NF0123820 | hydrolase

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_IDPredictionOTHERSPmTPCS_Position
NF0123820OTHER0.6844740.2604120.055113
No Results

  • Fasta :-

    >NF0123820 MFFSNIYLNSLTFLPLVLIGIHYPFKKLLSFLAFYPPPTPKNQFSTFQKLVLRDSQSSKR TIPFYFLKAHDSKVKTTILLSHGNGTNIVEMVGCVFSMSSLE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0123820.fa Sequence name : NF0123820 Sequence length : 102 VALUES OF COMPUTED PARAMETERS Coef20 : 4.299 CoefTot : -3.494 ChDiff : 6 ZoneTo : 99 KR : 10 DE : 3 CleavSite : 70 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.647 0.137 0.674 MesoH : -0.419 0.173 -0.435 0.183 MuHd_075 : 35.745 19.706 9.319 6.812 MuHd_095 : 33.612 23.761 8.905 8.866 MuHd_100 : 35.851 21.248 9.660 8.837 MuHd_105 : 34.652 19.164 9.161 8.065 Hmax_075 : 9.900 12.338 1.640 3.720 Hmax_095 : 5.250 25.813 0.135 3.168 Hmax_100 : 4.800 10.300 0.237 3.670 Hmax_105 : 6.800 8.500 -0.343 3.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7188 0.2812 DFMC : 0.6779 0.3221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 102 NF0123820 MFFSNIYLNSLTFLPLVLIGIHYPFKKLLSFLAFYPPPTPKNQFSTFQKLVLRDSQSSKRTIPFYFLKAHDSKVKTTILL 80 SHGNGTNIVEMVGCVFSMSSLE 160 ................................................................................ 80 ...................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0123820 26 GIHYPFK|KL 0.063 . NF0123820 27 IHYPFKK|LL 0.099 . NF0123820 41 YPPPTPK|NQ 0.060 . NF0123820 49 QFSTFQK|LV 0.071 . NF0123820 53 FQKLVLR|DS 0.096 . NF0123820 59 RDSQSSK|RT 0.072 . NF0123820 60 DSQSSKR|TI 0.144 . NF0123820 68 IPFYFLK|AH 0.073 . NF0123820 73 LKAHDSK|VK 0.074 . NF0123820 75 AHDSKVK|TT 0.060 . ____________________________^_________________

  • Fasta :-

    >NF0123820 ATGTTCTTTTCAAATATCTATTTAAACTCACTCACTTTTTTGCCACTTGTGTTGATCGGA ATTCATTATCCATTCAAAAAGCTGTTGAGTTTTCTTGCCTTTTATCCACCACCCACTCCA AAGAATCAATTTTCTACTTTTCAAAAACTGGTGTTGCGTGATTCTCAGAGTTCAAAAAGA ACCATTCCGTTTTATTTCTTAAAGGCTCATGATTCAAAGGTAAAAACGACCATCTTGTTA TCGCATGGAAATGGAACGAATATTGTAGAGATGGTAGGTTGTGTGTTTTCTATGAGTTCA TTGGAATGA
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  • Fasta :-

    MFFSNIYLNSLTFLPLVLIGIHYPFKKLLSFLAFYPPPTPKNQFSTFQKLVLRDSQSSKR TIPFYFLKAHDSKVKTTILLSHGNGTNIVEMVGCVFSMSSLE

    No Results
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IDSitePeptideScoreMethod
NF012382058 SDSQSSKRTI0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India