NF0121710 | peptidase m50

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_IDPredictionOTHERSPmTPCS_Position
NF0121710OTHER0.9999910.0000020.000006
No Results

  • Fasta :-

    >NF0121710 MKFRNYNKKIMEQRNALHHQNDSNNNNNNHPNHERDLEKHHNRIESKKETDNSNPSIDLE SQQHLTQQPFITNDDEQSNLDFYESSFSIFTPLKEEEAPNSHSNIHSSTNTYSSKRTIQS FISSLFSHSITWLIIVSILTVLLWQLPSDVGNYIIYPFTIFGTFWHELGHATTALLCGNT LEFIKIESNGSGLTVYQDVTQNTFCNALISVNGPLGPTFFGCLIICLSVAFVKHELFSRV LLSTIATIVLIVTALFIRKSIFGMVFLPIVSLVLYGIALKAPKVLVTFSLQFIGVQMAIS MYENFMYLFSKMNGKSDTGSVEVLFRGVIPYWLVAILIIVINVTCMTLSLWFVIRHSLRV RQSSSSDEATVVVNQQR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0121710.fa Sequence name : NF0121710 Sequence length : 377 VALUES OF COMPUTED PARAMETERS Coef20 : 3.540 CoefTot : -0.629 ChDiff : -2 ZoneTo : 11 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.347 2.653 0.556 0.889 MesoH : 1.162 1.760 0.164 0.580 MuHd_075 : 33.892 16.416 8.620 7.526 MuHd_095 : 11.676 7.004 3.115 2.854 MuHd_100 : 19.102 13.732 6.545 4.680 MuHd_105 : 26.118 18.976 9.648 6.013 Hmax_075 : -0.467 -0.000 -3.639 1.610 Hmax_095 : -13.475 -4.638 -6.795 -0.840 Hmax_100 : -7.100 1.800 -4.769 0.660 Hmax_105 : 7.467 9.450 0.103 4.352 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8546 0.1454 DFMC : 0.8322 0.1678
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 377 NF0121710 MKFRNYNKKIMEQRNALHHQNDSNNNNNNHPNHERDLEKHHNRIESKKETDNSNPSIDLESQQHLTQQPFITNDDEQSNL 80 DFYESSFSIFTPLKEEEAPNSHSNIHSSTNTYSSKRTIQSFISSLFSHSITWLIIVSILTVLLWQLPSDVGNYIIYPFTI 160 FGTFWHELGHATTALLCGNTLEFIKIESNGSGLTVYQDVTQNTFCNALISVNGPLGPTFFGCLIICLSVAFVKHELFSRV 240 LLSTIATIVLIVTALFIRKSIFGMVFLPIVSLVLYGIALKAPKVLVTFSLQFIGVQMAISMYENFMYLFSKMNGKSDTGS 320 VEVLFRGVIPYWLVAILIIVINVTCMTLSLWFVIRHSLRVRQSSSSDEATVVVNQQR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0121710 2 -----MK|FR 0.065 . NF0121710 4 ---MKFR|NY 0.120 . NF0121710 8 KFRNYNK|KI 0.073 . NF0121710 9 FRNYNKK|IM 0.136 . NF0121710 14 KKIMEQR|NA 0.115 . NF0121710 35 NHPNHER|DL 0.133 . NF0121710 39 HERDLEK|HH 0.072 . NF0121710 43 LEKHHNR|IE 0.146 . NF0121710 47 HNRIESK|KE 0.063 . NF0121710 48 NRIESKK|ET 0.171 . NF0121710 94 SIFTPLK|EE 0.060 . NF0121710 115 TNTYSSK|RT 0.074 . NF0121710 116 NTYSSKR|TI 0.154 . NF0121710 185 NTLEFIK|IE 0.057 . NF0121710 233 LSVAFVK|HE 0.059 . NF0121710 239 KHELFSR|VL 0.074 . NF0121710 258 VTALFIR|KS 0.081 . NF0121710 259 TALFIRK|SI 0.121 . NF0121710 280 LYGIALK|AP 0.054 . NF0121710 283 IALKAPK|VL 0.057 . NF0121710 311 FMYLFSK|MN 0.081 . NF0121710 315 FSKMNGK|SD 0.085 . NF0121710 326 SVEVLFR|GV 0.135 . NF0121710 355 SLWFVIR|HS 0.107 . NF0121710 359 VIRHSLR|VR 0.074 . NF0121710 361 RHSLRVR|QS 0.113 . NF0121710 377 VVVNQQR|-- 0.093 . ____________________________^_________________

  • Fasta :-

    >NF0121710 ATGAAATTCAGAAATTACAATAAAAAAATAATGGAACAAAGGAATGCCCTTCATCATCAG AACGATTCGAACAACAACAACAACAACCATCCGAATCATGAAAGAGATTTGGAGAAGCAT CATAATCGTATAGAATCAAAAAAGGAAACTGATAATAGTAATCCCTCTATTGATTTGGAA AGCCAGCAACATCTTACTCAACAACCATTCATCACCAATGATGATGAGCAAAGCAATTTA GACTTTTACGAAAGCTCATTCTCAATATTTACTCCATTGAAAGAGGAAGAGGCTCCCAAC AGTCATTCTAACATTCATTCATCAACAAATACATATTCCTCAAAACGAACCATTCAATCT TTTATATCCTCACTTTTCAGTCATTCCATTACATGGCTTATTATTGTTTCAATTTTAACT GTTTTACTCTGGCAATTGCCTTCTGATGTTGGAAATTATATTATTTATCCATTTACAATA TTTGGAACGTTTTGGCATGAATTGGGACATGCCACAACGGCCCTACTTTGTGGAAATACT CTCGAGTTTATCAAAATTGAAAGCAATGGAAGTGGATTAACAGTGTATCAAGATGTGACT CAAAACACTTTTTGCAATGCCTTAATAAGTGTGAATGGACCATTGGGACCCACGTTTTTT GGATGTCTCATTATTTGTTTGAGTGTTGCATTTGTGAAACATGAATTATTTTCGAGAGTG TTGTTGTCCACCATTGCCACCATTGTGTTGATAGTGACCGCACTGTTCATTCGAAAATCA ATATTTGGAATGGTTTTTCTTCCAATAGTGTCTCTTGTGTTGTATGGAATAGCACTCAAA GCACCCAAAGTTTTGGTGACCTTCTCTTTGCAATTCATTGGTGTACAAATGGCCATTTCC ATGTATGAAAATTTCATGTACTTGTTCTCCAAGATGAATGGAAAATCTGATACTGGATCT GTGGAAGTTCTCTTTCGTGGAGTGATCCCTTATTGGCTGGTAGCGATTTTAATTATTGTG ATTAATGTGACATGCATGACATTGAGCTTGTGGTTTGTCATTCGACATTCTTTGAGAGTT CGTCAATCATCATCCTCTGATGAGGCAACAGTAGTGGTGAACCAACAACGGTGA
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  • Fasta :-

    MKFRNYNKKIMEQRNALHHQNDSNNNNNNHPNHERDLEKHHNRIESKKETDNSNPSIDLE SQQHLTQQPFITNDDEQSNLDFYESSFSIFTPLKEEEAPNSHSNIHSSTNTYSSKRTIQS FISSLFSHSITWLIIVSILTVLLWQLPSDVGNYIIYPFTIFGTFWHELGHATTALLCGNT LEFIKIESNGSGLTVYQDVTQNTFCNALISVNGPLGPTFFGCLIICLSVAFVKHELFSRV LLSTIATIVLIVTALFIRKSIFGMVFLPIVSLVLYGIALKAPKVLVTFSLQFIGVQMAIS MYENFMYLFSKMNGKSDTGSVEVLFRGVIPYWLVAILIIVINVTCMTLSLWFVIRHSLRV RQSSSSDEATVVVNQQR

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0121710366 SQSSSSDEAT0.997unspNF0121710366 SQSSSSDEAT0.997unspNF0121710366 SQSSSSDEAT0.997unspNF012171046 SNRIESKKET0.998unspNF0121710364 SVRQSSSSDE0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India