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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0122010.fa
Sequence name : NF0122010
Sequence length : 152
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.176
CoefTot : -1.721
ChDiff : 14
ZoneTo : 75
KR : 12
DE : 1
CleavSite : 64
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.253 2.288 0.120 0.736
MesoH : -0.536 0.360 -0.388 0.181
MuHd_075 : 56.044 35.590 16.876 11.964
MuHd_095 : 31.820 23.361 8.270 7.935
MuHd_100 : 25.097 22.086 8.648 6.198
MuHd_105 : 27.895 21.648 9.477 6.379
Hmax_075 : 19.600 21.467 6.845 5.740
Hmax_095 : 13.912 10.300 4.314 5.075
Hmax_100 : 14.800 15.300 3.005 4.140
Hmax_105 : 14.800 18.400 3.005 5.460
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0749 0.9251
DFMC : 0.0611 0.9389
This protein is probably imported in chloroplast.
f(Ser) = 0.1467 f(Arg) = 0.0533 CMi = 1.01382
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
152 NF0122010
MQKLKSQKASTLLKQASNVLLLSSTTTNGMSSGISRRIGTIPCSGMMKEVCVRRIFGTSCFKQQKGQYGNKTSLMDPNSE 80
IYNLSSSLSASIRLLNQLATQQRAQYHTTNGVFKKKVSVIPSEILNNNILNVVMIVIILIFFNDKMTFRVGY 160
................................................................................ 80
........................................................................ 160
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0122010 3 ----MQK|LK 0.069 .
NF0122010 5 --MQKLK|SQ 0.079 .
NF0122010 8 QKLKSQK|AS 0.061 .
NF0122010 14 KASTLLK|QA 0.090 .
NF0122010 36 MSSGISR|RI 0.167 .
NF0122010 37 SSGISRR|IG 0.126 .
NF0122010 48 PCSGMMK|EV 0.079 .
NF0122010 53 MKEVCVR|RI 0.077 .
NF0122010 54 KEVCVRR|IF 0.184 .
NF0122010 62 FGTSCFK|QQ 0.054 .
NF0122010 65 SCFKQQK|GQ 0.069 .
NF0122010 71 KGQYGNK|TS 0.057 .
NF0122010 93 SLSASIR|LL 0.121 .
NF0122010 103 QLATQQR|AQ 0.098 .
NF0122010 114 TTNGVFK|KK 0.077 .
NF0122010 115 TNGVFKK|KV 0.266 .
NF0122010 116 NGVFKKK|VS 0.076 .
NF0122010 145 LIFFNDK|MT 0.068 .
NF0122010 149 NDKMTFR|VG 0.079 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation