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_ID
Prediction
OTHER
SP
mTP
CS_Position
NF0119540 OTHER 0.999804 0.000101 0.000095
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No Results
  • Fasta :-

    >NF0119540 MHSLNNLLQGAYFTEIDLMEIARNLDRKEAELLQAESGVQQQTRTSHNVSDEGDFSIGVI STSLEVWGLNLIPITHPSIVQSIREKPWEEKAFICNHLEHWFVFRKFGNHWFNLNSTLKE PTYLSPTHISLFIEQLKQEGYSIYVVKGELPPCEAELYSETFDPKSVTSRSRASSSSSRP QQDNTIDFITKMQESILSGTGARQHQQSTVPMPTPNINSDEWKRAVEFARMESMFWEANR HLTQPQAAAQQTSEDDEDDEDEALKEAIERSLEQQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0119540.fa Sequence name : NF0119540 Sequence length : 275 VALUES OF COMPUTED PARAMETERS Coef20 : 3.454 CoefTot : -0.450 ChDiff : -19 ZoneTo : 14 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.265 0.047 0.568 MesoH : -0.702 -0.013 -0.555 0.189 MuHd_075 : 12.383 11.977 4.238 3.150 MuHd_095 : 16.671 18.134 7.109 4.132 MuHd_100 : 17.123 18.236 6.778 4.060 MuHd_105 : 16.185 16.867 6.396 3.682 Hmax_075 : 10.733 11.667 0.465 4.200 Hmax_095 : 5.425 12.900 0.279 4.840 Hmax_100 : 12.800 15.400 2.094 4.920 Hmax_105 : 17.400 18.200 2.812 5.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9379 0.0621 DFMC : 0.9539 0.0461
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 275 NF0119540 MHSLNNLLQGAYFTEIDLMEIARNLDRKEAELLQAESGVQQQTRTSHNVSDEGDFSIGVISTSLEVWGLNLIPITHPSIV 80 QSIREKPWEEKAFICNHLEHWFVFRKFGNHWFNLNSTLKEPTYLSPTHISLFIEQLKQEGYSIYVVKGELPPCEAELYSE 160 TFDPKSVTSRSRASSSSSRPQQDNTIDFITKMQESILSGTGARQHQQSTVPMPTPNINSDEWKRAVEFARMESMFWEANR 240 HLTQPQAAAQQTSEDDEDDEDEALKEAIERSLEQQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0119540 23 DLMEIAR|NL 0.114 . NF0119540 27 IARNLDR|KE 0.079 . NF0119540 28 ARNLDRK|EA 0.121 . NF0119540 44 GVQQQTR|TS 0.103 . NF0119540 84 SIVQSIR|EK 0.105 . NF0119540 86 VQSIREK|PW 0.074 . NF0119540 91 EKPWEEK|AF 0.058 . NF0119540 105 EHWFVFR|KF 0.111 . NF0119540 106 HWFVFRK|FG 0.086 . NF0119540 119 NLNSTLK|EP 0.060 . NF0119540 137 LFIEQLK|QE 0.065 . NF0119540 147 YSIYVVK|GE 0.063 . NF0119540 165 SETFDPK|SV 0.086 . NF0119540 170 PKSVTSR|SR 0.132 . NF0119540 172 SVTSRSR|AS 0.084 . NF0119540 179 ASSSSSR|PQ 0.107 . NF0119540 191 TIDFITK|MQ 0.074 . NF0119540 203 LSGTGAR|QH 0.098 . NF0119540 223 INSDEWK|RA 0.081 . NF0119540 224 NSDEWKR|AV 0.319 . NF0119540 230 RAVEFAR|ME 0.103 . NF0119540 240 MFWEANR|HL 0.100 . NF0119540 265 DEDEALK|EA 0.056 . NF0119540 270 LKEAIER|SL 0.187 . ____________________________^_________________
  • Fasta :-

    >NF0119540 ATGCATTCTCTAAATAATCTCCTTCAGGGAGCCTATTTTACAGAAATTGATTTGATGGAA ATTGCACGTAATTTAGATAGGAAGGAAGCTGAATTATTGCAAGCTGAATCCGGGGTGCAA CAGCAAACAAGGACGAGTCATAACGTGAGTGATGAAGGAGATTTTAGTATTGGAGTTATT TCCACAAGTCTTGAAGTTTGGGGACTGAATTTAATTCCGATCACACATCCAAGCATTGTT CAATCCATCAGAGAAAAACCTTGGGAAGAAAAAGCTTTTATTTGCAATCATCTGGAACAT TGGTTTGTCTTTAGAAAATTTGGAAATCATTGGTTTAATCTAAATTCAACATTGAAAGAA CCAACCTATCTTTCACCTACTCATATTTCTCTTTTTATTGAGCAGTTGAAACAAGAAGGA TATTCAATTTATGTTGTTAAGGGAGAATTACCTCCATGTGAGGCTGAGTTATATTCTGAA ACATTTGATCCCAAATCTGTGACAAGTCGCTCACGTGCTTCATCCTCAAGCAGCCGACCT CAACAAGACAATACGATTGATTTTATTACAAAAATGCAAGAAAGTATTTTGTCTGGCACC GGTGCCCGACAACATCAACAATCCACTGTACCAATGCCAACTCCTAACATAAATAGTGAT GAGTGGAAACGAGCTGTTGAATTTGCAAGAATGGAATCAATGTTTTGGGAGGCCAATCGT CACTTGACACAACCCCAAGCAGCAGCACAACAAACATCGGAAGACGACGAGGATGATGAA GATGAGGCGCTAAAGGAAGCAATCGAAAGAAGCTTAGAACAACAATAA
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  • Fasta :-

    MHSLNNLLQGAYFTEIDLMEIARNLDRKEAELLQAESGVQQQTRTSHNVSDEGDFSIGVI STSLEVWGLNLIPITHPSIVQSIREKPWEEKAFICNHLEHWFVFRKFGNHWFNLNSTLKE PTYLSPTHISLFIEQLKQEGYSIYVVKGELPPCEAELYSETFDPKSVTSRSRASSSSSRP QQDNTIDFITKMQESILSGTGARQHQQSTVPMPTPNINSDEWKRAVEFARMESMFWEANR HLTQPQAAAQQTSEDDEDDEDEALKEAIERSLEQQ

    No Results
    No Results
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ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
NF0119540 T 168 0.563 0.153 NF0119540 T 161 0.557 0.040 NF0119540 S 166 0.536 0.020
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ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
NF0119540 T 168 0.563 0.153 NF0119540 T 161 0.557 0.040 NF0119540 S 166 0.536 0.020
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
NF0119540 174 S RSRASSSSS 0.997 unsp NF0119540 174 S RSRASSSSS 0.997 unsp NF0119540 174 S RSRASSSSS 0.997 unsp NF0119540 175 S SRASSSSSR 0.995 unsp NF0119540 253 S AQQTSEDDE 0.994 unsp NF0119540 50 S SHNVSDEGD 0.995 unsp NF0119540 169 S KSVTSRSRA 0.991 unsp
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India