PBANKA_0409700 | plasmepsin VI, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0409700OTHER0.5344210.4578610.007719
No Results

  • Fasta :-

    >PBANKA_0409700 MTNFCIKSYLFLYLSFLLFFDIITIFHVSSIRISTVLKNDKKKKNFNTSLVEENKKYLFN EIKLNNRFKNDIKGYIQNINNFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQ SFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDAKKSRTFMSNLKNKKESIYTYVQYGTGK SILEHGYDDVYMKGLKINKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEIN LLGILLPDKNFEICSNKKCRAAVDTGSSLITGPSSLMQPLIENINLEKDCSNISSLPIIS FVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMSLDIPPPRGPIFIFGNVFIRK YYTIFDNDHKLVGVVKSNHNF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0409700.fa Sequence name : PBANKA_0409700 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 4.666 CoefTot : 0.142 ChDiff : 0 ZoneTo : 39 KR : 3 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 2.365 0.310 0.872 MesoH : -0.553 0.351 -0.346 0.235 MuHd_075 : 20.637 13.454 6.746 3.952 MuHd_095 : 24.648 16.936 6.775 5.059 MuHd_100 : 25.091 18.151 7.048 5.820 MuHd_105 : 26.480 16.774 7.354 5.392 Hmax_075 : 19.600 19.400 4.758 6.907 Hmax_095 : 18.113 23.500 4.565 6.422 Hmax_100 : 19.000 23.500 4.565 7.420 Hmax_105 : 18.900 22.983 4.599 7.373 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9059 0.0941 DFMC : 0.9137 0.0863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 PBANKA_0409700 MTNFCIKSYLFLYLSFLLFFDIITIFHVSSIRISTVLKNDKKKKNFNTSLVEENKKYLFNEIKLNNRFKNDIKGYIQNIN 80 NFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQSFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDAKKSRTFM 160 SNLKNKKESIYTYVQYGTGKSILEHGYDDVYMKGLKINKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS 240 LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEINLLGILLPDKNFEICSNKKCR 320 AAVDTGSSLITGPSSLMQPLIENINLEKDCSNISSLPIISFVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMS 400 LDIPPPRGPIFIFGNVFIRKYYTIFDNDHKLVGVVKSNHNF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0409700 7 MTNFCIK|SY 0.071 . PBANKA_0409700 32 FHVSSIR|IS 0.073 . PBANKA_0409700 38 RISTVLK|ND 0.063 . PBANKA_0409700 41 TVLKNDK|KK 0.056 . PBANKA_0409700 42 VLKNDKK|KK 0.075 . PBANKA_0409700 43 LKNDKKK|KN 0.107 . PBANKA_0409700 44 KNDKKKK|NF 0.149 . PBANKA_0409700 55 SLVEENK|KY 0.057 . PBANKA_0409700 56 LVEENKK|YL 0.098 . PBANKA_0409700 63 YLFNEIK|LN 0.062 . PBANKA_0409700 67 EIKLNNR|FK 0.086 . PBANKA_0409700 69 KLNNRFK|ND 0.083 . PBANKA_0409700 73 RFKNDIK|GY 0.072 . PBANKA_0409700 89 HSIIESK|IP 0.062 . PBANKA_0409700 123 NPPQSFK|VV 0.088 . PBANKA_0409700 139 FAIPSTK|CV 0.080 . PBANKA_0409700 142 PSTKCVK|GG 0.061 . PBANKA_0409700 150 GCTLHNK|FD 0.066 . PBANKA_0409700 154 HNKFDAK|KS 0.071 . PBANKA_0409700 155 NKFDAKK|SR 0.100 . PBANKA_0409700 157 FDAKKSR|TF 0.116 . PBANKA_0409700 164 TFMSNLK|NK 0.059 . PBANKA_0409700 166 MSNLKNK|KE 0.076 . PBANKA_0409700 167 SNLKNKK|ES 0.086 . PBANKA_0409700 180 VQYGTGK|SI 0.081 . PBANKA_0409700 193 YDDVYMK|GL 0.066 . PBANKA_0409700 196 VYMKGLK|IN 0.057 . PBANKA_0409700 199 KGLKINK|QC 0.057 . PBANKA_0409700 236 DNSFQTK|YS 0.081 . PBANKA_0409700 239 FQTKYSK|SL 0.074 . PBANKA_0409700 246 SLIETIK|EQ 0.061 . PBANKA_0409700 262 FSFYVPK|EL 0.083 . PBANKA_0409700 266 VPKELEK|SG 0.067 . PBANKA_0409700 274 GAITFGR|AN 0.113 . PBANKA_0409700 278 FGRANSK|YA 0.092 . PBANKA_0409700 285 YAIEGEK|IE 0.053 . PBANKA_0409700 309 GILLPDK|NF 0.056 . PBANKA_0409700 317 FEICSNK|KC 0.068 . PBANKA_0409700 318 EICSNKK|CR 0.086 . PBANKA_0409700 320 CSNKKCR|AA 0.205 . PBANKA_0409700 348 ENINLEK|DC 0.066 . PBANKA_0409700 364 IISFVLK|NV 0.101 . PBANKA_0409700 369 LKNVEGK|TV 0.076 . PBANKA_0409700 407 LDIPPPR|GP 0.096 . PBANKA_0409700 419 FGNVFIR|KY 0.102 . PBANKA_0409700 420 GNVFIRK|YY 0.095 . PBANKA_0409700 430 IFDNDHK|LV 0.075 . PBANKA_0409700 436 KLVGVVK|SN 0.083 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0409700 ATGACAAATTTTTGTATTAAGTCTTATCTGTTTTTATATTTATCCTTTTTATTATTTTTT GATATAATCACAATATTCCATGTTTCATCGATAAGAATATCCACTGTTTTAAAAAATGAC AAAAAAAAAAAAAATTTTAACACTTCATTGGTGGAAGAAAATAAAAAATACCTTTTCAAT GAAATAAAATTAAATAATAGATTTAAAAATGATATAAAAGGATATATTCAAAATATCAAC AATTTCCATTCAATAATAGAAAGTAAAATACCAAATTCGTTACTATATGTTCACGAAGAC TTAATTAATTTTCACAATAGTCAATTTATTGGCGACATTGAAATTGGTAATCCTCCTCAA AGTTTTAAGGTTGTCTTTGATACAGGATCCAGTAACTTTGCAATTCCCTCAACGAAATGT GTCAAAGGAGGATGTACTTTACACAATAAATTCGATGCCAAGAAATCACGGACTTTTATG AGCAACTTGAAAAATAAAAAGGAGTCCATCTATACATATGTTCAATACGGAACAGGAAAA AGCATTCTCGAGCATGGATACGATGATGTGTATATGAAGGGATTAAAAATTAATAAACAA TGTATAGGATTAATAATCGAAGAATCTATGCACCCCTTCTCAGATTTACCGTTTGACGGA ATTGTTGGATTAGGATTTTCTGACCCGGATAATAGCTTCCAAACCAAATATTCTAAGTCC TTAATCGAAACAATTAAAGAGCAGAATCTTCTACAACAAAATATTTTTTCATTTTATGTT CCAAAGGAGTTGGAAAAATCAGGGGCAATTACATTTGGAAGGGCTAATAGCAAATATGCT ATAGAAGGAGAAAAAATCGAATGGTTTCCCGTTATATCAATGTACTTTTGGGAAATAAAT CTATTAGGGATATTGCTTCCAGACAAAAATTTCGAAATATGTTCAAATAAAAAATGCAGA GCAGCAGTCGATACCGGTTCCAGTTTGATAACTGGGCCATCGAGCCTTATGCAGCCATTA ATAGAAAACATAAATTTAGAAAAGGATTGTTCTAATATAAGTAGTTTACCGATTATTTCA TTTGTTTTAAAAAATGTCGAAGGGAAAACAGTTATACTAGATTTTACCCCAGACGATTAT ATTTTGCAAGAAAATAGTGAAGAGGATAATTCTTCTCAATGCGTAATTGGACTGATGTCC CTTGACATTCCACCACCCCGAGGTCCTATTTTCATTTTTGGCAATGTTTTCATTAGAAAA TATTACACAATATTTGACAATGACCATAAACTCGTTGGAGTAGTTAAAAGCAATCACAAT TTTTAA
  • Download Fasta

  • Fasta :-

    MTNFCIKSYLFLYLSFLLFFDIITIFHVSSIRISTVLKNDKKKKNFNTSLVEENKKYLFN EIKLNNRFKNDIKGYIQNINNFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQ SFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDAKKSRTFMSNLKNKKESIYTYVQYGTGK SILEHGYDDVYMKGLKINKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEIN LLGILLPDKNFEICSNKKCRAAVDTGSSLITGPSSLMQPLIENINLEKDCSNISSLPIIS FVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMSLDIPPPRGPIFIFGNVFIRK YYTIFDNDHKLVGVVKSNHNF

  • title: inhibitor binding site
  • coordinates: D127,G129,S131,K167,V174,Q175,I221
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0409700240 SKYSKSLIET0.991unspPBANKA_0409700386 SLQENSEEDN0.996unsp

PBANKA_040970      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India