PBANKA_0712200 | BEM46-like protein, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0712200OTHER0.5738490.4221180.004033
No Results

  • Fasta :-

    >PBANKA_0712200 MVLKQVIISIIVAVIASIALINTYIYFSQDNLIFVKKDIDPIYNKPLGDNYEEVMIKTED GHQNKCWFIKAKDYESKPVILYFLGNGSYVEKNVNIFNLMVGRVDVSIFSCSNRGTGDNT LSPSEAAFYKDAQSYLNYLKMKNMKNIFLFGTSMGCAVAIETAMNNPNSISGLIVQNPFL SMKEMAKLAKPFLFFIILSYDLIIRTKMNNEEKIKKNRVPILFNISEKDKIVPPEHGKKL HEICPSKKFIYTAKDGEHNDILVNDDGSYHRSMKIFIETVNSTYSKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0712200.fa Sequence name : PBANKA_0712200 Sequence length : 287 VALUES OF COMPUTED PARAMETERS Coef20 : 4.959 CoefTot : 0.132 ChDiff : 6 ZoneTo : 29 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.012 2.835 0.490 0.878 MesoH : -0.045 0.577 -0.314 0.301 MuHd_075 : 18.027 18.026 5.712 5.501 MuHd_095 : 17.389 22.248 6.214 6.406 MuHd_100 : 10.725 13.658 4.046 4.028 MuHd_105 : 12.393 16.146 4.999 4.849 Hmax_075 : 17.150 28.100 5.495 8.720 Hmax_095 : 20.563 30.363 6.055 9.013 Hmax_100 : 18.700 25.900 5.457 7.920 Hmax_105 : 21.200 31.200 6.547 9.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7086 0.2914 DFMC : 0.9351 0.0649
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 287 PBANKA_0712200 MVLKQVIISIIVAVIASIALINTYIYFSQDNLIFVKKDIDPIYNKPLGDNYEEVMIKTEDGHQNKCWFIKAKDYESKPVI 80 LYFLGNGSYVEKNVNIFNLMVGRVDVSIFSCSNRGTGDNTLSPSEAAFYKDAQSYLNYLKMKNMKNIFLFGTSMGCAVAI 160 ETAMNNPNSISGLIVQNPFLSMKEMAKLAKPFLFFIILSYDLIIRTKMNNEEKIKKNRVPILFNISEKDKIVPPEHGKKL 240 HEICPSKKFIYTAKDGEHNDILVNDDGSYHRSMKIFIETVNSTYSKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0712200 4 ---MVLK|QV 0.079 . PBANKA_0712200 36 DNLIFVK|KD 0.057 . PBANKA_0712200 37 NLIFVKK|DI 0.199 . PBANKA_0712200 45 IDPIYNK|PL 0.068 . PBANKA_0712200 57 YEEVMIK|TE 0.061 . PBANKA_0712200 65 EDGHQNK|CW 0.071 . PBANKA_0712200 70 NKCWFIK|AK 0.073 . PBANKA_0712200 72 CWFIKAK|DY 0.097 . PBANKA_0712200 77 AKDYESK|PV 0.077 . PBANKA_0712200 92 NGSYVEK|NV 0.087 . PBANKA_0712200 103 FNLMVGR|VD 0.074 . PBANKA_0712200 114 IFSCSNR|GT 0.188 . PBANKA_0712200 130 SEAAFYK|DA 0.100 . PBANKA_0712200 140 SYLNYLK|MK 0.056 . PBANKA_0712200 142 LNYLKMK|NM 0.070 . PBANKA_0712200 145 LKMKNMK|NI 0.075 . PBANKA_0712200 183 NPFLSMK|EM 0.061 . PBANKA_0712200 187 SMKEMAK|LA 0.070 . PBANKA_0712200 190 EMAKLAK|PF 0.061 . PBANKA_0712200 205 SYDLIIR|TK 0.072 . PBANKA_0712200 207 DLIIRTK|MN 0.061 . PBANKA_0712200 213 KMNNEEK|IK 0.063 . PBANKA_0712200 215 NNEEKIK|KN 0.059 . PBANKA_0712200 216 NEEKIKK|NR 0.090 . PBANKA_0712200 218 EKIKKNR|VP 0.077 . PBANKA_0712200 228 LFNISEK|DK 0.072 . PBANKA_0712200 230 NISEKDK|IV 0.084 . PBANKA_0712200 238 VPPEHGK|KL 0.069 . PBANKA_0712200 239 PPEHGKK|LH 0.086 . PBANKA_0712200 247 HEICPSK|KF 0.058 . PBANKA_0712200 248 EICPSKK|FI 0.150 . PBANKA_0712200 254 KFIYTAK|DG 0.078 . PBANKA_0712200 271 DDGSYHR|SM 0.110 . PBANKA_0712200 274 SYHRSMK|IF 0.161 . PBANKA_0712200 286 VNSTYSK|K- 0.070 . PBANKA_0712200 287 NSTYSKK|-- 0.108 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0712200 ATGGTACTTAAACAAGTGATAATATCCATCATAGTTGCTGTCATAGCATCCATAGCTTTG ATAAACACATATATATACTTTAGCCAGGATAATCTTATTTTCGTAAAAAAAGACATCGAT CCCATATATAACAAACCCTTAGGAGATAATTATGAAGAAGTTATGATAAAAACCGAAGAT GGACATCAAAATAAATGTTGGTTCATAAAAGCAAAAGATTATGAAAGCAAACCAGTTATT CTTTATTTTCTTGGAAATGGAAGTTACGTAGAAAAGAATGTTAATATATTCAATTTGATG GTTGGAAGAGTAGATGTGAGCATTTTCTCGTGTTCAAATCGAGGTACCGGGGATAATACG CTTAGCCCATCAGAAGCTGCATTTTACAAAGACGCTCAATCATACTTAAATTATCTTAAA ATGAAAAATATGAAAAATATATTTTTATTTGGAACGTCTATGGGATGTGCTGTTGCTATT GAAACTGCTATGAATAATCCGAATAGTATATCGGGTTTAATTGTTCAAAACCCATTTTTA AGCATGAAAGAAATGGCAAAGCTTGCAAAACCATTCCTATTTTTTATTATTTTATCTTAT GATTTAATAATAAGAACAAAGATGAATAATGAGGAAAAAATAAAGAAGAATCGCGTTCCA ATTTTGTTTAATATTTCTGAAAAGGATAAAATCGTTCCCCCAGAACATGGAAAAAAATTA CATGAGATATGCCCAAGCAAAAAGTTTATTTATACTGCAAAAGACGGAGAGCATAATGAC ATTCTTGTAAATGATGATGGATCATATCATCGATCAATGAAAATATTTATTGAAACAGTC AACTCTACATATAGCAAAAAATAA
  • Download Fasta

  • Fasta :-

    MVLKQVIISIIVAVIASIALINTYIYFSQDNLIFVKKDIDPIYNKPLGDNYEEVMIKTED GHQNKCWFIKAKDYESKPVILYFLGNGSYVEKNVNIFNLMVGRVDVSIFSCSNRGTGDNT LSPSEAAFYKDAQSYLNYLKMKNMKNIFLFGTSMGCAVAIETAMNNPNSISGLIVQNPFL SMKEMAKLAKPFLFFIILSYDLIIRTKMNNEEKIKKNRVPILFNISEKDKIVPPEHGKKL HEICPSKKFIYTAKDGEHNDILVNDDGSYHRSMKIFIETVNSTYSKK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0712200122 SDNTLSPSEA0.992unspPBANKA_0712200226 SLFNISEKDK0.994unsp

PBANKA_071220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India