NF0128070 | autophagy related protein atg8

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_IDPredictionOTHERSPmTPCS_Position
NF0128070OTHER0.9997520.0001020.000146
No Results

  • Fasta :-

    >NF0128070 MRYKDNPENTFEKRKAEASRIRQRYSDRIPVICEKAEKSNFPDIDKNKYLVPADLTVAQF VYIIRKRIKIDSTTNIFIFVNNVLPPSAALMSQLYEEQRDDDGFLYVTYSGENTFGQDQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0128070.fa Sequence name : NF0128070 Sequence length : 119 VALUES OF COMPUTED PARAMETERS Coef20 : 3.621 CoefTot : -0.135 ChDiff : 0 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.306 1.429 0.061 0.576 MesoH : -1.216 0.083 -0.537 0.116 MuHd_075 : 23.027 10.848 5.561 4.010 MuHd_095 : 22.225 10.226 5.892 4.458 MuHd_100 : 18.739 9.800 4.780 3.604 MuHd_105 : 16.015 7.274 3.950 2.348 Hmax_075 : -16.917 -8.050 -7.776 -1.622 Hmax_095 : -15.500 -7.400 -5.971 -1.540 Hmax_100 : -14.900 -6.400 -5.417 -1.090 Hmax_105 : -20.800 -7.000 -7.808 -2.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9377 0.0623 DFMC : 0.8681 0.1319
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 119 NF0128070 MRYKDNPENTFEKRKAEASRIRQRYSDRIPVICEKAEKSNFPDIDKNKYLVPADLTVAQFVYIIRKRIKIDSTTNIFIFV 80 NNVLPPSAALMSQLYEEQRDDDGFLYVTYSGENTFGQDQ 160 ................................................................................ 80 ....................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0128070 2 -----MR|YK 0.133 . NF0128070 4 ---MRYK|DN 0.069 . NF0128070 13 PENTFEK|RK 0.060 . NF0128070 14 ENTFEKR|KA 0.276 . NF0128070 15 NTFEKRK|AE 0.076 . NF0128070 20 RKAEASR|IR 0.087 . NF0128070 22 AEASRIR|QR 0.077 . NF0128070 24 ASRIRQR|YS 0.132 . NF0128070 28 RQRYSDR|IP 0.095 . NF0128070 35 IPVICEK|AE 0.060 . NF0128070 38 ICEKAEK|SN 0.074 . NF0128070 46 NFPDIDK|NK 0.054 . NF0128070 48 PDIDKNK|YL 0.076 . NF0128070 65 QFVYIIR|KR 0.080 . NF0128070 66 FVYIIRK|RI 0.068 . NF0128070 67 VYIIRKR|IK 0.165 . NF0128070 69 IIRKRIK|ID 0.069 . NF0128070 99 QLYEEQR|DD 0.104 . ____________________________^_________________

  • Fasta :-

    >NF0128070 ATGAGATACAAGGACAACCCAGAAAACACCTTTGAAAAGAGAAAGGCCGAAGCCAGCAGA ATAAGACAACGATATTCTGATCGTATCCCAGTGATTTGTGAGAAGGCCGAGAAATCAAAC TTCCCTGATATTGATAAGAACAAGTACTTGGTGCCTGCCGATCTCACCGTTGCTCAATTT GTTTACATTATTCGTAAGAGAATCAAGATTGATTCAACAACGAACATTTTTATTTTCGTG AATAACGTTTTACCTCCTAGTGCTGCTCTGATGAGTCAATTGTATGAAGAACAACGTGAT GATGATGGATTTTTATATGTTACTTACAGCGGAGAGAATACATTCGGACAAGATCAATAA
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  • Fasta :-

    MRYKDNPENTFEKRKAEASRIRQRYSDRIPVICEKAEKSNFPDIDKNKYLVPADLTVAQF VYIIRKRIKIDSTTNIFIFVNNVLPPSAALMSQLYEEQRDDDGFLYVTYSGENTFGQDQ

  • title: Atg7 interaction site
  • coordinates: R28,E37,K38,K46,Y49,A58,Q59,V61,Y62,I63,R65,K66,R67,S72,T73,N75,I76,F77,F79,N82,V83,L84,P86,S87,A88,E112,N113
No Results
No Results
IDSitePeptideScoreMethod
NF012807019 SKAEASRIRQ0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India