NF0129610 | pug domain-containing protein

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
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Curated_GO_Function_IDs:
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Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0129610	OTHER	0.999882	0.000004	0.000113

No Results

Fasta :-
>NF0129610 MTKYRLDPNLNSLKKMIKKQAQHWINSNHQYFTPSTLHVLHSICHNIITHPHEPKFRCIK MENPKFKENILNVEGAMDLLYLVGFEQDPIEHTILYRCNGKEDEDLMVHDLSELCQAIEE SNHDYSTSVAQHHALSPRLREATSSSSTTTTTTQSTSSTTSFMTSPHSTTTTFSSISQHA EPTKHVSQMMSQMMSQISSIAHDEEYEKKQRELEERRKQLAEERRLKREEAQRIKNQAKL DRKEKHDEDEYEHELGVTAHSHLHNPQKGTPPGHNPFYSGM
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0129610.fa Sequence name : NF0129610 Sequence length : 281 VALUES OF COMPUTED PARAMETERS Coef20 : 3.707 CoefTot : -3.350 ChDiff : -6 ZoneTo : 52 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.088 -0.104 0.501 MesoH : -0.021 -0.211 -0.417 0.103 MuHd_075 : 34.801 20.218 11.889 7.350 MuHd_095 : 44.631 31.752 14.244 10.181 MuHd_100 : 38.732 28.784 11.447 8.923 MuHd_105 : 37.251 27.794 11.189 9.218 Hmax_075 : -0.817 15.517 0.278 2.520 Hmax_095 : 11.800 14.000 0.766 5.580 Hmax_100 : 10.500 10.800 -0.324 4.930 Hmax_105 : 12.600 16.683 1.356 5.238 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6387 0.3613 DFMC : 0.6218 0.3782

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 281 NF0129610 MTKYRLDPNLNSLKKMIKKQAQHWINSNHQYFTPSTLHVLHSICHNIITHPHEPKFRCIKMENPKFKENILNVEGAMDLL 80 YLVGFEQDPIEHTILYRCNGKEDEDLMVHDLSELCQAIEESNHDYSTSVAQHHALSPRLREATSSSSTTTTTTQSTSSTT 160 SFMTSPHSTTTTFSSISQHAEPTKHVSQMMSQMMSQISSIAHDEEYEKKQRELEERRKQLAEERRLKREEAQRIKNQAKL 240 DRKEKHDEDEYEHELGVTAHSHLHNPQKGTPPGHNPFYSGM 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0129610 3 ----MTK|YR 0.057 . NF0129610 5 --MTKYR|LD 0.074 . NF0129610 14 PNLNSLK|KM 0.062 . NF0129610 15 NLNSLKK|MI 0.143 . NF0129610 18 SLKKMIK|KQ 0.061 . NF0129610 19 LKKMIKK|QA 0.136 . NF0129610 55 THPHEPK|FR 0.074 . NF0129610 57 PHEPKFR|CI 0.112 . NF0129610 60 PKFRCIK|ME 0.128 . NF0129610 65 IKMENPK|FK 0.085 . NF0129610 67 MENPKFK|EN 0.083 . NF0129610 97 EHTILYR|CN 0.098 . NF0129610 101 LYRCNGK|ED 0.065 . NF0129610 138 HHALSPR|LR 0.096 . NF0129610 140 ALSPRLR|EA 0.127 . NF0129610 184 QHAEPTK|HV 0.117 . NF0129610 208 HDEEYEK|KQ 0.056 . NF0129610 209 DEEYEKK|QR 0.097 . NF0129610 211 EYEKKQR|EL 0.097 . NF0129610 216 QRELEER|RK 0.085 . NF0129610 217 RELEERR|KQ 0.102 . NF0129610 218 ELEERRK|QL 0.080 . NF0129610 224 KQLAEER|RL 0.086 . NF0129610 225 QLAEERR|LK 0.123 . NF0129610 227 AEERRLK|RE 0.102 . NF0129610 228 EERRLKR|EE 0.416 . NF0129610 233 KREEAQR|IK 0.091 . NF0129610 235 EEAQRIK|NQ 0.056 . NF0129610 239 RIKNQAK|LD 0.076 . NF0129610 242 NQAKLDR|KE 0.090 . NF0129610 243 QAKLDRK|EK 0.084 . NF0129610 245 KLDRKEK|HD 0.187 . NF0129610 268 HLHNPQK|GT 0.088 . ____________________________^_________________

Fasta :-
>NF0129610 ATGACCAAATATAGACTTGATCCTAATTTAAATTCTCTCAAAAAAATGATTAAAAAGCAA GCTCAGCATTGGATCAATTCCAACCATCAATACTTTACACCTTCAACTCTCCATGTGTTG CACAGTATTTGTCACAATATCATCACTCATCCACATGAACCCAAATTTAGATGTATCAAA ATGGAAAATCCAAAATTCAAAGAAAACATTTTAAACGTGGAAGGTGCAATGGATTTGTTG TATCTCGTCGGATTTGAACAAGATCCCATTGAACATACTATTTTATATCGATGCAATGGT AAAGAGGATGAAGATTTAATGGTGCATGATCTATCGGAGTTGTGTCAAGCCATCGAAGAG TCGAATCATGACTATTCCACCTCTGTTGCGCAACATCATGCACTGTCTCCTCGTCTTCGA GAAGCAACATCTTCATCATCAACAACAACAACAACCACTCAGAGCACTTCCTCTACCACA TCATTCATGACCTCTCCTCATTCCACAACAACAACCTTCTCCTCCATCAGTCAACATGCT GAGCCTACCAAACATGTCTCTCAAATGATGTCTCAAATGATGTCTCAAATATCCTCTATC GCTCATGATGAAGAGTATGAGAAGAAACAACGTGAGTTAGAGGAAAGAAGAAAACAACTT GCAGAAGAAAGAAGATTAAAGAGAGAAGAAGCTCAAAGAATAAAGAATCAAGCCAAATTG GACAGAAAAGAAAAGCATGATGAAGATGAATATGAACATGAATTAGGAGTAACAGCTCAT TCACACTTGCACAATCCTCAAAAAGGAACTCCACCTGGTCATAATCCTTTCTATTCTGGA ATGA
Download Fasta

Fasta :-

MTKYRLDPNLNSLKKMIKKQAQHWINSNHQYFTPSTLHVLHSICHNIITHPHEPKFRCIK MENPKFKENILNVEGAMDLLYLVGFEQDPIEHTILYRCNGKEDEDLMVHDLSELCQAIEE SNHDYSTSVAQHHALSPRLREATSSSSTTTTTTQSTSSTTSFMTSPHSTTTTFSSISQHA EPTKHVSQMMSQMMSQISSIAHDEEYEKKQRELEERRKQLAEERRLKREEAQRIKNQAKL DRKEKHDEDEYEHELGVTAHSHLHNPQKGTPPGHNPFYSGM

PUG domain

title: peptide binding site
coordinates: V39,S42,I43,N46,K55,F56,C58,I59,K60,N63,K65,N69

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0129610	T	156	0.794	0.054	NF0129610	T	159	0.789	0.119	NF0129610	T	160	0.787	0.031	NF0129610	T	151	0.761	0.018	NF0129610	T	152	0.753	0.032	NF0129610	T	150	0.744	0.049	NF0129610	T	149	0.743	0.033	NF0129610	T	153	0.742	0.085	NF0129610	S	157	0.738	0.023	NF0129610	T	164	0.732	0.087	NF0129610	T	148	0.726	0.026	NF0129610	S	158	0.725	0.018	NF0129610	S	155	0.709	0.047	NF0129610	S	161	0.699	0.019	NF0129610	T	143	0.693	0.032	NF0129610	T	172	0.686	0.043	NF0129610	T	170	0.685	0.034	NF0129610	T	169	0.683	0.121	NF0129610	T	171	0.676	0.023	NF0129610	S	146	0.639	0.024	NF0129610	S	147	0.638	0.019	NF0129610	S	165	0.638	0.042	NF0129610	S	145	0.622	0.068	NF0129610	S	168	0.621	0.030	NF0129610	S	144	0.605	0.060	NF0129610	S	174	0.531	0.048	NF0129610	S	175	0.510	0.028	NF0129610	S	279	0.508	0.075	NF0129610	T	183	0.503	0.250

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0129610	T	156	0.794	0.054	NF0129610	T	159	0.789	0.119	NF0129610	T	160	0.787	0.031	NF0129610	T	151	0.761	0.018	NF0129610	T	152	0.753	0.032	NF0129610	T	150	0.744	0.049	NF0129610	T	149	0.743	0.033	NF0129610	T	153	0.742	0.085	NF0129610	S	157	0.738	0.023	NF0129610	T	164	0.732	0.087	NF0129610	T	148	0.726	0.026	NF0129610	S	158	0.725	0.018	NF0129610	S	155	0.709	0.047	NF0129610	S	161	0.699	0.019	NF0129610	T	143	0.693	0.032	NF0129610	T	172	0.686	0.043	NF0129610	T	170	0.685	0.034	NF0129610	T	169	0.683	0.121	NF0129610	T	171	0.676	0.023	NF0129610	S	146	0.639	0.024	NF0129610	S	147	0.638	0.019	NF0129610	S	165	0.638	0.042	NF0129610	S	145	0.622	0.068	NF0129610	S	168	0.621	0.030	NF0129610	S	144	0.605	0.060	NF0129610	S	174	0.531	0.048	NF0129610	S	175	0.510	0.028	NF0129610	S	279	0.508	0.075	NF0129610	T	183	0.503	0.250

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0129610	165 S	SFMTSPHST	0.992	unsp	NF0129610	168 S	TSPHSTTTT	0.993	unsp

NF0129610 | pug domain-containing protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

PUG domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India