PBANKA_0304800 | serine repeat antigen 4

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0304800SP0.0326230.9673060.000071CS pos: 24-25. INT-QT. Pr: 0.6757
No Results

  • Fasta :-

    >PBANKA_0304800 MKPRIYLLLVSCAIFTINIHEINTQTSNPPNDIIDDVYTNVQNDNDKSNQDLDDEFQNGL NTSSGLSTNIGQTNVEKESDNNEKNESLNNETSYMKTLIKSSLSKNGKGIKVIGICDEDF RIYFAPYIWIYVTLSENIIKIEPENGVSTSINLNNLNNKCNDKKNDTFKLTAKIEEDILK IKWETHTNETDQNPKRDIKKFRLPDLSKGLTSIQIFTANAKENIIESKTYDIDNNIPEKC SVISANCFLGGSLNIESCYHCTLLAQKYPNDDECFNYISSELKNKINNDTIIKGEDDLDE NILRENIYKILKKMYNKDSDYCDNNRCNKKMITNIKELDTDLQIYLKNYCDILKKVDKSG TLDAHEIANEVEAFNNLIRLLNSHTNEKIYILYEKLRNPAICVKNINEWIIKKRGLVISN EYDINLHNVTQESNITNILNETYNEEDTEEIGNDIQNNEIDNENEIMDLKSLSNKKLASA YYTSSRYCNKDYCDRWKDKTSCISNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRS SALYVANCSQRKKSEICDIGSNPIEFLQILHDAKYLPLESNYPYSYYRVGGSCPRPKSDW TNLWGNNKLLYFKSRSIGFMSSYGFIAITSSNHIYDFDTYIQIIKNEVRNKGSVIAYIKT NGVIDYDFNGKIIHSLCGDDNDYADHAATIIGYGNYISESGEKRSYWLIRNSWGYYWGDE GNFKVDIYGPQHCKYNFIQTVVFFKLDLGVIEVPKKKNNQVYKYFSNNIPAFFTNIFYSN YNKRWDQFRSSEELNNYNNNISISGQTDNQINANNDFYNEDIDHINEISTSSKNISIQKK IDITHVLKYVKNNKTQTSFIKYDDILEIEYEHNCSRVQSIGLKNKNECKSFCLENWIKCK NYTSPGYCLATLYSGEDCFFCSI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0304800.fa Sequence name : PBANKA_0304800 Sequence length : 923 VALUES OF COMPUTED PARAMETERS Coef20 : 4.447 CoefTot : -0.142 ChDiff : -22 ZoneTo : 20 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 1.665 0.188 0.601 MesoH : -0.841 0.047 -0.446 0.173 MuHd_075 : 13.407 11.043 2.454 3.148 MuHd_095 : 9.022 10.116 3.738 3.082 MuHd_100 : 12.619 6.131 3.323 3.026 MuHd_105 : 15.528 6.761 4.730 3.154 Hmax_075 : 21.817 28.350 5.465 8.867 Hmax_095 : 17.500 19.338 5.178 5.688 Hmax_100 : 18.700 21.200 5.338 6.440 Hmax_105 : 20.417 25.550 6.325 7.572 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9533 0.0467 DFMC : 0.9365 0.0635
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 923 PBANKA_0304800 MKPRIYLLLVSCAIFTINIHEINTQTSNPPNDIIDDVYTNVQNDNDKSNQDLDDEFQNGLNTSSGLSTNIGQTNVEKESD 80 NNEKNESLNNETSYMKTLIKSSLSKNGKGIKVIGICDEDFRIYFAPYIWIYVTLSENIIKIEPENGVSTSINLNNLNNKC 160 NDKKNDTFKLTAKIEEDILKIKWETHTNETDQNPKRDIKKFRLPDLSKGLTSIQIFTANAKENIIESKTYDIDNNIPEKC 240 SVISANCFLGGSLNIESCYHCTLLAQKYPNDDECFNYISSELKNKINNDTIIKGEDDLDENILRENIYKILKKMYNKDSD 320 YCDNNRCNKKMITNIKELDTDLQIYLKNYCDILKKVDKSGTLDAHEIANEVEAFNNLIRLLNSHTNEKIYILYEKLRNPA 400 ICVKNINEWIIKKRGLVISNEYDINLHNVTQESNITNILNETYNEEDTEEIGNDIQNNEIDNENEIMDLKSLSNKKLASA 480 YYTSSRYCNKDYCDRWKDKTSCISNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRSSALYVANCSQRKKSEICDIG 560 SNPIEFLQILHDAKYLPLESNYPYSYYRVGGSCPRPKSDWTNLWGNNKLLYFKSRSIGFMSSYGFIAITSSNHIYDFDTY 640 IQIIKNEVRNKGSVIAYIKTNGVIDYDFNGKIIHSLCGDDNDYADHAATIIGYGNYISESGEKRSYWLIRNSWGYYWGDE 720 GNFKVDIYGPQHCKYNFIQTVVFFKLDLGVIEVPKKKNNQVYKYFSNNIPAFFTNIFYSNYNKRWDQFRSSEELNNYNNN 800 ISISGQTDNQINANNDFYNEDIDHINEISTSSKNISIQKKIDITHVLKYVKNNKTQTSFIKYDDILEIEYEHNCSRVQSI 880 GLKNKNECKSFCLENWIKCKNYTSPGYCLATLYSGEDCFFCSI 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0304800 2 -----MK|PR 0.060 . PBANKA_0304800 4 ---MKPR|IY 0.084 . PBANKA_0304800 47 VQNDNDK|SN 0.083 . PBANKA_0304800 77 GQTNVEK|ES 0.069 . PBANKA_0304800 84 ESDNNEK|NE 0.064 . PBANKA_0304800 96 NETSYMK|TL 0.057 . PBANKA_0304800 100 YMKTLIK|SS 0.066 . PBANKA_0304800 105 IKSSLSK|NG 0.065 . PBANKA_0304800 108 SLSKNGK|GI 0.088 . PBANKA_0304800 111 KNGKGIK|VI 0.073 . PBANKA_0304800 121 ICDEDFR|IY 0.074 . PBANKA_0304800 140 LSENIIK|IE 0.061 . PBANKA_0304800 159 LNNLNNK|CN 0.085 . PBANKA_0304800 163 NNKCNDK|KN 0.065 . PBANKA_0304800 164 NKCNDKK|ND 0.096 . PBANKA_0304800 169 KKNDTFK|LT 0.096 . PBANKA_0304800 173 TFKLTAK|IE 0.077 . PBANKA_0304800 180 IEEDILK|IK 0.060 . PBANKA_0304800 182 EDILKIK|WE 0.062 . PBANKA_0304800 195 ETDQNPK|RD 0.057 . PBANKA_0304800 196 TDQNPKR|DI 0.310 . PBANKA_0304800 199 NPKRDIK|KF 0.090 . PBANKA_0304800 200 PKRDIKK|FR 0.100 . PBANKA_0304800 202 RDIKKFR|LP 0.104 . PBANKA_0304800 208 RLPDLSK|GL 0.065 . PBANKA_0304800 221 IFTANAK|EN 0.061 . PBANKA_0304800 228 ENIIESK|TY 0.067 . PBANKA_0304800 239 DNNIPEK|CS 0.064 . PBANKA_0304800 267 CTLLAQK|YP 0.058 . PBANKA_0304800 283 YISSELK|NK 0.063 . PBANKA_0304800 285 SSELKNK|IN 0.066 . PBANKA_0304800 293 NNDTIIK|GE 0.060 . PBANKA_0304800 304 LDENILR|EN 0.073 . PBANKA_0304800 309 LRENIYK|IL 0.067 . PBANKA_0304800 312 NIYKILK|KM 0.056 . PBANKA_0304800 313 IYKILKK|MY 0.090 . PBANKA_0304800 317 LKKMYNK|DS 0.073 . PBANKA_0304800 326 DYCDNNR|CN 0.078 . PBANKA_0304800 329 DNNRCNK|KM 0.127 . PBANKA_0304800 330 NNRCNKK|MI 0.120 . PBANKA_0304800 336 KMITNIK|EL 0.070 . PBANKA_0304800 347 DLQIYLK|NY 0.064 . PBANKA_0304800 354 NYCDILK|KV 0.076 . PBANKA_0304800 355 YCDILKK|VD 0.071 . PBANKA_0304800 358 ILKKVDK|SG 0.074 . PBANKA_0304800 379 AFNNLIR|LL 0.085 . PBANKA_0304800 388 NSHTNEK|IY 0.062 . PBANKA_0304800 395 IYILYEK|LR 0.061 . PBANKA_0304800 397 ILYEKLR|NP 0.087 . PBANKA_0304800 404 NPAICVK|NI 0.065 . PBANKA_0304800 412 INEWIIK|KR 0.065 . PBANKA_0304800 413 NEWIIKK|RG 0.068 . PBANKA_0304800 414 EWIIKKR|GL 0.207 . PBANKA_0304800 470 NEIMDLK|SL 0.075 . PBANKA_0304800 475 LKSLSNK|KL 0.074 . PBANKA_0304800 476 KSLSNKK|LA 0.118 . PBANKA_0304800 486 AYYTSSR|YC 0.085 . PBANKA_0304800 490 SSRYCNK|DY 0.081 . PBANKA_0304800 495 NKDYCDR|WK 0.077 . PBANKA_0304800 497 DYCDRWK|DK 0.072 . PBANKA_0304800 499 CDRWKDK|TS 0.071 . PBANKA_0304800 523 CWVFASK|LH 0.058 . PBANKA_0304800 530 LHLETIR|CM 0.084 . PBANKA_0304800 533 ETIRCMR|GY 0.347 . PBANKA_0304800 539 RGYGHYR|SS 0.114 . PBANKA_0304800 551 VANCSQR|KK 0.105 . PBANKA_0304800 552 ANCSQRK|KS 0.085 . PBANKA_0304800 553 NCSQRKK|SE 0.147 . PBANKA_0304800 574 QILHDAK|YL 0.061 . PBANKA_0304800 588 YPYSYYR|VG 0.085 . PBANKA_0304800 595 VGGSCPR|PK 0.086 . PBANKA_0304800 597 GSCPRPK|SD 0.103 . PBANKA_0304800 608 NLWGNNK|LL 0.058 . PBANKA_0304800 613 NKLLYFK|SR 0.084 . PBANKA_0304800 615 LLYFKSR|SI 0.185 . PBANKA_0304800 645 TYIQIIK|NE 0.055 . PBANKA_0304800 649 IIKNEVR|NK 0.101 . PBANKA_0304800 651 KNEVRNK|GS 0.066 . PBANKA_0304800 659 SVIAYIK|TN 0.067 . PBANKA_0304800 671 DYDFNGK|II 0.057 . PBANKA_0304800 703 ISESGEK|RS 0.057 . PBANKA_0304800 704 SESGEKR|SY 0.383 . PBANKA_0304800 710 RSYWLIR|NS 0.122 . PBANKA_0304800 724 GDEGNFK|VD 0.060 . PBANKA_0304800 734 YGPQHCK|YN 0.068 . PBANKA_0304800 745 QTVVFFK|LD 0.060 . PBANKA_0304800 755 GVIEVPK|KK 0.060 . PBANKA_0304800 756 VIEVPKK|KN 0.100 . PBANKA_0304800 757 IEVPKKK|NN 0.085 . PBANKA_0304800 763 KNNQVYK|YF 0.119 . PBANKA_0304800 783 FYSNYNK|RW 0.070 . PBANKA_0304800 784 YSNYNKR|WD 0.139 . PBANKA_0304800 789 KRWDQFR|SS 0.193 . PBANKA_0304800 833 EISTSSK|NI 0.082 . PBANKA_0304800 839 KNISIQK|KI 0.063 . PBANKA_0304800 840 NISIQKK|ID 0.115 . PBANKA_0304800 848 DITHVLK|YV 0.071 . PBANKA_0304800 851 HVLKYVK|NN 0.058 . PBANKA_0304800 854 KYVKNNK|TQ 0.056 . PBANKA_0304800 861 TQTSFIK|YD 0.077 . PBANKA_0304800 876 YEHNCSR|VQ 0.103 . PBANKA_0304800 883 VQSIGLK|NK 0.059 . PBANKA_0304800 885 SIGLKNK|NE 0.068 . PBANKA_0304800 889 KNKNECK|SF 0.081 . PBANKA_0304800 898 CLENWIK|CK 0.058 . PBANKA_0304800 900 ENWIKCK|NY 0.065 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0304800 ATGAAGCCTCGTATCTATCTCCTTTTAGTATCATGTGCAATATTTACTATAAATATACAC GAAATTAATACGCAAACCTCAAACCCACCCAATGATATAATAGATGATGTTTATACAAAT GTGCAAAATGATAATGACAAATCAAACCAAGATTTAGATGATGAATTTCAAAATGGATTA AATACTTCTTCAGGATTATCAACAAATATAGGTCAAACAAATGTAGAAAAGGAATCTGAT AATAATGAAAAAAATGAATCTTTAAATAATGAAACATCATATATGAAAACATTAATAAAA TCATCTTTATCAAAAAATGGTAAAGGGATTAAAGTTATTGGTATATGCGATGAAGATTTC AGAATTTATTTTGCTCCTTATATATGGATTTACGTTACATTATCAGAAAATATAATAAAA ATAGAACCTGAAAATGGTGTAAGCACTTCCATAAACTTAAACAATTTAAATAATAAATGT AATGATAAAAAAAATGACACTTTTAAACTCACTGCTAAAATTGAGGAAGATATTCTAAAA ATAAAATGGGAAACACACACTAATGAGACTGATCAAAACCCTAAAAGGGATATTAAAAAA TTTAGGCTTCCAGATTTATCTAAAGGCCTTACATCTATCCAAATATTCACAGCAAATGCA AAAGAAAACATAATTGAAAGTAAAACTTATGACATAGATAACAATATTCCGGAAAAATGT AGTGTAATTTCAGCTAACTGTTTTTTGGGAGGAAGTTTAAACATTGAAAGTTGCTATCAT TGTACATTGCTAGCTCAAAAATATCCAAATGATGATGAATGTTTTAATTATATTTCTAGC GAATTAAAAAATAAAATTAATAATGATACTATAATAAAAGGAGAAGATGATTTAGATGAA AATATATTAAGAGAAAATATTTATAAAATATTGAAAAAAATGTATAATAAGGATTCAGAC TATTGTGATAATAATAGATGTAATAAAAAAATGATAACAAATATAAAAGAATTAGATACT GATTTACAAATATACTTAAAAAATTATTGCGATATTTTAAAAAAGGTAGACAAAAGTGGC ACATTAGATGCTCATGAAATAGCTAACGAAGTTGAAGCATTTAACAATTTAATAAGATTA CTTAATTCACATACCAATGAAAAAATATATATATTATATGAAAAGCTTAGAAACCCAGCA ATTTGTGTAAAAAATATAAATGAATGGATAATTAAAAAAAGAGGTCTAGTTATATCAAAT GAATATGATATAAATCTACATAACGTTACACAAGAATCTAATATAACAAATATTTTAAAT GAAACATATAACGAAGAAGATACAGAAGAAATTGGTAATGATATACAAAATAACGAGATT GACAATGAAAATGAAATAATGGATTTAAAAAGTTTATCAAATAAAAAATTAGCATCTGCC TACTATACTAGTAGTAGATATTGTAATAAAGATTACTGTGATAGATGGAAAGATAAAACT AGTTGTATATCTAATATAGAAGTAGAAGAACAAGGAGAATGTGGTGTATGTTGGGTATTT GCATCTAAGTTACATTTAGAAACTATTAGATGCATGAGAGGATATGGTCATTATAGAAGT TCAGCACTTTATGTAGCCAATTGTTCACAAAGAAAAAAAAGTGAAATATGTGATATTGGT TCAAATCCAATCGAATTTTTACAAATTTTACATGATGCAAAATATTTGCCTTTAGAATCC AATTATCCATATTCATATTATCGTGTCGGAGGTTCATGCCCAAGACCAAAAAGTGATTGG ACTAATTTATGGGGTAATAATAAATTATTATATTTTAAATCAAGGTCAATAGGCTTTATG AGTTCATATGGTTTTATAGCTATAACTAGTTCAAATCATATATATGATTTTGATACATAT ATACAAATAATAAAAAACGAAGTAAGAAACAAAGGTTCAGTTATTGCTTATATTAAAACG AATGGTGTAATAGATTACGATTTTAATGGAAAAATAATTCATAGTTTATGTGGTGATGAT AATGATTATGCTGACCATGCAGCAACTATAATTGGATACGGTAATTATATAAGTGAAAGC GGAGAAAAAAGATCTTATTGGTTAATAAGAAATAGTTGGGGTTATTATTGGGGGGATGAA GGAAATTTTAAAGTTGATATATATGGCCCCCAACATTGTAAATATAACTTTATTCAAACT GTCGTTTTTTTTAAATTAGATTTAGGTGTAATTGAGGTGCCAAAAAAAAAAAATAATCAA GTTTACAAATATTTTTCTAATAATATTCCCGCCTTTTTTACAAATATCTTTTATAGTAAT TATAATAAACGTTGGGATCAATTTAGATCCAGTGAAGAACTAAATAACTATAACAACAAT ATTTCGATATCTGGTCAAACTGATAATCAAATAAACGCTAACAATGATTTTTATAATGAA GATATAGATCATATCAATGAAATATCTACTTCTTCAAAAAATATTTCAATTCAGAAAAAA ATAGACATTACCCATGTTTTGAAATATGTTAAAAACAATAAAACACAAACATCTTTTATA AAATATGATGATATTCTTGAAATAGAATATGAACATAATTGTTCGAGGGTACAAAGTATT GGTTTAAAAAATAAAAATGAATGTAAATCATTTTGTTTAGAAAACTGGATTAAATGTAAG AATTACACTTCTCCTGGATATTGTTTGGCAACCTTATATTCTGGTGAAGATTGTTTCTTT TGCAGCATATAA
  • Download Fasta

  • Fasta :-

    MKPRIYLLLVSCAIFTINIHEINTQTSNPPNDIIDDVYTNVQNDNDKSNQDLDDEFQNGL NTSSGLSTNIGQTNVEKESDNNEKNESLNNETSYMKTLIKSSLSKNGKGIKVIGICDEDF RIYFAPYIWIYVTLSENIIKIEPENGVSTSINLNNLNNKCNDKKNDTFKLTAKIEEDILK IKWETHTNETDQNPKRDIKKFRLPDLSKGLTSIQIFTANAKENIIESKTYDIDNNIPEKC SVISANCFLGGSLNIESCYHCTLLAQKYPNDDECFNYISSELKNKINNDTIIKGEDDLDE NILRENIYKILKKMYNKDSDYCDNNRCNKKMITNIKELDTDLQIYLKNYCDILKKVDKSG TLDAHEIANEVEAFNNLIRLLNSHTNEKIYILYEKLRNPAICVKNINEWIIKKRGLVISN EYDINLHNVTQESNITNILNETYNEEDTEEIGNDIQNNEIDNENEIMDLKSLSNKKLASA YYTSSRYCNKDYCDRWKDKTSCISNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRS SALYVANCSQRKKSEICDIGSNPIEFLQILHDAKYLPLESNYPYSYYRVGGSCPRPKSDW TNLWGNNKLLYFKSRSIGFMSSYGFIAITSSNHIYDFDTYIQIIKNEVRNKGSVIAYIKT NGVIDYDFNGKIIHSLCGDDNDYADHAATIIGYGNYISESGEKRSYWLIRNSWGYYWGDE GNFKVDIYGPQHCKYNFIQTVVFFKLDLGVIEVPKKKNNQVYKYFSNNIPAFFTNIFYSN YNKRWDQFRSSEELNNYNNNISISGQTDNQINANNDFYNEDIDHINEISTSSKNISIQKK IDITHVLKYVKNNKTQTSFIKYDDILEIEYEHNCSRVQSIGLKNKNECKSFCLENWIKCK NYTSPGYCLATLYSGEDCFFCSI

  • title: active site
  • coordinates: Q511,C517,H686,N711
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0304800554 SQRKKSEICD0.996unspPBANKA_0304800683 YDDNDYADHA0.99unsp

PBANKA_030480      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India