NF0125430 | zinc carboxypeptidase family protein

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004181 GO:0008270
Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0125430	OTHER	0.945297	0.000830	0.053873

No Results

Fasta :-
>NF0125430 MMSSMRLISSAVMRNPSFYSLDERYPSSEDEYYDDDEEEEEIEYESPRITSSLFAAKTGT DFLLGPHPLHLNSLSAMPEPTMEVNSNLVNKMMLLDASRMSSSKKPYYKVVYDCFGLGFE HEYFDEEAMSRFLETDIIPISVSTPSNRQNLPKASIAPKEDTLIFESRFESGNLRRAIQI FDYEYDLILKFDVETSGHTQWFYFSVRNAKKGKKYKFNIVNYLKPGSLFNQGMMPLIYSV HDANTKGKGWTRGGSDICYYRNNIRRKTGNFYTLTFTVEFENDNDTYFFAYSYPYTYTNL QNYLNNLEKDKIRSQFVRRRILCQDVAGNACDVLTITSFACDPTALKRRKGIVLTARVHP GESNSSWMIKGVIDFLTGSSIESKVLRENFIFKIVPMLNPDGVINGNYRCCLTGSDLNRR WHAPNEKTHPTIYHTKKMILEFMKEREIALFCDFHGHSRKKNIFMYGCTDSKTGVERLTP KVFPRLLWKISPHFSFNDCQFGKQKGKDTTARVILHKSGIKNCFTLEASFCGPDNGIHNG KHFTCKHFEQMGHYFCQGILEFCNPERTQVTLILKELDLLFPEKSEEPIYSKESYSSSED
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0125430.fa Sequence name : NF0125430 Sequence length : 600 VALUES OF COMPUTED PARAMETERS Coef20 : 4.915 CoefTot : 0.783 ChDiff : 0 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.794 1.059 0.138 0.458 MesoH : -0.625 0.289 -0.378 0.154 MuHd_075 : 27.113 21.593 7.257 6.805 MuHd_095 : 24.370 12.368 5.349 6.245 MuHd_100 : 21.363 13.572 4.126 6.124 MuHd_105 : 16.404 13.903 2.826 5.526 Hmax_075 : 17.675 20.300 3.448 6.137 Hmax_095 : 15.050 9.800 1.275 3.185 Hmax_100 : 16.600 12.000 1.530 4.360 Hmax_105 : 11.700 10.100 -0.007 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1216 0.8784 DFMC : 0.1227 0.8773 This protein is probably imported in chloroplast. f(Ser) = 0.2857 f(Arg) = 0.0952 CMi = 1.40515 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 600 NF0125430 MMSSMRLISSAVMRNPSFYSLDERYPSSEDEYYDDDEEEEEIEYESPRITSSLFAAKTGTDFLLGPHPLHLNSLSAMPEP 80 TMEVNSNLVNKMMLLDASRMSSSKKPYYKVVYDCFGLGFEHEYFDEEAMSRFLETDIIPISVSTPSNRQNLPKASIAPKE 160 DTLIFESRFESGNLRRAIQIFDYEYDLILKFDVETSGHTQWFYFSVRNAKKGKKYKFNIVNYLKPGSLFNQGMMPLIYSV 240 HDANTKGKGWTRGGSDICYYRNNIRRKTGNFYTLTFTVEFENDNDTYFFAYSYPYTYTNLQNYLNNLEKDKIRSQFVRRR 320 ILCQDVAGNACDVLTITSFACDPTALKRRKGIVLTARVHPGESNSSWMIKGVIDFLTGSSIESKVLRENFIFKIVPMLNP 400 DGVINGNYRCCLTGSDLNRRWHAPNEKTHPTIYHTKKMILEFMKEREIALFCDFHGHSRKKNIFMYGCTDSKTGVERLTP 480 KVFPRLLWKISPHFSFNDCQFGKQKGKDTTARVILHKSGIKNCFTLEASFCGPDNGIHNGKHFTCKHFEQMGHYFCQGIL 560 EFCNPERTQVTLILKELDLLFPEKSEEPIYSKESYSSSED 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0125430 6 -MMSSMR|LI 0.102 . NF0125430 14 ISSAVMR|NP 0.111 . NF0125430 24 FYSLDER|YP 0.092 . NF0125430 48 IEYESPR|IT 0.108 . NF0125430 57 SSLFAAK|TG 0.066 . NF0125430 91 NSNLVNK|MM 0.062 . NF0125430 99 MLLDASR|MS 0.084 . NF0125430 104 SRMSSSK|KP 0.065 . NF0125430 105 RMSSSKK|PY 0.158 . NF0125430 109 SKKPYYK|VV 0.089 . NF0125430 131 DEEAMSR|FL 0.091 . NF0125430 148 VSTPSNR|QN 0.083 . NF0125430 153 NRQNLPK|AS 0.080 . NF0125430 159 KASIAPK|ED 0.072 . NF0125430 168 TLIFESR|FE 0.139 . NF0125430 175 FESGNLR|RA 0.120 . NF0125430 176 ESGNLRR|AI 0.132 . NF0125430 190 EYDLILK|FD 0.051 . NF0125430 207 WFYFSVR|NA 0.106 . NF0125430 210 FSVRNAK|KG 0.115 . NF0125430 211 SVRNAKK|GK 0.119 . NF0125430 213 RNAKKGK|KY 0.072 . NF0125430 214 NAKKGKK|YK 0.107 . NF0125430 216 KKGKKYK|FN 0.081 . NF0125430 224 NIVNYLK|PG 0.058 . NF0125430 246 VHDANTK|GK 0.068 . NF0125430 248 DANTKGK|GW 0.099 . NF0125430 252 KGKGWTR|GG 0.097 . NF0125430 261 SDICYYR|NN 0.078 . NF0125430 265 YYRNNIR|RK 0.078 . NF0125430 266 YRNNIRR|KT 0.211 . NF0125430 267 RNNIRRK|TG 0.095 . NF0125430 309 YLNNLEK|DK 0.076 . NF0125430 311 NNLEKDK|IR 0.062 . NF0125430 313 LEKDKIR|SQ 0.124 . NF0125430 318 IRSQFVR|RR 0.107 . NF0125430 319 RSQFVRR|RI 0.150 . NF0125430 320 SQFVRRR|IL 0.166 . NF0125430 347 CDPTALK|RR 0.052 . NF0125430 348 DPTALKR|RK 0.190 . NF0125430 349 PTALKRR|KG 0.116 . NF0125430 350 TALKRRK|GI 0.084 . NF0125430 357 GIVLTAR|VH 0.077 . NF0125430 370 NSSWMIK|GV 0.148 . NF0125430 384 GSSIESK|VL 0.070 . NF0125430 387 IESKVLR|EN 0.104 . NF0125430 393 RENFIFK|IV 0.080 . NF0125430 409 VINGNYR|CC 0.083 . NF0125430 419 TGSDLNR|RW 0.101 . NF0125430 420 GSDLNRR|WH 0.147 . NF0125430 427 WHAPNEK|TH 0.063 . NF0125430 436 PTIYHTK|KM 0.063 . NF0125430 437 TIYHTKK|MI 0.134 . NF0125430 444 MILEFMK|ER 0.068 . NF0125430 446 LEFMKER|EI 0.079 . NF0125430 459 DFHGHSR|KK 0.082 . NF0125430 460 FHGHSRK|KN 0.082 . NF0125430 461 HGHSRKK|NI 0.141 . NF0125430 472 YGCTDSK|TG 0.052 . NF0125430 477 SKTGVER|LT 0.105 . NF0125430 481 VERLTPK|VF 0.060 . NF0125430 485 TPKVFPR|LL 0.154 . NF0125430 489 FPRLLWK|IS 0.060 . NF0125430 503 NDCQFGK|QK 0.074 . NF0125430 505 CQFGKQK|GK 0.070 . NF0125430 507 FGKQKGK|DT 0.077 . NF0125430 512 GKDTTAR|VI 0.093 . NF0125430 517 ARVILHK|SG 0.088 . NF0125430 521 LHKSGIK|NC 0.061 . NF0125430 541 NGIHNGK|HF 0.066 . NF0125430 546 GKHFTCK|HF 0.116 . NF0125430 567 EFCNPER|TQ 0.071 . NF0125430 575 QVTLILK|EL 0.055 . NF0125430 584 DLLFPEK|SE 0.077 . NF0125430 592 EEPIYSK|ES 0.055 . ____________________________^_________________

Fasta :-
>NF0125430 ATGATGAGCTCAATGCGGTTGATATCATCAGCCGTGATGAGAAATCCATCATTTTACTCT TTGGATGAGAGGTATCCGAGTAGTGAAGACGAGTATTATGATGATGATGAAGAAGAGGAA GAGATTGAATATGAATCTCCGAGAATTACGTCTTCATTATTTGCTGCCAAAACTGGAACT GATTTTTTGTTGGGACCTCATCCTTTGCATCTCAACTCTCTGAGTGCAATGCCGGAACCC ACCATGGAAGTAAATTCAAATTTGGTTAACAAGATGATGTTATTGGATGCATCAAGAATG AGTTCTTCAAAAAAACCATATTACAAAGTTGTCTATGATTGTTTTGGATTAGGATTTGAA CATGAATATTTTGATGAAGAAGCAATGAGTAGATTCTTAGAGACTGATATAATTCCAATT AGTGTTAGCACACCGTCTAATAGACAGAATCTTCCAAAAGCAAGCATTGCCCCAAAAGAG GATACCCTCATTTTCGAGTCGAGATTTGAAAGTGGCAACCTAAGAAGAGCAATACAAATT TTTGATTACGAATACGACCTTATTCTAAAGTTTGATGTAGAGACCAGTGGTCACACTCAG TGGTTTTACTTCTCCGTTAGAAATGCAAAAAAAGGAAAAAAATACAAGTTCAACATTGTA AATTATTTGAAGCCTGGTAGCCTTTTTAATCAAGGTATGATGCCTTTGATTTATTCTGTA CATGATGCAAATACAAAAGGAAAAGGCTGGACCAGAGGGGGATCGGATATTTGTTATTAC AGAAATAATATCAGAAGGAAAACTGGAAATTTCTATACCCTTACTTTTACGGTCGAATTC GAAAATGACAACGACACTTATTTTTTTGCCTATTCCTACCCTTATACATACACAAATTTA CAGAACTATTTAAACAATCTTGAGAAAGACAAAATACGAAGTCAGTTTGTACGGAGAAGA ATATTGTGCCAAGATGTTGCCGGTAATGCATGCGATGTGCTGACAATCACATCCTTTGCA TGTGATCCAACAGCGCTAAAAAGGAGAAAAGGAATAGTACTAACAGCTAGAGTACATCCG GGTGAAAGTAATTCCAGTTGGATGATTAAGGGAGTTATTGATTTTTTGACAGGATCAAGT ATTGAATCAAAAGTATTAAGGGAAAATTTTATTTTCAAAATTGTACCAATGCTAAATCCA GATGGAGTCATTAACGGCAATTATCGTTGCTGTCTTACAGGCTCTGATTTAAATAGAAGA TGGCATGCTCCCAATGAAAAAACTCATCCCACTATTTACCACACTAAGAAAATGATTCTC GAATTTATGAAGGAACGAGAAATTGCGCTGTTTTGTGATTTTCATGGTCATAGTCGAAAA AAGAACATTTTCATGTACGGATGTACTGATTCAAAAACAGGTGTAGAAAGACTCACTCCA AAAGTATTTCCAAGATTGTTGTGGAAAATATCGCCTCACTTTTCATTCAACGATTGTCAG TTCGGAAAGCAAAAAGGTAAAGACACCACCGCCAGAGTAATCCTTCACAAAAGTGGCATC AAAAATTGCTTTACACTTGAAGCTTCATTTTGTGGACCAGATAATGGCATTCATAATGGA AAACATTTCACTTGCAAGCATTTCGAGCAGATGGGACACTACTTTTGTCAGGGAATTTTA GAATTTTGTAACCCAGAGAGAACTCAAGTCACTCTTATTTTGAAAGAGTTAGATTTATTG TTTCCAGAGAAGAGTGAAGAACCTATTTATTCAAAAGAATCGTATTCAAGCTCAGAAGAT
Download Fasta

Fasta :-

MMSSMRLISSAVMRNPSFYSLDERYPSSEDEYYDDDEEEEEIEYESPRITSSLFAAKTGT DFLLGPHPLHLNSLSAMPEPTMEVNSNLVNKMMLLDASRMSSSKKPYYKVVYDCFGLGFE HEYFDEEAMSRFLETDIIPISVSTPSNRQNLPKASIAPKEDTLIFESRFESGNLRRAIQI FDYEYDLILKFDVETSGHTQWFYFSVRNAKKGKKYKFNIVNYLKPGSLFNQGMMPLIYSV HDANTKGKGWTRGGSDICYYRNNIRRKTGNFYTLTFTVEFENDNDTYFFAYSYPYTYTNL QNYLNNLEKDKIRSQFVRRRILCQDVAGNACDVLTITSFACDPTALKRRKGIVLTARVHP GESNSSWMIKGVIDFLTGSSIESKVLRENFIFKIVPMLNPDGVINGNYRCCLTGSDLNRR WHAPNEKTHPTIYHTKKMILEFMKEREIALFCDFHGHSRKKNIFMYGCTDSKTGVERLTP KVFPRLLWKISPHFSFNDCQFGKQKGKDTTARVILHKSGIKNCFTLEASFCGPDNGIHNG KHFTCKHFEQMGHYFCQGILEFCNPERTQVTLILKELDLLFPEKSEEPIYSKESYSSSED

ECOD

title: Zn binding site
coordinates: H359,E362,H455

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0125430	101 S	ASRMSSSKK	0.992	unsp	NF0125430	101 S	ASRMSSSKK	0.992	unsp	NF0125430	101 S	ASRMSSSKK	0.992	unsp	NF0125430	102 S	SRMSSSKKP	0.995	unsp	NF0125430	479 T	VERLTPKVF	0.995	unsp	NF0125430	594 S	YSKESYSSS	0.995	unsp	NF0125430	596 S	KESYSSSED	0.993	unsp	NF0125430	597 S	ESYSSSED-	0.997	unsp	NF0125430	27 S	ERYPSSEDE	0.998	unsp	NF0125430	32 Y	SEDEYYDDD	0.991	unsp

NF0125430 | zinc carboxypeptidase family protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004181 GO:0008270

Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

ECOD

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India