PBANKA_0201300 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0201300OTHER0.9999460.0000440.000010
No Results

  • Fasta :-

    >PBANKA_0201300 MEEIELNNDELMNTKCNLDGDPKTNWFCNKNGLLLKTYGWLVKNAIGVILLIHGLKSHTR LTYMKINLKMPNNNEGLVVDNNNYYIYKDSWIENFNQNGYSVYALDLQGHGESQGWENIK GNFSCFDDLVDDVIQYMNQIQDEISNDNQTDDESNHILTTEKKRLPMYIIGHSLGGGIAL RILQLLRKEQEDSINSGDASDNKKCNIMLGNSTNINEIDNDMVEDIINDMHNSNDRAIEC MNNTHLVTNSNGYDSDNSCYSASSTTNAIDSGSDQDRGCYNHLDKLNIKGCITLSGMMRF KTIWNARNDSIKRFYLPAVNFMSRVAPHARISSELGYKRSKYVTNICKYDKFRNNSGIKF KCIYEIIKASITLNCNIKYMPKDVPLFFVHSKDDSICYYKGAVSFHNQANVNKKNLHIVD GMNHAITVEPGNENILKKIIEWISNLRRDDEIEDEK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0201300.fa Sequence name : PBANKA_0201300 Sequence length : 456 VALUES OF COMPUTED PARAMETERS Coef20 : 2.920 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.541 0.080 0.646 MesoH : -1.066 -0.047 -0.569 0.133 MuHd_075 : 9.679 8.420 3.310 1.341 MuHd_095 : 20.099 12.512 5.887 2.548 MuHd_100 : 22.731 14.576 5.172 3.512 MuHd_105 : 20.736 12.050 3.255 3.389 Hmax_075 : -2.975 2.975 -2.707 1.286 Hmax_095 : 1.100 7.200 -1.312 1.790 Hmax_100 : 1.900 8.500 -2.495 2.600 Hmax_105 : 3.700 6.300 -1.706 2.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9920 0.0080 DFMC : 0.9940 0.0060
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 456 PBANKA_0201300 MEEIELNNDELMNTKCNLDGDPKTNWFCNKNGLLLKTYGWLVKNAIGVILLIHGLKSHTRLTYMKINLKMPNNNEGLVVD 80 NNNYYIYKDSWIENFNQNGYSVYALDLQGHGESQGWENIKGNFSCFDDLVDDVIQYMNQIQDEISNDNQTDDESNHILTT 160 EKKRLPMYIIGHSLGGGIALRILQLLRKEQEDSINSGDASDNKKCNIMLGNSTNINEIDNDMVEDIINDMHNSNDRAIEC 240 MNNTHLVTNSNGYDSDNSCYSASSTTNAIDSGSDQDRGCYNHLDKLNIKGCITLSGMMRFKTIWNARNDSIKRFYLPAVN 320 FMSRVAPHARISSELGYKRSKYVTNICKYDKFRNNSGIKFKCIYEIIKASITLNCNIKYMPKDVPLFFVHSKDDSICYYK 400 GAVSFHNQANVNKKNLHIVDGMNHAITVEPGNENILKKIIEWISNLRRDDEIEDEK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0201300 15 DELMNTK|CN 0.059 . PBANKA_0201300 23 NLDGDPK|TN 0.057 . PBANKA_0201300 30 TNWFCNK|NG 0.059 . PBANKA_0201300 36 KNGLLLK|TY 0.067 . PBANKA_0201300 43 TYGWLVK|NA 0.072 . PBANKA_0201300 56 LLIHGLK|SH 0.068 . PBANKA_0201300 60 GLKSHTR|LT 0.101 . PBANKA_0201300 65 TRLTYMK|IN 0.066 . PBANKA_0201300 69 YMKINLK|MP 0.057 . PBANKA_0201300 88 NNYYIYK|DS 0.077 . PBANKA_0201300 120 QGWENIK|GN 0.072 . PBANKA_0201300 162 HILTTEK|KR 0.053 . PBANKA_0201300 163 ILTTEKK|RL 0.083 . PBANKA_0201300 164 LTTEKKR|LP 0.175 . PBANKA_0201300 181 GGGIALR|IL 0.074 . PBANKA_0201300 187 RILQLLR|KE 0.061 . PBANKA_0201300 188 ILQLLRK|EQ 0.092 . PBANKA_0201300 203 GDASDNK|KC 0.066 . PBANKA_0201300 204 DASDNKK|CN 0.113 . PBANKA_0201300 236 MHNSNDR|AI 0.131 . PBANKA_0201300 277 SGSDQDR|GC 0.132 . PBANKA_0201300 285 CYNHLDK|LN 0.067 . PBANKA_0201300 289 LDKLNIK|GC 0.064 . PBANKA_0201300 299 TLSGMMR|FK 0.113 . PBANKA_0201300 301 SGMMRFK|TI 0.076 . PBANKA_0201300 307 KTIWNAR|ND 0.109 . PBANKA_0201300 312 ARNDSIK|RF 0.064 . PBANKA_0201300 313 RNDSIKR|FY 0.181 . PBANKA_0201300 324 AVNFMSR|VA 0.099 . PBANKA_0201300 330 RVAPHAR|IS 0.115 . PBANKA_0201300 338 SSELGYK|RS 0.057 . PBANKA_0201300 339 SELGYKR|SK 0.175 . PBANKA_0201300 341 LGYKRSK|YV 0.077 . PBANKA_0201300 348 YVTNICK|YD 0.056 . PBANKA_0201300 351 NICKYDK|FR 0.062 . PBANKA_0201300 353 CKYDKFR|NN 0.113 . PBANKA_0201300 359 RNNSGIK|FK 0.074 . PBANKA_0201300 361 NSGIKFK|CI 0.101 . PBANKA_0201300 368 CIYEIIK|AS 0.060 . PBANKA_0201300 378 TLNCNIK|YM 0.070 . PBANKA_0201300 382 NIKYMPK|DV 0.077 . PBANKA_0201300 392 LFFVHSK|DD 0.074 . PBANKA_0201300 400 DSICYYK|GA 0.065 . PBANKA_0201300 413 NQANVNK|KN 0.072 . PBANKA_0201300 414 QANVNKK|NL 0.158 . PBANKA_0201300 437 GNENILK|KI 0.072 . PBANKA_0201300 438 NENILKK|II 0.141 . PBANKA_0201300 447 EWISNLR|RD 0.079 . PBANKA_0201300 448 WISNLRR|DD 0.197 . PBANKA_0201300 456 DEIEDEK|-- 0.058 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0201300 ATGGAAGAAATTGAATTGAATAATGATGAATTAATGAATACAAAATGTAATTTAGATGGT GATCCTAAGACAAATTGGTTCTGTAATAAAAATGGTTTACTTTTAAAAACATATGGGTGG CTTGTTAAAAATGCTATAGGAGTTATATTGTTAATACATGGATTAAAATCTCATACTCGA TTAACTTATATGAAAATAAATTTAAAAATGCCAAATAACAATGAAGGGTTAGTAGTAGAC AATAATAATTACTATATCTATAAAGATAGTTGGATTGAAAATTTTAATCAAAATGGTTAT TCAGTATATGCACTAGATTTGCAAGGGCATGGCGAATCACAAGGATGGGAAAATATAAAA GGCAACTTTAGTTGTTTTGATGATCTAGTTGATGATGTAATACAATATATGAATCAGATT CAAGATGAAATCTCAAATGATAATCAAACGGATGATGAATCTAACCATATATTAACAACT GAAAAAAAAAGACTACCTATGTATATTATTGGGCATTCGTTGGGAGGAGGTATTGCTTTA AGAATATTACAATTATTAAGGAAAGAACAAGAAGATAGCATTAATTCTGGAGATGCAAGT GACAATAAAAAATGTAACATCATGTTAGGAAATTCTACTAACATTAATGAAATCGACAAT GATATGGTAGAAGATATTATTAATGATATGCATAATTCTAACGATCGTGCTATAGAATGC ATGAATAATACACATTTAGTTACCAATTCTAATGGTTATGATTCTGATAATTCCTGTTAT AGTGCCTCTTCTACGACAAATGCTATTGATAGTGGTAGTGATCAAGATAGAGGATGCTAT AATCATTTAGATAAGTTAAATATTAAAGGTTGCATAACATTATCAGGTATGATGAGATTT AAAACAATATGGAATGCTAGGAACGATTCAATCAAGCGTTTTTATTTACCTGCAGTAAAT TTCATGTCTCGTGTCGCGCCTCATGCACGAATTTCGTCAGAATTAGGTTATAAAAGGTCC AAATATGTTACTAATATATGTAAATATGATAAATTTCGAAATAATAGTGGAATAAAATTC AAATGTATATATGAAATTATAAAAGCTTCGATCACATTGAATTGTAATATTAAGTATATG CCAAAAGATGTCCCTTTATTTTTTGTACATTCAAAAGATGATAGTATTTGTTATTATAAA GGGGCAGTTTCATTTCATAATCAAGCAAATGTTAATAAAAAAAACTTACATATTGTTGAT GGTATGAATCATGCTATAACGGTAGAGCCAGGAAATGAAAACATTTTAAAAAAAATTATT GAATGGATTTCTAATTTAAGAAGAGATGATGAAATAGAAGATGAAAAATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELMNTKCNLDGDPKTNWFCNKNGLLLKTYGWLVKNAIGVILLIHGLKSHTR LTYMKINLKMPNNNEGLVVDNNNYYIYKDSWIENFNQNGYSVYALDLQGHGESQGWENIK GNFSCFDDLVDDVIQYMNQIQDEISNDNQTDDESNHILTTEKKRLPMYIIGHSLGGGIAL RILQLLRKEQEDSINSGDASDNKKCNIMLGNSTNINEIDNDMVEDIINDMHNSNDRAIEC MNNTHLVTNSNGYDSDNSCYSASSTTNAIDSGSDQDRGCYNHLDKLNIKGCITLSGMMRF KTIWNARNDSIKRFYLPAVNFMSRVAPHARISSELGYKRSKYVTNICKYDKFRNNSGIKF KCIYEIIKASITLNCNIKYMPKDVPLFFVHSKDDSICYYKGAVSFHNQANVNKKNLHIVD GMNHAITVEPGNENILKKIIEWISNLRRDDEIEDEK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0201300271 SNAIDSGSDQ0.997unspPBANKA_0201300310 SARNDSIKRF0.992unsp

PBANKA_020130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India