NF0120610 | monoglyceride lipase-like

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_IDPredictionOTHERSPmTPCS_Position
NF0120610OTHER0.9995830.0003280.000089
No Results

  • Fasta :-

    >NF0120610 MIQLATTTESLNTFKISDYLDVTNNNNTTTNKNDKITNENNRSFKFSFERWFGTNTLNQP STTTQRIYTRHQYYANGIEKLEEIQAVMIVLHGYGEHCTCKTVQKISGIMNMENIVVYSF NCRLFNKCIRVTITEEDSHEKIEDIRMNINFEQALMDIASAIEDVSICFPAFKFPNLKIL LLGYSIGATLGMQFLTTTSLFDKIPDKRLNGLILISPFIYHGLEDEKSQTLEKTSEWTQP SETWSSYFLKKASYWIPNYQMLHFEKEKIKKDFSKDSELLEMLENDPVIRENASFHSVSP SSYHLLPPCTAIFAQQTLEAMKEIEKVLSEKIVSLSRKSNNLRVLFLHGINDALSPVVNS SIKWHQALNQQAEFNNISSQLILYENRKHYFLLDRESEQVFNDMVQFIKSHCLN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0120610.fa Sequence name : NF0120610 Sequence length : 414 VALUES OF COMPUTED PARAMETERS Coef20 : 4.197 CoefTot : 0.108 ChDiff : -7 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.700 1.588 0.233 0.669 MesoH : -0.030 0.714 -0.231 0.344 MuHd_075 : 18.035 13.407 4.682 3.150 MuHd_095 : 10.960 6.871 3.163 2.305 MuHd_100 : 7.754 5.069 2.630 1.448 MuHd_105 : 14.664 4.568 3.642 1.015 Hmax_075 : 9.275 7.875 0.374 3.045 Hmax_095 : 5.250 6.125 -0.334 2.660 Hmax_100 : 6.300 5.100 -0.518 2.490 Hmax_105 : 7.600 7.400 -0.462 3.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8466 0.1534 DFMC : 0.7486 0.2514
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 414 NF0120610 MIQLATTTESLNTFKISDYLDVTNNNNTTTNKNDKITNENNRSFKFSFERWFGTNTLNQPSTTTQRIYTRHQYYANGIEK 80 LEEIQAVMIVLHGYGEHCTCKTVQKISGIMNMENIVVYSFNCRLFNKCIRVTITEEDSHEKIEDIRMNINFEQALMDIAS 160 AIEDVSICFPAFKFPNLKILLLGYSIGATLGMQFLTTTSLFDKIPDKRLNGLILISPFIYHGLEDEKSQTLEKTSEWTQP 240 SETWSSYFLKKASYWIPNYQMLHFEKEKIKKDFSKDSELLEMLENDPVIRENASFHSVSPSSYHLLPPCTAIFAQQTLEA 320 MKEIEKVLSEKIVSLSRKSNNLRVLFLHGINDALSPVVNSSIKWHQALNQQAEFNNISSQLILYENRKHYFLLDRESEQV 400 FNDMVQFIKSHCLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0120610 15 ESLNTFK|IS 0.060 . NF0120610 32 NNTTTNK|ND 0.055 . NF0120610 35 TTNKNDK|IT 0.076 . NF0120610 42 ITNENNR|SF 0.129 . NF0120610 45 ENNRSFK|FS 0.206 . NF0120610 50 FKFSFER|WF 0.106 . NF0120610 66 PSTTTQR|IY 0.079 . NF0120610 70 TQRIYTR|HQ 0.102 . NF0120610 80 YANGIEK|LE 0.066 . NF0120610 101 GEHCTCK|TV 0.086 . NF0120610 105 TCKTVQK|IS 0.077 . NF0120610 123 VYSFNCR|LF 0.093 . NF0120610 127 NCRLFNK|CI 0.070 . NF0120610 130 LFNKCIR|VT 0.112 . NF0120610 141 EEDSHEK|IE 0.058 . NF0120610 146 EKIEDIR|MN 0.089 . NF0120610 173 ICFPAFK|FP 0.060 . NF0120610 178 FKFPNLK|IL 0.057 . NF0120610 203 TTSLFDK|IP 0.076 . NF0120610 207 FDKIPDK|RL 0.060 . NF0120610 208 DKIPDKR|LN 0.165 . NF0120610 227 HGLEDEK|SQ 0.065 . NF0120610 233 KSQTLEK|TS 0.069 . NF0120610 250 WSSYFLK|KA 0.099 . NF0120610 251 SSYFLKK|AS 0.151 . NF0120610 266 QMLHFEK|EK 0.065 . NF0120610 268 LHFEKEK|IK 0.062 . NF0120610 270 FEKEKIK|KD 0.063 . NF0120610 271 EKEKIKK|DF 0.125 . NF0120610 275 IKKDFSK|DS 0.093 . NF0120610 290 ENDPVIR|EN 0.073 . NF0120610 322 QTLEAMK|EI 0.072 . NF0120610 326 AMKEIEK|VL 0.061 . NF0120610 331 EKVLSEK|IV 0.082 . NF0120610 337 KIVSLSR|KS 0.067 . NF0120610 338 IVSLSRK|SN 0.118 . NF0120610 343 RKSNNLR|VL 0.093 . NF0120610 363 VVNSSIK|WH 0.065 . NF0120610 387 LILYENR|KH 0.069 . NF0120610 388 ILYENRK|HY 0.073 . NF0120610 395 HYFLLDR|ES 0.107 . NF0120610 409 DMVQFIK|SH 0.069 . ____________________________^_________________

  • Fasta :-

    >NF0120610 ATGATACAACTTGCAACAACAACCGAATCTTTGAATACTTTCAAGATTTCCGATTATTTG GACGTTACAAATAATAACAATACTACTACAAATAAGAACGACAAGATAACAAATGAGAAC AATAGATCTTTTAAATTTTCTTTCGAAAGATGGTTCGGAACGAATACTTTAAATCAACCC TCTACGACGACTCAACGAATTTATACCAGACATCAATATTATGCAAATGGAATTGAAAAG TTGGAGGAAATTCAAGCAGTGATGATTGTTCTGCATGGCTATGGAGAACATTGTACTTGC AAAACTGTGCAGAAAATTTCTGGAATTATGAATATGGAAAATATTGTGGTTTATTCGTTC AATTGTAGGCTCTTTAATAAGTGTATTCGTGTGACCATCACCGAAGAGGACAGTCATGAA AAGATTGAGGATATTCGAATGAATATTAATTTCGAACAAGCTTTAATGGATATTGCTTCA GCCATTGAAGATGTCTCTATTTGTTTTCCTGCTTTTAAATTTCCAAACTTGAAAATTCTT CTATTGGGTTACAGTATTGGAGCCACTTTGGGGATGCAATTTCTCACGACGACTTCACTA TTTGACAAAATTCCAGACAAGAGGTTGAATGGATTGATTTTGATCTCACCATTTATCTAT CATGGTTTGGAAGATGAGAAATCTCAAACTCTTGAAAAAACTTCAGAATGGACTCAACCT TCAGAAACATGGTCTTCTTATTTCTTGAAAAAAGCAAGTTATTGGATTCCCAATTATCAA ATGCTTCATTTTGAGAAGGAAAAGATTAAGAAGGACTTTTCTAAGGATTCTGAGTTATTA GAAATGCTTGAAAACGATCCAGTGATCCGAGAAAATGCATCCTTCCACTCAGTATCGCCT TCATCATACCATTTACTTCCACCATGCACTGCAATTTTTGCTCAACAAACATTAGAGGCC ATGAAAGAAATTGAGAAAGTCCTTTCAGAGAAGATTGTGTCACTTTCCAGAAAGAGTAAT AATTTGAGAGTTCTCTTTCTGCATGGAATCAATGATGCATTATCTCCTGTAGTGAATAGC AGCATCAAGTGGCATCAAGCATTGAATCAACAAGCAGAATTCAACAACATTTCTTCTCAA TTGATTCTATACGAGAATCGAAAGCATTACTTTTTGCTGGACCGAGAGAGTGAGCAAGTG TTTAATGACATGGTTCAATTCATCAAATCTCATTGTTTGAACTAA
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  • Fasta :-

    MIQLATTTESLNTFKISDYLDVTNNNNTTTNKNDKITNENNRSFKFSFERWFGTNTLNQP STTTQRIYTRHQYYANGIEKLEEIQAVMIVLHGYGEHCTCKTVQKISGIMNMENIVVYSF NCRLFNKCIRVTITEEDSHEKIEDIRMNINFEQALMDIASAIEDVSICFPAFKFPNLKIL LLGYSIGATLGMQFLTTTSLFDKIPDKRLNGLILISPFIYHGLEDEKSQTLEKTSEWTQP SETWSSYFLKKASYWIPNYQMLHFEKEKIKKDFSKDSELLEMLENDPVIRENASFHSVSP SSYHLLPPCTAIFAQQTLEAMKEIEKVLSEKIVSLSRKSNNLRVLFLHGINDALSPVVNS SIKWHQALNQQAEFNNISSQLILYENRKHYFLLDRESEQVFNDMVQFIKSHCLN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF012061047 SSFKFSFERW0.991unspNF0120610138 STEEDSHEKI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India