PBANKA_0704400 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0704400OTHER0.9999850.0000010.000014
No Results

  • Fasta :-

    >PBANKA_0704400 MPRRYKVEIKDNNSDILEELEIQKMKKDNCRNESEINEKNENEISENNSINEKRTYKTIF KNIISPKNDNMPYDANDWNDKKKKKKKKTNKNENENETAKDKNNNDDEKFITYKIPKYLR KRNIKCPFIYKQVFYGKYGIVNYDLQGINKETLVITFHGLNGTNLTFLEIQKILIRYKFQ VLNFDLYGHGLSACPKYNHRNKTYGIDFFLSQTEELLTHLNLLNRNFYLIGFSMGCIIAT NFAKKYIKQVKKIILISPVGALEKKPFLVKLLKFFPCIINISSFFMLPYLISKRNFKKKK TNIANDMNSEDEASYYMYNRIMWQAFAKKNITHSILGCINNLKMWSSHEIFKEVGLHNIP VLILCGDKDNICSVHVLKNTSKLFANSHLIIFKNASHLVLVDKSKEINSCVLIFFLSSNN TNLKACQHMFPVGNIET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0704400.fa Sequence name : PBANKA_0704400 Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 3.380 CoefTot : -0.253 ChDiff : 25 ZoneTo : 7 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.788 1.759 0.296 0.688 MesoH : -0.004 0.867 -0.248 0.353 MuHd_075 : 14.107 8.614 2.546 3.693 MuHd_095 : 38.254 16.109 7.924 7.268 MuHd_100 : 32.978 13.146 6.878 6.406 MuHd_105 : 18.432 8.989 4.003 3.752 Hmax_075 : -9.712 1.662 -4.626 1.033 Hmax_095 : 1.663 4.200 -1.848 2.940 Hmax_100 : -0.900 2.500 -2.735 2.300 Hmax_105 : -9.683 -1.050 -3.717 1.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6985 0.3015 DFMC : 0.7497 0.2503
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 PBANKA_0704400 MPRRYKVEIKDNNSDILEELEIQKMKKDNCRNESEINEKNENEISENNSINEKRTYKTIFKNIISPKNDNMPYDANDWND 80 KKKKKKKKTNKNENENETAKDKNNNDDEKFITYKIPKYLRKRNIKCPFIYKQVFYGKYGIVNYDLQGINKETLVITFHGL 160 NGTNLTFLEIQKILIRYKFQVLNFDLYGHGLSACPKYNHRNKTYGIDFFLSQTEELLTHLNLLNRNFYLIGFSMGCIIAT 240 NFAKKYIKQVKKIILISPVGALEKKPFLVKLLKFFPCIINISSFFMLPYLISKRNFKKKKTNIANDMNSEDEASYYMYNR 320 IMWQAFAKKNITHSILGCINNLKMWSSHEIFKEVGLHNIPVLILCGDKDNICSVHVLKNTSKLFANSHLIIFKNASHLVL 400 VDKSKEINSCVLIFFLSSNNTNLKACQHMFPVGNIET 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0704400 3 ----MPR|RY 0.084 . PBANKA_0704400 4 ---MPRR|YK 0.138 . PBANKA_0704400 6 -MPRRYK|VE 0.089 . PBANKA_0704400 10 RYKVEIK|DN 0.071 . PBANKA_0704400 24 EELEIQK|MK 0.055 . PBANKA_0704400 26 LEIQKMK|KD 0.063 . PBANKA_0704400 27 EIQKMKK|DN 0.171 . PBANKA_0704400 31 MKKDNCR|NE 0.095 . PBANKA_0704400 39 ESEINEK|NE 0.058 . PBANKA_0704400 53 NNSINEK|RT 0.064 . PBANKA_0704400 54 NSINEKR|TY 0.248 . PBANKA_0704400 57 NEKRTYK|TI 0.151 . PBANKA_0704400 61 TYKTIFK|NI 0.059 . PBANKA_0704400 67 KNIISPK|ND 0.064 . PBANKA_0704400 81 ANDWNDK|KK 0.060 . PBANKA_0704400 82 NDWNDKK|KK 0.084 . PBANKA_0704400 83 DWNDKKK|KK 0.124 . PBANKA_0704400 84 WNDKKKK|KK 0.112 . PBANKA_0704400 85 NDKKKKK|KK 0.112 . PBANKA_0704400 86 DKKKKKK|KK 0.127 . PBANKA_0704400 87 KKKKKKK|KT 0.197 . PBANKA_0704400 88 KKKKKKK|TN 0.137 . PBANKA_0704400 91 KKKKTNK|NE 0.074 . PBANKA_0704400 100 NENETAK|DK 0.076 . PBANKA_0704400 102 NETAKDK|NN 0.066 . PBANKA_0704400 109 NNNDDEK|FI 0.080 . PBANKA_0704400 114 EKFITYK|IP 0.056 . PBANKA_0704400 117 ITYKIPK|YL 0.067 . PBANKA_0704400 120 KIPKYLR|KR 0.069 . PBANKA_0704400 121 IPKYLRK|RN 0.087 . PBANKA_0704400 122 PKYLRKR|NI 0.140 . PBANKA_0704400 125 LRKRNIK|CP 0.133 . PBANKA_0704400 131 KCPFIYK|QV 0.075 . PBANKA_0704400 137 KQVFYGK|YG 0.065 . PBANKA_0704400 150 DLQGINK|ET 0.062 . PBANKA_0704400 172 TFLEIQK|IL 0.060 . PBANKA_0704400 176 IQKILIR|YK 0.100 . PBANKA_0704400 178 KILIRYK|FQ 0.059 . PBANKA_0704400 196 GLSACPK|YN 0.082 . PBANKA_0704400 200 CPKYNHR|NK 0.094 . PBANKA_0704400 202 KYNHRNK|TY 0.079 . PBANKA_0704400 225 HLNLLNR|NF 0.094 . PBANKA_0704400 244 IATNFAK|KY 0.072 . PBANKA_0704400 245 ATNFAKK|YI 0.179 . PBANKA_0704400 248 FAKKYIK|QV 0.083 . PBANKA_0704400 251 KYIKQVK|KI 0.067 . PBANKA_0704400 252 YIKQVKK|II 0.105 . PBANKA_0704400 264 PVGALEK|KP 0.055 . PBANKA_0704400 265 VGALEKK|PF 0.085 . PBANKA_0704400 270 KKPFLVK|LL 0.056 . PBANKA_0704400 273 FLVKLLK|FF 0.065 . PBANKA_0704400 293 LPYLISK|RN 0.064 . PBANKA_0704400 294 PYLISKR|NF 0.131 . PBANKA_0704400 297 ISKRNFK|KK 0.127 . PBANKA_0704400 298 SKRNFKK|KK 0.128 . PBANKA_0704400 299 KRNFKKK|KT 0.223 . PBANKA_0704400 300 RNFKKKK|TN 0.138 . PBANKA_0704400 320 SYYMYNR|IM 0.096 . PBANKA_0704400 328 MWQAFAK|KN 0.073 . PBANKA_0704400 329 WQAFAKK|NI 0.116 . PBANKA_0704400 343 GCINNLK|MW 0.069 . PBANKA_0704400 352 SSHEIFK|EV 0.087 . PBANKA_0704400 368 LILCGDK|DN 0.061 . PBANKA_0704400 378 CSVHVLK|NT 0.072 . PBANKA_0704400 382 VLKNTSK|LF 0.058 . PBANKA_0704400 393 SHLIIFK|NA 0.067 . PBANKA_0704400 403 HLVLVDK|SK 0.081 . PBANKA_0704400 405 VLVDKSK|EI 0.068 . PBANKA_0704400 424 SNNTNLK|AC 0.071 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0704400 ATGCCACGACGATACAAAGTTGAAATAAAAGACAATAATAGTGACATATTAGAAGAATTA GAGATCCAAAAAATGAAGAAAGACAATTGTAGAAATGAAAGCGAAATAAACGAAAAGAAT GAAAATGAAATAAGCGAAAATAATAGCATAAATGAAAAACGAACTTACAAAACAATTTTT AAAAATATAATTTCACCAAAAAATGATAATATGCCCTATGATGCAAATGATTGGAATGAT AAAAAAAAAAAAAAAAAAAAAAAAACGAACAAGAATGAAAATGAAAATGAAACAGCGAAA GATAAAAATAATAATGATGATGAAAAGTTTATTACATATAAAATACCAAAATATTTAAGG AAAAGAAACATTAAATGCCCATTTATATATAAACAAGTATTTTATGGAAAATATGGCATA GTGAACTATGATTTACAGGGAATCAATAAAGAAACATTAGTTATAACCTTTCATGGGTTG AATGGTACTAACTTAACATTTTTAGAAATTCAAAAAATATTAATTCGATATAAATTTCAA GTTCTTAATTTTGATTTATATGGACACGGATTATCGGCATGCCCAAAATATAATCATAGA AACAAAACATATGGAATTGATTTCTTTTTATCTCAAACTGAAGAATTATTAACTCATTTA AATTTATTAAACAGAAATTTTTATTTAATTGGCTTTTCTATGGGGTGTATTATTGCTACT AATTTTGCAAAAAAATATATTAAACAAGTAAAAAAAATTATTTTAATATCACCTGTTGGG GCTTTAGAAAAAAAACCCTTTTTGGTAAAATTATTAAAATTTTTCCCGTGCATAATTAAC ATATCCTCTTTCTTTATGTTACCATATCTTATTTCAAAACGAAATTTCAAAAAAAAAAAA ACAAACATTGCCAACGATATGAATTCAGAAGATGAGGCATCTTATTATATGTATAATCGA ATAATGTGGCAAGCTTTTGCTAAAAAAAATATTACTCATTCTATTTTAGGATGTATTAAT AACTTAAAAATGTGGAGTTCCCATGAAATATTTAAAGAAGTTGGTCTTCATAATATACCA GTTTTGATTTTATGTGGAGATAAAGATAATATATGTAGTGTGCATGTACTTAAAAATACA TCTAAGCTTTTTGCTAATTCTCATCTTATAATATTTAAAAATGCTTCGCATCTAGTTCTT GTGGATAAAAGCAAAGAAATTAATTCATGTGTTCTTATATTTTTCCTATCCTCAAATAAT ACAAATTTGAAAGCATGCCAACATATGTTTCCAGTTGGTAATATAGAAACATAA
  • Download Fasta

  • Fasta :-

    MPRRYKVEIKDNNSDILEELEIQKMKKDNCRNESEINEKNENEISENNSINEKRTYKTIF KNIISPKNDNMPYDANDWNDKKKKKKKKTNKNENENETAKDKNNNDDEKFITYKIPKYLR KRNIKCPFIYKQVFYGKYGIVNYDLQGINKETLVITFHGLNGTNLTFLEIQKILIRYKFQ VLNFDLYGHGLSACPKYNHRNKTYGIDFFLSQTEELLTHLNLLNRNFYLIGFSMGCIIAT NFAKKYIKQVKKIILISPVGALEKKPFLVKLLKFFPCIINISSFFMLPYLISKRNFKKKK TNIANDMNSEDEASYYMYNRIMWQAFAKKNITHSILGCINNLKMWSSHEIFKEVGLHNIP VLILCGDKDNICSVHVLKNTSKLFANSHLIIFKNASHLVLVDKSKEINSCVLIFFLSSNN TNLKACQHMFPVGNIET

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PBANKA_070440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India