NF0130580 | serine carboxypeptidase-like 20-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004185      

  • Computed_GO_Functions:  serine-type carboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0130580SP0.0400570.9598130.000130CS pos: 31-32. SSG-QT. Pr: 0.9247
No Results

  • Fasta :-

    >NF0130580 MFRNKFFSLLSLSLLLALSFLLLILLEFSSGQTALDHQVTYLPGFNGAIKFKSYTGYLKA NATRGHYLFYWFMESQNNPATDPVVWWTNGGPGCSSIDGMVSEHGPFVVLQDGKTVVDNP YAWNKRVNMVFLEQPIGVGYSYSDTPADYQTINDDVAAADMNGAIRDFFTRFPQYLKNDF YIAGESYGGVYVPTAAFRVIQGNQQGEVPKINLKGIMVGNGVTDAESDANSVPLFYKEHS LITAEDYNKGFVACKRNFYANQNVPDCSNFLQLVSSSLNHLNPYYIYDSCTWLGDNGLTK KNSKNHPLFELYKQRPKTKKPFIVGAESDSPCVPDHSIISYFNNPAVRAAIGATHPIASP SGWQVCSTFINYTQIYTTLLPFYSKLLPEIRILAYSGDVDCVLNTSGTKAGLDKLGLNVS LPYTKWIHYDENNDIVVDGFIRKYSNGKGLTFVTVRGAGHMVPQYRPQQALRMLDNFLND KWITKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0130580.fa Sequence name : NF0130580 Sequence length : 486 VALUES OF COMPUTED PARAMETERS Coef20 : 5.096 CoefTot : 1.941 ChDiff : 0 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.412 2.853 0.480 0.869 MesoH : 0.183 0.519 -0.201 0.328 MuHd_075 : 19.879 11.796 4.389 4.686 MuHd_095 : 13.604 13.087 4.427 3.913 MuHd_100 : 16.409 13.803 4.658 4.712 MuHd_105 : 15.043 9.277 3.822 3.854 Hmax_075 : 19.512 17.000 3.227 6.240 Hmax_095 : 20.200 22.600 3.613 7.455 Hmax_100 : 20.200 22.600 3.613 7.420 Hmax_105 : 19.133 18.900 3.038 6.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9492 0.0508 DFMC : 0.9269 0.0731
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 486 NF0130580 MFRNKFFSLLSLSLLLALSFLLLILLEFSSGQTALDHQVTYLPGFNGAIKFKSYTGYLKANATRGHYLFYWFMESQNNPA 80 TDPVVWWTNGGPGCSSIDGMVSEHGPFVVLQDGKTVVDNPYAWNKRVNMVFLEQPIGVGYSYSDTPADYQTINDDVAAAD 160 MNGAIRDFFTRFPQYLKNDFYIAGESYGGVYVPTAAFRVIQGNQQGEVPKINLKGIMVGNGVTDAESDANSVPLFYKEHS 240 LITAEDYNKGFVACKRNFYANQNVPDCSNFLQLVSSSLNHLNPYYIYDSCTWLGDNGLTKKNSKNHPLFELYKQRPKTKK 320 PFIVGAESDSPCVPDHSIISYFNNPAVRAAIGATHPIASPSGWQVCSTFINYTQIYTTLLPFYSKLLPEIRILAYSGDVD 400 CVLNTSGTKAGLDKLGLNVSLPYTKWIHYDENNDIVVDGFIRKYSNGKGLTFVTVRGAGHMVPQYRPQQALRMLDNFLND 480 KWITKN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0130580 3 ----MFR|NK 0.089 . NF0130580 5 --MFRNK|FF 0.063 . NF0130580 50 GFNGAIK|FK 0.069 . NF0130580 52 NGAIKFK|SY 0.112 . NF0130580 59 SYTGYLK|AN 0.060 . NF0130580 64 LKANATR|GH 0.085 . NF0130580 114 VVLQDGK|TV 0.062 . NF0130580 125 NPYAWNK|RV 0.081 . NF0130580 126 PYAWNKR|VN 0.151 . NF0130580 166 DMNGAIR|DF 0.117 . NF0130580 171 IRDFFTR|FP 0.098 . NF0130580 177 RFPQYLK|ND 0.054 . NF0130580 198 VPTAAFR|VI 0.094 . NF0130580 210 QQGEVPK|IN 0.075 . NF0130580 214 VPKINLK|GI 0.070 . NF0130580 237 SVPLFYK|EH 0.060 . NF0130580 249 TAEDYNK|GF 0.062 . NF0130580 255 KGFVACK|RN 0.063 . NF0130580 256 GFVACKR|NF 0.174 . NF0130580 300 GDNGLTK|KN 0.075 . NF0130580 301 DNGLTKK|NS 0.079 . NF0130580 304 LTKKNSK|NH 0.055 . NF0130580 313 PLFELYK|QR 0.056 . NF0130580 315 FELYKQR|PK 0.099 . NF0130580 317 LYKQRPK|TK 0.059 . NF0130580 319 KQRPKTK|KP 0.079 . NF0130580 320 QRPKTKK|PF 0.128 . NF0130580 348 FNNPAVR|AA 0.127 . NF0130580 385 LLPFYSK|LL 0.058 . NF0130580 391 KLLPEIR|IL 0.081 . NF0130580 409 LNTSGTK|AG 0.056 . NF0130580 414 TKAGLDK|LG 0.058 . NF0130580 425 VSLPYTK|WI 0.064 . NF0130580 442 VVDGFIR|KY 0.081 . NF0130580 443 VDGFIRK|YS 0.097 . NF0130580 448 RKYSNGK|GL 0.068 . NF0130580 456 LTFVTVR|GA 0.150 . NF0130580 466 HMVPQYR|PQ 0.094 . NF0130580 472 RPQQALR|ML 0.126 . NF0130580 481 DNFLNDK|WI 0.064 . NF0130580 485 NDKWITK|N- 0.062 . ____________________________^_________________

  • Fasta :-

    >NF0130580 ATGTTTCGCAACAAATTTTTCTCGTTGTTGTCGTTATCGTTACTTCTCGCTTTATCATTC CTCTTGTTGATTCTTCTCGAGTTCAGTTCGGGACAAACCGCTCTGGATCATCAAGTTACT TATTTGCCTGGTTTTAATGGTGCTATCAAGTTCAAGAGTTATACAGGATATTTAAAGGCT AATGCTACTCGAGGACATTATTTGTTTTATTGGTTTATGGAATCTCAGAATAATCCGGCA ACGGATCCGGTGGTTTGGTGGACCAATGGTGGACCAGGTTGTTCCTCCATTGACGGAATG GTCTCTGAGCACGGTCCTTTCGTTGTTTTACAGGATGGAAAAACAGTGGTAGATAATCCT TATGCATGGAACAAGAGAGTGAATATGGTTTTTTTGGAACAACCAATTGGAGTTGGATAT AGTTATAGTGACACTCCTGCAGATTATCAAACAATCAATGATGATGTGGCTGCTGCTGAT ATGAATGGAGCTATTCGCGACTTCTTTACAAGATTTCCACAATATTTGAAGAATGATTTT TACATTGCTGGTGAATCGTATGGTGGAGTTTATGTGCCAACTGCTGCTTTCAGAGTGATT CAAGGAAATCAACAAGGTGAAGTACCAAAGATTAATCTTAAGGGTATCATGGTTGGAAAT GGTGTCACAGATGCTGAAAGTGATGCCAACTCAGTGCCATTGTTTTACAAGGAACACAGT TTAATTACTGCTGAGGATTATAATAAGGGATTCGTTGCTTGCAAGAGAAATTTCTATGCC AATCAGAATGTGCCAGATTGTTCAAACTTTTTACAATTAGTTTCTTCATCATTGAATCAT CTCAATCCTTATTATATTTATGATTCATGCACTTGGTTAGGTGATAATGGATTAACCAAG AAGAATTCCAAAAATCATCCTCTCTTTGAATTGTACAAGCAACGCCCAAAAACAAAAAAG CCATTCATTGTGGGAGCTGAAAGTGACAGCCCATGTGTTCCTGACCATTCAATCATTTCA TACTTTAACAATCCTGCTGTGAGAGCTGCCATTGGAGCCACTCATCCAATTGCCTCACCA TCAGGATGGCAAGTTTGTTCCACTTTTATCAATTACACACAAATTTATACAACATTATTG CCATTCTATTCCAAGTTATTGCCAGAAATTAGAATTTTAGCATATTCTGGTGATGTGGAC TGTGTATTGAATACATCGGGAACTAAGGCAGGTCTTGACAAGTTAGGGCTTAATGTTTCT CTTCCTTACACAAAGTGGATTCATTACGATGAAAATAATGACATTGTTGTGGATGGATTT ATTAGAAAATACTCGAATGGAAAGGGTTTGACATTTGTCACAGTTCGTGGAGCTGGTCAT ATGGTACCTCAATATAGACCACAACAAGCACTGAGAATGTTGGACAACTTTTTGAACGAC AAATGGATTACTAAAAATTAA
  • Download Fasta

  • Fasta :-

    MFRNKFFSLLSLSLLLALSFLLLILLEFSSGQTALDHQVTYLPGFNGAIKFKSYTGYLKA NATRGHYLFYWFMESQNNPATDPVVWWTNGGPGCSSIDGMVSEHGPFVVLQDGKTVVDNP YAWNKRVNMVFLEQPIGVGYSYSDTPADYQTINDDVAAADMNGAIRDFFTRFPQYLKNDF YIAGESYGGVYVPTAAFRVIQGNQQGEVPKINLKGIMVGNGVTDAESDANSVPLFYKEHS LITAEDYNKGFVACKRNFYANQNVPDCSNFLQLVSSSLNHLNPYYIYDSCTWLGDNGLTK KNSKNHPLFELYKQRPKTKKPFIVGAESDSPCVPDHSIISYFNNPAVRAAIGATHPIASP SGWQVCSTFINYTQIYTTLLPFYSKLLPEIRILAYSGDVDCVLNTSGTKAGLDKLGLNVS LPYTKWIHYDENNDIVVDGFIRKYSNGKGLTFVTVRGAGHMVPQYRPQQALRMLDNFLND KWITKN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NF0130580141 SGVGYSYSDT0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India