESTAIAYTYAKNHLFNIDPKNDFFRKTHIHMHIPEGATPKDGPSAGV 960
TMVTSLLSLALNRPVKHNLAMTGELTITGKALTIGGVKEKVIAAKRSGVSEVIMPSGNRRDWDELDKTITEGVKVHFVDY 1040
YSDVFKIAFEYDEAENQAAIEKDRKSGNLMDLSS 1120
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
................................................................................ 800
................................................................................ 880
................................................................................ 960
................................................................................ 1040
.................................. 1120
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0117950 2 -----MK|RF 0.063 .
NF0117950 3 ----MKR|FT 0.302 .
NF0117950 9 RFTSISR|QP 0.092 .
NF0117950 26 NPNVIPK|RP 0.070 .
NF0117950 27 PNVIPKR|PF 0.218 .
NF0117950 30 IPKRPFK|TV 0.292 .
NF0117950 48 TIHSNSR|SN 0.177 .
NF0117950 64 THVLHSK|FN 0.073 .
NF0117950 73 SHTTLLK|TL 0.061 .
NF0117950 85 SSNLLLK|QT 0.074 .
NF0117950 108 DDNDSHR|NK 0.103 .
NF0117950 110 NDSHRNK|TK 0.074 .
NF0117950 112 SHRNKTK|KP 0.088 .
NF0117950 113 HRNKTKK|PG 0.151 .
NF0117950 116 KTKKPGK|SK 0.090 .
NF0117950 118 KKPGKSK|QE 0.064 .
NF0117950 122 KSKQEDR|HS 0.148 .
NF0117950 126 EDRHSEK|ED 0.069 .
NF0117950 129 HSEKEDK|TS 0.068 .
NF0117950 135 KTSEINR|RF 0.150 .
NF0117950 136 TSEINRR|FD 0.185 .
NF0117950 145 DYEASSK|KK 0.056 .
NF0117950 146 YEASSKK|KK 0.115 .
NF0117950 147 EASSKKK|KD 0.117 .
NF0117950 148 ASSKKKK|DD 0.233 .
NF0117950 151 KKKKDDK|TS 0.062 .
NF0117950 154 KDDKTSK|KP 0.067 .
NF0117950 155 DDKTSKK|PH 0.109 .
NF0117950 162 PHEEETK|AP 0.060 .
NF0117950 183 DDAEHEK|EI 0.077 .
NF0117950 187 HEKEIEK|LF 0.064 .
NF0117950 198 EMEQENK|EV 0.074 .
NF0117950 213 SSHQTNK|SL 0.131 .
NF0117950 219 KSLQPVK|PA 0.090 .
NF0117950 244 EVVPLYK|KP 0.052 .
NF0117950 245 VVPLYKK|PA 0.094 .
NF0117950 261 IFITDMK|FI 0.073 .
NF0117950 274 ESGFHEK|LV 0.079 .
NF0117950 282 VGLFLVK|DP 0.054 .
NF0117950 286 LVKDPVK|RD 0.058 .
NF0117950 287 VKDPVKR|DQ 0.221 .
NF0117950 297 QNITSIK|DI 0.108 .
NF0117950 307 QVGTLAK|VT 0.062 .
NF0117950 310 TLAKVTR|VV 0.166 .
NF0117950 315 TRVVPAR|GG 0.129 .
NF0117950 326 VVFAAIR|RI 0.076 .
NF0117950 327 VFAAIRR|IK 0.115 .
NF0117950 329 AAIRRIK|IT 0.175 .
NF0117950 338 GSVPEAK|RV 0.109 .
NF0117950 339 SVPEAKR|VS 0.150 .
NF0117950 343 AKRVSAK|IE 0.070 .
NF0117950 350 IEELPTK|KV 0.083 .
NF0117950 351 EELPTKK|VD 0.067 .
NF0117950 354 PTKKVDK|ND 0.062 .
NF0117950 360 KNDLSVK|AH 0.063 .
NF0117950 371 EIFQQIK|EF 0.056 .
NF0117950 376 IKEFLSR|LD 0.086 .
NF0117950 382 RLDPVQR|EQ 0.073 .
NF0117950 414 SSHDPDK|LQ 0.075 .
NF0117950 425 LQTQDIR|ER 0.062 .
NF0117950 427 TQDIRER|LV 0.102 .
NF0117950 430 IRERLVK|SL 0.245 .
NF0117950 436 KSLEILK|AE 0.051 .
NF0117950 442 KAEVETK|KI 0.068 .
NF0117950 443 AEVETKK|IQ 0.111 .
NF0117950 447 TKKIQEK|IQ 0.066 .
NF0117950 450 IQEKIQK|NL 0.073 .
NF0117950 455 QKNLEEK|LN 0.068 .
NF0117950 458 LEEKLNK|QQ 0.062 .
NF0117950 461 KLNKQQR|KL 0.111 .
NF0117950 462 LNKQQRK|LY 0.096 .
NF0117950 470 YLTEQLK|II 0.064 .
NF0117950 473 EQLKIIK|QE 0.057 .
NF0117950 480 QELGLEK|DA 0.069 .
NF0117950 483 GLEKDAK|EE 0.062 .
NF0117950 488 AKEELYK|KF 0.063 .
NF0117950 489 KEELYKK|FS 0.102 .
NF0117950 498 SLANEIK|KK 0.070 .
NF0117950 499 LANEIKK|KD 0.089 .
NF0117950 500 ANEIKKK|DV 0.256 .
NF0117950 507 DVPEIIK|TT 0.056 .
NF0117950 516 LDDELNK|FS 0.060 .
NF0117950 531 SEYTNVR|NY 0.102 .
NF0117950 547 PWQTFSK|EN 0.070 .
NF0117950 557 DLASAAK|IL 0.067 .
NF0117950 561 AAKILDR|DH 0.099 .
NF0117950 568 DHYGLQK|VK 0.063 .
NF0117950 570 YGLQKVK|ER 0.056 .
NF0117950 572 LQKVKER|IL 0.110 .
NF0117950 581 EFIAVGK|LK 0.058 .
NF0117950 583 IAVGKLK|NT 0.070 .
NF0117950 587 KLKNTLK|GK 0.073 .
NF0117950 589 KNTLKGK|II 0.072 .
NF0117950 601 GPPGVGK|TS 0.063 .
NF0117950 606 GKTSIGK|SI 0.092 .
NF0117950 614 IAAALNR|EF 0.084 .
NF0117950 618 LNREFHR|FS 0.148 .
NF0117950 631 SDVSEIK|GH 0.062 .
NF0117950 634 SEIKGHR|RT 0.075 .
NF0117950 635 EIKGHRR|TY 0.165 .
NF0117950 644 IGSIPGK|LI 0.073 .
NF0117950 650 KLINIMK|LA 0.070 .
NF0117950 653 NIMKLAK|SS 0.092 .
NF0117950 666 MIDEIDK|LG 0.057 .
NF0117950 669 EIDKLGR|SH 0.102 .
NF0117950 724 PGPLLDR|ME 0.062 .
NF0117950 729 DRMEVLR|LS 0.121 .
NF0117950 738 GYVLDEK|LH 0.052 .
NF0117950 743 EKLHITR|NY 0.065 .
NF0117950 749 RNYLLPK|KV 0.083 .
NF0117950 750 NYLLPKK|VE 0.082 .
NF0117950 759 ETGLLSK|KT 0.058 .
NF0117950 760 TGLLSKK|TK 0.085 .
NF0117950 762 LLSKKTK|KP 0.073 .
NF0117950 763 LSKKTKK|PL 0.102 .
NF0117950 775 DDSLIEK|LI 0.061 .
NF0117950 778 LIEKLIK|EH 0.057 .
NF0117950 782 LIKEHCR|EA 0.123 .
NF0117950 787 CREAGVR|NL 0.134 .
NF0117950 791 GVRNLEK|HI 0.082 .
NF0117950 798 HIEMICR|KV 0.104 .
NF0117950 799 IEMICRK|VA 0.089 .
NF0117950 803 CRKVALK|IA 0.066 .
NF0117950 806 VALKIAK|DT 0.094 .
NF0117950 811 AKDTTQK|RP 0.051 .
NF0117950 812 KDTTQKR|PA 0.197 .
NF0117950 819 PAIFHLK|ET 0.071 .
NF0117950 829 LEEFVGK|PV 0.088 .
NF0117950 836 PVFTSDR|YY 0.081 .
NF0117950 867 IETVADK|MY 0.065 .
NF0117950 903 PPNGSLK|CT 0.112 .
NF0117950 913 QMGDVMK|ES 0.076 .
NF0117950 924 IAYTYAK|NH 0.055 .
NF0117950 933 LFNIDPK|ND 0.063 .
NF0117950 938 PKNDFFR|KT 0.149 .
NF0117950 939 KNDFFRK|TH 0.076 .
NF0117950 953 PEGATPK|DG 0.077 .
NF0117950 973 LSLALNR|PV 0.120 .
NF0117950 976 ALNRPVK|HN 0.133 .
NF0117950 990 ELTITGK|AL 0.071 .
NF0117950 998 LTIGGVK|EK 0.053 .
NF0117950 1000 IGGVKEK|VI 0.074 .
NF0117950 1005 EKVIAAK|RS 0.085 .
NF0117950 1006 KVIAAKR|SG 0.177 .
NF0117950 1019 IMPSGNR|RD 0.073 .
NF0117950 1020 MPSGNRR|DW 0.409 .
NF0117950 1027 DWDELDK|TI 0.064 .
NF0117950 1034 TITEGVK|VH 0.054 .
NF0117950 1046 YYSDVFK|IA 0.082 .
NF0117950 1062 NQAAIEK|DR 0.066 .
NF0117950 1064 AAIEKDR|KS 0.105 .
NF0117950 1065 AIEKDRK|SG 0.082 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation