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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0125430.fa
Sequence name : NF0125430
Sequence length : 600
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.915
CoefTot : 0.783
ChDiff : 0
ZoneTo : 21
KR : 2
DE : 0
CleavSite : 16
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.794 1.059 0.138 0.458
MesoH : -0.625 0.289 -0.378 0.154
MuHd_075 : 27.113 21.593 7.257 6.805
MuHd_095 : 24.370 12.368 5.349 6.245
MuHd_100 : 21.363 13.572 4.126 6.124
MuHd_105 : 16.404 13.903 2.826 5.526
Hmax_075 : 17.675 20.300 3.448 6.137
Hmax_095 : 15.050 9.800 1.275 3.185
Hmax_100 : 16.600 12.000 1.530 4.360
Hmax_105 : 11.700 10.100 -0.007 3.460
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.1216 0.8784
DFMC : 0.1227 0.8773
This protein is probably imported in chloroplast.
f(Ser) = 0.2857 f(Arg) = 0.0952 CMi = 1.40515
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
600 NF0125430
MMSSMRLISSAVMRNPSFYSLDERYPSSEDEYYDDDEEEEEIEYESPRITSSLFAAKTGTDFLLGPHPLHLNSLSAMPEP 80
TMEVNSNLVNKMMLLDASRMSSSKKPYYKVVYDCFGLGFEHEYFDEEAMSRFLETDIIPISVSTPSNRQNLPKASIAPKE 160
DTLIFESRFESGNLRRAIQIFDYEYDLILKFDVETSGHTQWFYFSVRNAKKGKKYKFNIVNYLKPGSLFNQGMMPLIYSV 240
HDANTKGKGWTRGGSDICYYRNNIRRKTGNFYTLTFTVEFENDNDTYFFAYSYPYTYTNLQNYLNNLEKDKIRSQFVRRR 320
ILCQDVAGNACDVLTITSFACDPTALKRRKGIVLTARVHPGESNSSWMIKGVIDFLTGSSIESKVLRENFIFKIVPMLNP 400
DGVINGNYRCCLTGSDLNRRWHAPNEKTHPTIYHTKKMILEFMKEREIALFCDFHGHSRKKNIFMYGCTDSKTGVERLTP 480
KVFPRLLWKISPHFSFNDCQFGKQKGKDTTARVILHKSGIKNCFTLEASFCGPDNGIHNGKHFTCKHFEQMGHYFCQGIL 560
EFCNPERTQVTLILKELDLLFPEKSEEPIYSKESYSSSED 640
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
........................................ 640
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0125430 6 -MMSSMR|LI 0.102 .
NF0125430 14 ISSAVMR|NP 0.111 .
NF0125430 24 FYSLDER|YP 0.092 .
NF0125430 48 IEYESPR|IT 0.108 .
NF0125430 57 SSLFAAK|TG 0.066 .
NF0125430 91 NSNLVNK|MM 0.062 .
NF0125430 99 MLLDASR|MS 0.084 .
NF0125430 104 SRMSSSK|KP 0.065 .
NF0125430 105 RMSSSKK|PY 0.158 .
NF0125430 109 SKKPYYK|VV 0.089 .
NF0125430 131 DEEAMSR|FL 0.091 .
NF0125430 148 VSTPSNR|QN 0.083 .
NF0125430 153 NRQNLPK|AS 0.080 .
NF0125430 159 KASIAPK|ED 0.072 .
NF0125430 168 TLIFESR|FE 0.139 .
NF0125430 175 FESGNLR|RA 0.120 .
NF0125430 176 ESGNLRR|AI 0.132 .
NF0125430 190 EYDLILK|FD 0.051 .
NF0125430 207 WFYFSVR|NA 0.106 .
NF0125430 210 FSVRNAK|KG 0.115 .
NF0125430 211 SVRNAKK|GK 0.119 .
NF0125430 213 RNAKKGK|KY 0.072 .
NF0125430 214 NAKKGKK|YK 0.107 .
NF0125430 216 KKGKKYK|FN 0.081 .
NF0125430 224 NIVNYLK|PG 0.058 .
NF0125430 246 VHDANTK|GK 0.068 .
NF0125430 248 DANTKGK|GW 0.099 .
NF0125430 252 KGKGWTR|GG 0.097 .
NF0125430 261 SDICYYR|NN 0.078 .
NF0125430 265 YYRNNIR|RK 0.078 .
NF0125430 266 YRNNIRR|KT 0.211 .
NF0125430 267 RNNIRRK|TG 0.095 .
NF0125430 309 YLNNLEK|DK 0.076 .
NF0125430 311 NNLEKDK|IR 0.062 .
NF0125430 313 LEKDKIR|SQ 0.124 .
NF0125430 318 IRSQFVR|RR 0.107 .
NF0125430 319 RSQFVRR|RI 0.150 .
NF0125430 320 SQFVRRR|IL 0.166 .
NF0125430 347 CDPTALK|RR 0.052 .
NF0125430 348 DPTALKR|RK 0.190 .
NF0125430 349 PTALKRR|KG 0.116 .
NF0125430 350 TALKRRK|GI 0.084 .
NF0125430 357 GIVLTAR|VH 0.077 .
NF0125430 370 NSSWMIK|GV 0.148 .
NF0125430 384 GSSIESK|VL 0.070 .
NF0125430 387 IESKVLR|EN 0.104 .
NF0125430 393 RENFIFK|IV 0.080 .
NF0125430 409 VINGNYR|CC 0.083 .
NF0125430 419 TGSDLNR|RW 0.101 .
NF0125430 420 GSDLNRR|WH 0.147 .
NF0125430 427 WHAPNEK|TH 0.063 .
NF0125430 436 PTIYHTK|KM 0.063 .
NF0125430 437 TIYHTKK|MI 0.134 .
NF0125430 444 MILEFMK|ER 0.068 .
NF0125430 446 LEFMKER|EI 0.079 .
NF0125430 459 DFHGHSR|KK 0.082 .
NF0125430 460 FHGHSRK|KN 0.082 .
NF0125430 461 HGHSRKK|NI 0.141 .
NF0125430 472 YGCTDSK|TG 0.052 .
NF0125430 477 SKTGVER|LT 0.105 .
NF0125430 481 VERLTPK|VF 0.060 .
NF0125430 485 TPKVFPR|LL 0.154 .
NF0125430 489 FPRLLWK|IS 0.060 .
NF0125430 503 NDCQFGK|QK 0.074 .
NF0125430 505 CQFGKQK|GK 0.070 .
NF0125430 507 FGKQKGK|DT 0.077 .
NF0125430 512 GKDTTAR|VI 0.093 .
NF0125430 517 ARVILHK|SG 0.088 .
NF0125430 521 LHKSGIK|NC 0.061 .
NF0125430 541 NGIHNGK|HF 0.066 .
NF0125430 546 GKHFTCK|HF 0.116 .
NF0125430 567 EFCNPER|TQ 0.071 .
NF0125430 575 QVTLILK|EL 0.055 .
NF0125430 584 DLLFPEK|SE 0.077 .
NF0125430 592 EEPIYSK|ES 0.055 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation